Experiment: Putrescine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_911 and PfGW456L13_912 are separated by 157 nucleotides PfGW456L13_912 and PfGW456L13_913 are separated by 245 nucleotides
PfGW456L13_911 - Adenylate cyclase (EC 4.6.1.1), at 1,019,390 to 1,020,757
_911
PfGW456L13_912 - Acetylornithine deacetylase (EC 3.5.1.16), at 1,020,915 to 1,022,063
_912
PfGW456L13_913 - N-acetylglutamate synthase (EC 2.3.1.1), at 1,022,309 to 1,023,607
_913
Position (kb)
1020
1021
1022
1023 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1020.021 kb on + strand, within PfGW456L13_911 at 1020.021 kb on + strand, within PfGW456L13_911 at 1020.022 kb on - strand, within PfGW456L13_911 at 1020.132 kb on + strand, within PfGW456L13_911 at 1020.132 kb on + strand, within PfGW456L13_911 at 1020.132 kb on + strand, within PfGW456L13_911 at 1020.133 kb on - strand, within PfGW456L13_911 at 1020.133 kb on - strand, within PfGW456L13_911 at 1020.133 kb on - strand, within PfGW456L13_911 at 1020.147 kb on + strand, within PfGW456L13_911 at 1020.147 kb on + strand, within PfGW456L13_911 at 1020.147 kb on + strand, within PfGW456L13_911 at 1020.147 kb on + strand, within PfGW456L13_911 at 1020.501 kb on + strand, within PfGW456L13_911 at 1020.501 kb on + strand, within PfGW456L13_911 at 1020.502 kb on - strand, within PfGW456L13_911 at 1020.633 kb on + strand at 1020.633 kb on + strand at 1020.633 kb on + strand at 1020.633 kb on + strand at 1020.634 kb on - strand at 1020.634 kb on - strand at 1020.822 kb on + strand at 1020.823 kb on - strand at 1020.823 kb on - strand at 1020.823 kb on - strand at 1020.837 kb on + strand at 1020.838 kb on - strand at 1020.838 kb on - strand at 1020.840 kb on + strand at 1020.840 kb on + strand at 1020.857 kb on + strand at 1020.857 kb on + strand at 1020.857 kb on + strand at 1020.857 kb on + strand at 1020.858 kb on - strand at 1020.858 kb on - strand at 1020.879 kb on + strand at 1020.879 kb on + strand at 1020.879 kb on + strand at 1020.879 kb on + strand at 1020.879 kb on + strand at 1020.879 kb on + strand at 1020.879 kb on + strand at 1020.879 kb on + strand at 1020.879 kb on + strand at 1020.879 kb on + strand at 1020.880 kb on - strand at 1020.880 kb on - strand at 1020.880 kb on - strand at 1020.880 kb on - strand at 1020.880 kb on - strand at 1021.052 kb on + strand, within PfGW456L13_912 at 1021.053 kb on - strand, within PfGW456L13_912 at 1021.053 kb on - strand, within PfGW456L13_912 at 1021.568 kb on - strand, within PfGW456L13_912 at 1021.568 kb on - strand, within PfGW456L13_912 at 1021.785 kb on + strand, within PfGW456L13_912 at 1021.786 kb on - strand, within PfGW456L13_912 at 1021.908 kb on + strand, within PfGW456L13_912 at 1021.908 kb on + strand, within PfGW456L13_912 at 1021.908 kb on + strand, within PfGW456L13_912 at 1021.908 kb on + strand, within PfGW456L13_912 at 1021.909 kb on - strand, within PfGW456L13_912 at 1021.909 kb on - strand, within PfGW456L13_912 at 1021.909 kb on - strand, within PfGW456L13_912 at 1021.909 kb on - strand, within PfGW456L13_912 at 1021.956 kb on - strand at 1021.984 kb on - strand at 1022.009 kb on + strand at 1022.009 kb on + strand at 1022.010 kb on - strand at 1022.010 kb on - strand at 1022.020 kb on + strand at 1022.020 kb on + strand at 1022.020 kb on + strand at 1022.020 kb on + strand at 1022.020 kb on + strand at 1022.020 kb on + strand at 1022.020 kb on + strand at 1022.020 kb on + strand at 1022.020 kb on + strand at 1022.020 kb on + strand at 1022.020 kb on + strand at 1022.020 kb on + strand at 1022.020 kb on + strand at 1022.020 kb on + strand at 1022.020 kb on + strand at 1022.020 kb on + strand at 1022.020 kb on + strand at 1022.020 kb on + strand at 1022.020 kb on + strand at 1022.020 kb on + strand at 1022.021 kb on - strand at 1022.021 kb on - strand at 1022.021 kb on - strand at 1022.021 kb on - strand at 1022.021 kb on - strand at 1022.021 kb on - strand at 1022.021 kb on - strand at 1022.021 kb on - strand at 1022.021 kb on - strand at 1022.021 kb on - strand at 1022.021 kb on - strand at 1022.021 kb on - strand at 1022.021 kb on - strand at 1022.021 kb on - strand at 1022.021 kb on - strand at 1022.021 kb on - strand at 1022.023 kb on + strand at 1022.024 kb on - strand at 1022.024 kb on - strand at 1022.024 kb on - strand at 1022.043 kb on + strand at 1022.043 kb on + strand at 1022.043 kb on + strand at 1022.043 kb on + strand at 1022.043 kb on + strand at 1022.044 kb on - strand at 1022.044 kb on - strand at 1022.044 kb on - strand at 1022.044 kb on - strand at 1022.044 kb on - strand at 1022.061 kb on + strand at 1022.061 kb on + strand at 1022.061 kb on + strand at 1022.131 kb on - strand at 1022.131 kb on - strand at 1022.156 kb on - strand at 1022.156 kb on - strand at 1022.171 kb on + strand at 1022.171 kb on + strand at 1022.287 kb on + strand at 1022.287 kb on + strand at 1022.287 kb on + strand at 1022.288 kb on - strand at 1022.288 kb on - strand at 1022.291 kb on + strand at 1022.291 kb on + strand at 1022.291 kb on + strand at 1022.291 kb on + strand at 1022.291 kb on + strand at 1022.291 kb on + strand at 1022.292 kb on - strand at 1022.292 kb on - strand at 1022.292 kb on - strand at 1022.294 kb on + strand at 1022.294 kb on + strand at 1022.294 kb on + strand at 1022.318 kb on + strand at 1022.318 kb on + strand at 1022.319 kb on - strand at 1022.319 kb on - strand at 1022.348 kb on + strand at 1022.348 kb on + strand at 1022.348 kb on + strand at 1022.349 kb on - strand at 1022.426 kb on - strand at 1022.426 kb on - strand at 1022.604 kb on + strand, within PfGW456L13_913 at 1022.604 kb on + strand, within PfGW456L13_913 at 1022.604 kb on + strand, within PfGW456L13_913 at 1022.605 kb on - strand, within PfGW456L13_913 at 1022.605 kb on - strand, within PfGW456L13_913 at 1022.605 kb on - strand, within PfGW456L13_913 at 1023.010 kb on + strand, within PfGW456L13_913 at 1023.010 kb on + strand, within PfGW456L13_913 at 1023.014 kb on + strand, within PfGW456L13_913 at 1023.014 kb on + strand, within PfGW456L13_913 at 1023.014 kb on + strand, within PfGW456L13_913 at 1023.014 kb on + strand, within PfGW456L13_913 at 1023.014 kb on + strand, within PfGW456L13_913 at 1023.014 kb on + strand, within PfGW456L13_913 at 1023.015 kb on + strand, within PfGW456L13_913 at 1023.015 kb on - strand, within PfGW456L13_913 at 1023.015 kb on - strand, within PfGW456L13_913 at 1023.015 kb on - strand, within PfGW456L13_913
Per-strain Table
Position Strand Gene LocusTag Fraction Putrescine (C) remove 1,020,021 + PfGW456L13_911 0.46 -0.1 1,020,021 + PfGW456L13_911 0.46 -0.2 1,020,022 - PfGW456L13_911 0.46 -0.4 1,020,132 + PfGW456L13_911 0.54 +0.8 1,020,132 + PfGW456L13_911 0.54 +0.7 1,020,132 + PfGW456L13_911 0.54 -1.3 1,020,133 - PfGW456L13_911 0.54 +1.1 1,020,133 - PfGW456L13_911 0.54 -0.0 1,020,133 - PfGW456L13_911 0.54 -3.5 1,020,147 + PfGW456L13_911 0.55 -1.1 1,020,147 + PfGW456L13_911 0.55 -1.8 1,020,147 + PfGW456L13_911 0.55 -0.8 1,020,147 + PfGW456L13_911 0.55 +1.7 1,020,501 + PfGW456L13_911 0.81 +0.3 1,020,501 + PfGW456L13_911 0.81 +0.3 1,020,502 - PfGW456L13_911 0.81 +0.6 1,020,633 + +0.0 1,020,633 + -0.4 1,020,633 + -1.4 1,020,633 + -0.2 1,020,634 - -0.4 1,020,634 - -0.8 1,020,822 + -0.3 1,020,823 - -0.5 1,020,823 - +0.5 1,020,823 - -0.6 1,020,837 + +0.7 1,020,838 - +1.1 1,020,838 - -1.9 1,020,840 + +0.3 1,020,840 + +0.3 1,020,857 + -0.3 1,020,857 + +0.0 1,020,857 + -0.1 1,020,857 + -0.5 1,020,858 - -1.5 1,020,858 - +0.9 1,020,879 + -2.2 1,020,879 + +0.6 1,020,879 + -0.8 1,020,879 + -0.0 1,020,879 + -0.9 1,020,879 + +0.1 1,020,879 + +3.3 1,020,879 + -0.3 1,020,879 + +0.4 1,020,879 + -0.7 1,020,880 - -1.6 1,020,880 - +1.6 1,020,880 - -0.4 1,020,880 - -0.3 1,020,880 - -2.4 1,021,052 + PfGW456L13_912 0.12 -0.4 1,021,053 - PfGW456L13_912 0.12 -0.4 1,021,053 - PfGW456L13_912 0.12 -0.3 1,021,568 - PfGW456L13_912 0.57 -0.3 1,021,568 - PfGW456L13_912 0.57 +0.2 1,021,785 + PfGW456L13_912 0.76 +0.6 1,021,786 - PfGW456L13_912 0.76 +0.0 1,021,908 + PfGW456L13_912 0.86 +1.6 1,021,908 + PfGW456L13_912 0.86 -2.1 1,021,908 + PfGW456L13_912 0.86 -1.8 1,021,908 + PfGW456L13_912 0.86 +0.3 1,021,909 - PfGW456L13_912 0.87 -0.8 1,021,909 - PfGW456L13_912 0.87 -2.0 1,021,909 - PfGW456L13_912 0.87 -0.3 1,021,909 - PfGW456L13_912 0.87 -2.0 1,021,956 - +0.1 1,021,984 - +0.5 1,022,009 + -1.1 1,022,009 + +1.7 1,022,010 - +0.0 1,022,010 - -1.7 1,022,020 + +0.7 1,022,020 + -0.1 1,022,020 + -1.5 1,022,020 + -0.5 1,022,020 + -1.5 1,022,020 + +0.5 1,022,020 + +0.8 1,022,020 + +1.8 1,022,020 + -0.8 1,022,020 + -0.5 1,022,020 + -1.0 1,022,020 + +1.0 1,022,020 + -0.1 1,022,020 + +0.9 1,022,020 + -1.7 1,022,020 + +0.5 1,022,020 + -2.1 1,022,020 + +1.5 1,022,020 + -1.5 1,022,020 + -0.0 1,022,021 - +0.2 1,022,021 - -1.2 1,022,021 - -0.6 1,022,021 - +0.0 1,022,021 - -1.8 1,022,021 - -0.0 1,022,021 - -0.0 1,022,021 - +0.8 1,022,021 - -1.6 1,022,021 - +1.7 1,022,021 - +0.3 1,022,021 - +0.3 1,022,021 - -1.0 1,022,021 - -0.1 1,022,021 - +0.3 1,022,021 - +1.4 1,022,023 + +0.2 1,022,024 - -0.2 1,022,024 - -0.1 1,022,024 - -0.5 1,022,043 + -2.8 1,022,043 + -1.0 1,022,043 + +2.0 1,022,043 + +0.1 1,022,043 + +0.6 1,022,044 - +0.0 1,022,044 - +0.4 1,022,044 - -0.6 1,022,044 - -2.3 1,022,044 - -0.2 1,022,061 + +0.1 1,022,061 + +0.5 1,022,061 + -2.1 1,022,131 - +0.5 1,022,131 - -1.4 1,022,156 - +0.3 1,022,156 - -0.6 1,022,171 + +0.8 1,022,171 + -1.1 1,022,287 + +0.5 1,022,287 + -0.6 1,022,287 + -0.5 1,022,288 - -1.3 1,022,288 - +0.7 1,022,291 + -0.1 1,022,291 + +0.6 1,022,291 + +0.3 1,022,291 + +0.4 1,022,291 + +0.7 1,022,291 + -0.2 1,022,292 - -1.1 1,022,292 - -2.2 1,022,292 - -0.4 1,022,294 + -0.3 1,022,294 + +0.7 1,022,294 + -0.3 1,022,318 + -0.1 1,022,318 + +0.6 1,022,319 - -1.3 1,022,319 - -1.3 1,022,348 + -1.3 1,022,348 + -0.0 1,022,348 + -0.8 1,022,349 - +2.3 1,022,426 - -2.1 1,022,426 - -0.8 1,022,604 + PfGW456L13_913 0.23 -0.1 1,022,604 + PfGW456L13_913 0.23 -1.1 1,022,604 + PfGW456L13_913 0.23 -1.3 1,022,605 - PfGW456L13_913 0.23 +0.1 1,022,605 - PfGW456L13_913 0.23 +1.7 1,022,605 - PfGW456L13_913 0.23 -1.3 1,023,010 + PfGW456L13_913 0.54 +1.0 1,023,010 + PfGW456L13_913 0.54 -0.9 1,023,014 + PfGW456L13_913 0.54 -1.4 1,023,014 + PfGW456L13_913 0.54 -2.0 1,023,014 + PfGW456L13_913 0.54 -2.1 1,023,014 + PfGW456L13_913 0.54 -1.5 1,023,014 + PfGW456L13_913 0.54 -1.7 1,023,014 + PfGW456L13_913 0.54 -0.5 1,023,015 + PfGW456L13_913 0.54 -1.1 1,023,015 - PfGW456L13_913 0.54 -1.1 1,023,015 - PfGW456L13_913 0.54 -1.6 1,023,015 - PfGW456L13_913 0.54 +0.7
Or see this region's nucleotide sequence