Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4648

Experiment: Putrescine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Putrescine (C)
5,185,239	+		PfGW456L13_4647	0.25	+0.7
5,185,250	+		PfGW456L13_4647	0.27	+0.2
5,185,250	+		PfGW456L13_4647	0.27	+0.2
5,185,250	+		PfGW456L13_4647	0.27	-0.9
5,185,250	+		PfGW456L13_4647	0.27	+0.6
5,185,251	-		PfGW456L13_4647	0.27	-0.1
5,185,251	-		PfGW456L13_4647	0.27	+0.3
5,185,251	-		PfGW456L13_4647	0.27	-0.3
5,185,389	+		PfGW456L13_4647	0.41	-0.6
5,185,389	+		PfGW456L13_4647	0.41	+1.6
5,185,389	+		PfGW456L13_4647	0.41	-0.6
5,185,390	-		PfGW456L13_4647	0.41	-0.1
5,185,495	-		PfGW456L13_4647	0.52	-0.8
5,185,495	-		PfGW456L13_4647	0.52	-0.4
5,185,675	+		PfGW456L13_4647	0.71	+0.3
5,185,675	+		PfGW456L13_4647	0.71	-0.3
5,185,675	+		PfGW456L13_4647	0.71	-1.1
5,185,675	+		PfGW456L13_4647	0.71	+0.1
5,185,676	-		PfGW456L13_4647	0.71	-0.6
5,185,676	-		PfGW456L13_4647	0.71	+0.5
5,185,676	-		PfGW456L13_4647	0.71	-1.6
5,185,693	+		PfGW456L13_4647	0.73	+0.1
5,185,725	+		PfGW456L13_4647	0.76	-0.9
5,185,725	+		PfGW456L13_4647	0.76	-1.2
5,185,725	+		PfGW456L13_4647	0.76	-1.4
5,185,725	+		PfGW456L13_4647	0.76	-0.9
5,185,725	+		PfGW456L13_4647	0.76	-1.0
5,185,725	+		PfGW456L13_4647	0.76	+0.3
5,185,726	-		PfGW456L13_4647	0.77	+1.3
5,185,726	-		PfGW456L13_4647	0.77	+2.0
5,185,746	+				+2.7
5,185,746	+		PfGW456L13_4647	0.79	-0.5
5,185,746	+		PfGW456L13_4647	0.79	+0.1
5,185,746	+		PfGW456L13_4647	0.79	-2.0
5,185,747	-		PfGW456L13_4647	0.79	-0.1
5,185,947	+				+1.0
5,185,947	+				+0.1
5,185,948	-				-0.1
5,185,973	+				+0.7
5,185,973	+				-0.9
5,185,973	+				+0.7
5,185,973	+				+1.9
5,185,973	+				+0.1
5,185,973	+				-0.4
5,185,974	-				-0.8
5,185,974	-				-0.4
5,185,974	-				-0.6
5,186,049	+				+0.4
5,186,169	+		PfGW456L13_4648	0.14	-1.2
5,186,169	+		PfGW456L13_4648	0.14	+0.6
5,186,209	+		PfGW456L13_4648	0.18	+0.2
5,186,209	+		PfGW456L13_4648	0.18	+0.6
5,186,209	+		PfGW456L13_4648	0.18	+0.1
5,186,209	+		PfGW456L13_4648	0.18	+0.5
5,186,209	+		PfGW456L13_4648	0.18	-1.3
5,186,209	+		PfGW456L13_4648	0.18	+0.3
5,186,209	+		PfGW456L13_4648	0.18	-0.5
5,186,209	+		PfGW456L13_4648	0.18	-0.8
5,186,209	+		PfGW456L13_4648	0.18	-0.0
5,186,209	+		PfGW456L13_4648	0.18	-0.1
5,186,209	+		PfGW456L13_4648	0.18	-1.1
5,186,209	+		PfGW456L13_4648	0.18	-1.9
5,186,210	-		PfGW456L13_4648	0.18	-0.4
5,186,210	-		PfGW456L13_4648	0.18	-2.2
5,186,262	+		PfGW456L13_4648	0.24	-1.9
5,186,262	+		PfGW456L13_4648	0.24	+0.6
5,186,263	-		PfGW456L13_4648	0.24	-0.9
5,186,263	-		PfGW456L13_4648	0.24	-1.2
5,186,359	-		PfGW456L13_4648	0.35	-0.1
5,186,359	-		PfGW456L13_4648	0.35	-0.7
5,186,362	+				+0.4
5,186,363	-		PfGW456L13_4648	0.35	-0.1
5,186,516	-		PfGW456L13_4648	0.53	-0.5
5,186,788	-		PfGW456L13_4648	0.83	-0.4
5,186,788	-		PfGW456L13_4648	0.83	-1.4
5,186,827	-		PfGW456L13_4648	0.88	-1.0
5,186,866	+				-0.2
5,186,867	-				+1.0
5,186,867	-				+1.1
5,186,867	-				+0.8
5,186,867	-				+1.7
5,186,867	-				+0.6
5,186,868	+				-0.3
5,186,868	+				+0.7
5,186,868	+				-0.1
5,186,869	-				-0.7
5,186,869	-				-1.0
5,186,869	-				+0.8
5,186,869	-				+0.9
5,186,967	+		PfGW456L13_4649	0.17	+2.0
5,186,967	+		PfGW456L13_4649	0.17	-1.0
5,186,968	-		PfGW456L13_4649	0.18	+0.1
5,186,968	-		PfGW456L13_4649	0.18	+1.7
5,186,968	-		PfGW456L13_4649	0.18	-1.0
5,187,011	+		PfGW456L13_4649	0.34	+0.8
5,187,011	+		PfGW456L13_4649	0.34	-1.0
5,187,025	+		PfGW456L13_4649	0.39	-0.9
5,187,066	+		PfGW456L13_4649	0.54	-0.6
5,187,066	+		PfGW456L13_4649	0.54	-2.0
5,187,066	+		PfGW456L13_4649	0.54	+1.5
5,187,066	+		PfGW456L13_4649	0.54	-2.9
5,187,066	+		PfGW456L13_4649	0.54	+0.1
5,187,066	+		PfGW456L13_4649	0.54	+0.2
5,187,066	+		PfGW456L13_4649	0.54	+0.5
5,187,066	+		PfGW456L13_4649	0.54	+0.3
5,187,066	+		PfGW456L13_4649	0.54	-0.3
5,187,066	+		PfGW456L13_4649	0.54	-0.4
5,187,067	-		PfGW456L13_4649	0.55	-1.2
5,187,067	-		PfGW456L13_4649	0.55	+0.5
5,187,067	-		PfGW456L13_4649	0.55	-0.3
5,187,067	-		PfGW456L13_4649	0.55	-0.1
5,187,067	-		PfGW456L13_4649	0.55	+0.7
5,187,067	-		PfGW456L13_4649	0.55	+0.7
5,187,067	-		PfGW456L13_4649	0.55	+0.8
5,187,067	-		PfGW456L13_4649	0.55	+0.6
5,187,067	-		PfGW456L13_4649	0.55	-1.4
5,187,067	-		PfGW456L13_4649	0.55	-2.3
5,187,067	-		PfGW456L13_4649	0.55	-0.7
5,187,109	+				+1.1
5,187,109	+		PfGW456L13_4649	0.70	+1.4
5,187,164	+				+0.5
5,187,164	+				-0.6
5,187,164	+				+0.3
5,187,164	+				+0.6
5,187,165	-				+0.9
5,187,165	-				-0.4
5,187,165	-				+1.6
5,187,165	-				-0.3
5,187,165	-				+2.4
5,187,165	-				+1.0
5,187,165	-				+0.3
5,187,181	+				+1.0
5,187,181	+				-1.4
5,187,181	+				+0.2
5,187,182	-				+0.2
5,187,182	-				-1.6
5,187,182	-				-0.3
5,187,182	-				+0.8
5,187,182	-				-0.6
5,187,183	+				-0.5
5,187,185	+				+0.8
5,187,185	+				-0.1
5,187,186	-				-1.5
5,187,186	-				-0.9
5,187,186	-				+0.6
5,187,194	+				-0.1
5,187,195	-				-1.2
5,187,219	+				+0.4
5,187,331	-				-0.3
5,187,390	+				+0.9
5,187,390	+				+0.2
5,187,392	+				-0.4
5,187,393	-				-0.4
5,187,614	+				-0.7
5,187,615	-				-2.0
5,187,653	-				-0.4
5,187,699	-				-0.6
5,187,699	-				+1.4
5,187,701	-				-0.9
5,187,701	-				+1.4
5,187,701	-				+0.4
5,187,701	-				+1.3
5,187,701	-				-0.7
5,187,920	+				+0.0
5,187,920	+				+0.6
5,187,920	+				-1.1
5,187,920	+				-0.5
5,187,920	+				+1.1
5,187,920	+				+0.3
5,187,920	+				-0.7
5,187,921	-				-0.6
5,187,921	-				-1.3
5,187,921	-				-0.1
5,187,927	+				-0.5
5,187,928	-				+1.2