Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_929

Experiment: Putrescine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Putrescine (C)
1,040,547	+		PfGW456L13_928	0.29	-2.1
1,040,623	+		PfGW456L13_928	0.36	-1.0
1,040,623	+		PfGW456L13_928	0.36	-2.4
1,040,623	+		PfGW456L13_928	0.36	-2.1
1,040,623	+		PfGW456L13_928	0.36	-2.3
1,040,803	+		PfGW456L13_928	0.52	-1.7
1,040,804	-		PfGW456L13_928	0.52	-2.3
1,040,885	+		PfGW456L13_928	0.59	-1.5
1,040,885	+		PfGW456L13_928	0.59	-2.7
1,040,890	+		PfGW456L13_928	0.60	-1.8
1,040,890	+		PfGW456L13_928	0.60	-1.1
1,040,890	+		PfGW456L13_928	0.60	-2.3
1,040,890	+		PfGW456L13_928	0.60	-1.8
1,040,891	-		PfGW456L13_928	0.60	+0.3
1,040,891	-		PfGW456L13_928	0.60	+1.3
1,040,891	-		PfGW456L13_928	0.60	-0.6
1,040,891	-		PfGW456L13_928	0.60	+0.1
1,040,908	+		PfGW456L13_928	0.61	-1.0
1,040,908	+		PfGW456L13_928	0.61	-1.8
1,040,908	+		PfGW456L13_928	0.61	-2.4
1,040,909	-		PfGW456L13_928	0.62	-2.0
1,040,909	-		PfGW456L13_928	0.62	-0.4
1,040,909	-		PfGW456L13_928	0.62	-1.9
1,040,909	-		PfGW456L13_928	0.62	-0.5
1,040,909	-		PfGW456L13_928	0.62	-0.6
1,040,909	-		PfGW456L13_928	0.62	-0.2
1,040,968	+		PfGW456L13_928	0.67	-1.2
1,040,968	+		PfGW456L13_928	0.67	-2.5
1,040,968	+		PfGW456L13_928	0.67	-0.3
1,040,968	+		PfGW456L13_928	0.67	-1.4
1,040,969	-		PfGW456L13_928	0.67	-1.1
1,041,019	+		PfGW456L13_928	0.71	-2.3
1,041,019	+		PfGW456L13_928	0.71	-1.4
1,041,019	+		PfGW456L13_928	0.71	-2.6
1,041,020	-		PfGW456L13_928	0.72	-1.6
1,041,020	-		PfGW456L13_928	0.72	-1.3
1,041,052	+		PfGW456L13_928	0.74	-1.3
1,041,052	+		PfGW456L13_928	0.74	-2.7
1,041,052	+		PfGW456L13_928	0.74	-0.5
1,041,052	+		PfGW456L13_928	0.74	-1.5
1,041,052	+		PfGW456L13_928	0.74	-2.9
1,041,052	+		PfGW456L13_928	0.74	-0.2
1,041,053	-		PfGW456L13_928	0.74	+0.5
1,041,053	-		PfGW456L13_928	0.74	-0.7
1,041,072	+		PfGW456L13_928	0.76	-1.5
1,041,100	+		PfGW456L13_928	0.79	-0.5
1,041,100	+		PfGW456L13_928	0.79	-1.8
1,041,101	-		PfGW456L13_928	0.79	-0.3
1,041,259	+				-1.7
1,041,259	+				-0.7
1,041,334	+				+1.9
1,041,334	+				+0.2
1,041,334	+				+3.4
1,041,335	-				-0.3
1,041,392	+				-1.5
1,041,392	+				+1.2
1,041,393	-				-0.2
1,041,396	+				+1.3
1,041,396	+				-0.6
1,041,396	+				-2.2
1,041,396	+				-1.3
1,041,397	-				-2.2
1,041,397	-				-1.9
1,041,480	+				-2.7
1,041,480	+				-1.0
1,041,480	+				-1.4
1,041,481	-				+0.1
1,041,481	-				-1.2
1,041,506	-				+0.6
1,041,530	+				-0.1
1,041,539	+				-0.7
1,041,539	+				-1.9
1,041,539	+				-1.6
1,041,539	+				-1.1
1,041,540	-				-0.5
1,041,614	+				-1.6
1,041,614	+				+0.3
1,041,614	+				-2.2
1,041,614	+				-1.2
1,041,615	-				-0.5
1,041,615	-				-1.1
1,041,615	-				+1.1
1,041,615	-				+0.7
1,041,615	-				-0.8
1,041,615	-				+0.1
1,041,618	+				-2.7
1,041,618	+				-2.7
1,041,618	+				-1.7
1,041,618	+				+0.1
1,041,618	+				-1.3
1,041,618	+				-1.0
1,041,618	+				-0.6
1,041,619	-				-2.6
1,041,619	-				-0.4
1,041,619	-				-0.6
1,041,619	-				-1.1
1,041,633	+				+0.9
1,041,633	+				+2.3
1,041,690	+		PfGW456L13_929	0.14	-2.1
1,041,691	-		PfGW456L13_929	0.14	-0.1
1,041,725	+		PfGW456L13_929	0.17	+0.5
1,041,725	+		PfGW456L13_929	0.17	-1.9
1,041,725	+		PfGW456L13_929	0.17	+1.3
1,041,840	+		PfGW456L13_929	0.28	+0.5
1,041,840	+		PfGW456L13_929	0.28	-0.6
1,041,841	-		PfGW456L13_929	0.28	-1.0
1,041,900	+		PfGW456L13_929	0.33	-3.2
1,041,977	+		PfGW456L13_929	0.40	-2.1
1,042,089	+		PfGW456L13_929	0.51	-1.5
1,042,089	+		PfGW456L13_929	0.51	-1.8
1,042,089	+		PfGW456L13_929	0.51	-3.1
1,042,089	+		PfGW456L13_929	0.51	-0.2
1,042,089	+		PfGW456L13_929	0.51	-1.1
1,042,089	+		PfGW456L13_929	0.51	-1.8
1,042,089	+		PfGW456L13_929	0.51	-0.9
1,042,089	+		PfGW456L13_929	0.51	-1.1
1,042,089	+		PfGW456L13_929	0.51	-1.8
1,042,090	-		PfGW456L13_929	0.51	+0.3
1,042,090	-		PfGW456L13_929	0.51	-1.3
1,042,090	-		PfGW456L13_929	0.51	+0.9
1,042,090	-		PfGW456L13_929	0.51	+0.5
1,042,167	+		PfGW456L13_929	0.58	-2.2
1,042,167	+		PfGW456L13_929	0.58	-2.5
1,042,167	+		PfGW456L13_929	0.58	-0.4
1,042,167	+		PfGW456L13_929	0.58	-1.7
1,042,168	-		PfGW456L13_929	0.58	-1.1
1,042,168	-		PfGW456L13_929	0.58	-0.7
1,042,168	-		PfGW456L13_929	0.58	-0.3
1,042,168	-		PfGW456L13_929	0.58	-1.2
1,042,168	-		PfGW456L13_929	0.58	-0.1
1,042,176	+		PfGW456L13_929	0.59	-1.3
1,042,176	+		PfGW456L13_929	0.59	-0.4
1,042,176	+		PfGW456L13_929	0.59	-0.6
1,042,176	+		PfGW456L13_929	0.59	-1.9
1,042,176	+		PfGW456L13_929	0.59	-1.5
1,042,177	-		PfGW456L13_929	0.59	-2.4
1,042,177	-		PfGW456L13_929	0.59	-0.7
1,042,177	-		PfGW456L13_929	0.59	-0.8
1,042,177	-		PfGW456L13_929	0.59	+0.9
1,042,177	-		PfGW456L13_929	0.59	-2.5
1,042,195	-		PfGW456L13_929	0.60	-1.0
1,042,195	-		PfGW456L13_929	0.60	-1.5
1,042,220	+		PfGW456L13_929	0.63	+0.4
1,042,221	-		PfGW456L13_929	0.63	+0.5
1,042,401	+		PfGW456L13_929	0.80	-0.2
1,042,401	+		PfGW456L13_929	0.80	-0.0
1,042,401	+		PfGW456L13_929	0.80	+1.3
1,042,402	-		PfGW456L13_929	0.80	-2.3
1,042,402	-		PfGW456L13_929	0.80	-1.7
1,042,402	-		PfGW456L13_929	0.80	-2.2
1,042,402	-		PfGW456L13_929	0.80	-0.7
1,042,402	-		PfGW456L13_929	0.80	-0.8
1,042,402	-		PfGW456L13_929	0.80	-2.1
1,042,440	+		PfGW456L13_929	0.83	+0.9
1,042,441	-		PfGW456L13_929	0.83	-1.9
1,042,515	+				+3.6
1,042,545	+				+1.7
1,042,545	+				+2.1
1,042,545	+				+0.8
1,042,545	+				-2.2
1,042,546	-				+0.4
1,042,572	-				+0.3
1,042,572	-				-0.7
1,042,620	+				-2.3
1,042,620	+				-1.6
1,042,620	+				-0.3
1,042,621	-				+0.1
1,042,621	-				-0.9
1,042,621	-				-0.6
1,042,638	+				-2.2
1,042,638	+				-1.9
1,042,638	+				-0.1
1,042,639	-				+0.5
1,042,639	-				-0.5
1,042,693	-				+0.3
1,042,716	+				-0.4
1,042,717	-				+0.7
1,042,718	+				-1.4
1,042,718	+				-1.8
1,042,718	+				-1.6
1,042,718	+				-2.5
1,042,718	+				-0.5
1,042,718	+				-0.4
1,042,719	-				-1.7
1,042,719	-				-1.5
1,042,749	-				-1.4
1,042,946	-		PfGW456L13_930	0.22	-0.2
1,042,958	+		PfGW456L13_930	0.23	-3.2
1,042,959	-		PfGW456L13_930	0.23	-1.8
1,042,968	+		PfGW456L13_930	0.24	-1.6
1,042,968	+		PfGW456L13_930	0.24	-1.1
1,043,001	+		PfGW456L13_930	0.27	-0.1
1,043,002	-		PfGW456L13_930	0.27	-2.5
1,043,113	+		PfGW456L13_930	0.37	-0.5
1,043,127	+		PfGW456L13_930	0.38	+0.9
1,043,415	+		PfGW456L13_930	0.63	-2.2
1,043,415	+		PfGW456L13_930	0.63	-0.5
1,043,415	+		PfGW456L13_930	0.63	-0.9
1,043,416	-		PfGW456L13_930	0.63	+0.7
1,043,416	-		PfGW456L13_930	0.63	-0.4
1,043,416	-		PfGW456L13_930	0.63	-1.2
1,043,416	-		PfGW456L13_930	0.63	-2.1
1,043,513	+		PfGW456L13_930	0.72	-1.9
1,043,514	-		PfGW456L13_930	0.72	-2.9
1,043,541	+		PfGW456L13_930	0.74	-2.7
1,043,541	+		PfGW456L13_930	0.74	-0.8
1,043,541	+		PfGW456L13_930	0.74	-2.5
1,043,541	+		PfGW456L13_930	0.74	-1.1
1,043,542	-		PfGW456L13_930	0.74	+1.3
1,043,542	-		PfGW456L13_930	0.74	+0.2
1,043,542	-		PfGW456L13_930	0.74	-0.4
1,043,589	+		PfGW456L13_930	0.78	-0.2
1,043,590	-		PfGW456L13_930	0.78	-1.8
1,043,590	-		PfGW456L13_930	0.78	-0.2
1,043,590	-		PfGW456L13_930	0.78	-0.2