Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_3622

Experiment: Putrescine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Putrescine (C)
4,075,970	+		PfGW456L13_3620	0.70	+0.4
4,075,971	-				+0.1
4,075,971	-		PfGW456L13_3620	0.70	+1.3
4,075,971	-		PfGW456L13_3620	0.70	-0.4
4,075,971	-		PfGW456L13_3620	0.70	+0.6
4,075,971	-		PfGW456L13_3620	0.70	-1.2
4,075,971	-		PfGW456L13_3620	0.70	-1.5
4,075,971	-		PfGW456L13_3620	0.70	+0.4
4,075,973	+		PfGW456L13_3620	0.70	-0.6
4,075,973	+		PfGW456L13_3620	0.70	+2.1
4,075,974	-		PfGW456L13_3620	0.70	+0.2
4,075,974	-		PfGW456L13_3620	0.70	-0.4
4,075,974	-		PfGW456L13_3620	0.70	-0.2
4,075,974	-		PfGW456L13_3620	0.70	+1.1
4,076,029	-		PfGW456L13_3620	0.76	-0.2
4,076,074	+		PfGW456L13_3620	0.81	+1.9
4,076,490	+		PfGW456L13_3621	0.22	+0.8
4,076,490	+		PfGW456L13_3621	0.22	-0.3
4,076,491	-				+2.4
4,076,491	-		PfGW456L13_3621	0.23	-0.4
4,076,548	+		PfGW456L13_3621	0.32	-1.4
4,076,548	+		PfGW456L13_3621	0.32	+0.4
4,076,548	+		PfGW456L13_3621	0.32	-1.0
4,076,548	+		PfGW456L13_3621	0.32	-0.0
4,076,746	+		PfGW456L13_3621	0.67	-1.5
4,076,746	+		PfGW456L13_3621	0.67	-2.5
4,076,746	+		PfGW456L13_3621	0.67	+1.4
4,076,785	+		PfGW456L13_3621	0.74	-1.2
4,076,830	+		PfGW456L13_3621	0.81	+1.4
4,076,830	+		PfGW456L13_3621	0.81	-0.8
4,076,830	+		PfGW456L13_3621	0.81	+0.5
4,076,830	+		PfGW456L13_3621	0.81	+0.6
4,076,911	+				-0.9
4,076,911	+				+0.2
4,076,911	+				-0.5
4,076,911	+				+1.6
4,076,911	+				-0.2
4,076,911	+				+0.2
4,076,912	-				+2.0
4,076,912	-				+1.1
4,076,912	-				-0.2
4,076,912	-				-2.6
4,076,920	-				+1.1
4,076,935	-				+0.5
4,076,935	-				+1.3
4,077,115	-		PfGW456L13_3622	0.12	-0.4
4,077,115	-		PfGW456L13_3622	0.12	+0.4
4,077,115	-		PfGW456L13_3622	0.12	-0.4
4,077,156	+		PfGW456L13_3622	0.15	-2.2
4,077,156	+		PfGW456L13_3622	0.15	+0.1
4,077,157	-		PfGW456L13_3622	0.15	+0.3
4,077,177	+		PfGW456L13_3622	0.17	-1.3
4,077,177	+		PfGW456L13_3622	0.17	-2.1
4,077,178	-		PfGW456L13_3622	0.17	+0.2
4,077,212	+		PfGW456L13_3622	0.19	-0.2
4,077,213	-		PfGW456L13_3622	0.19	-0.7
4,077,213	-		PfGW456L13_3622	0.19	+0.1
4,077,213	-		PfGW456L13_3622	0.19	+1.2
4,077,213	-		PfGW456L13_3622	0.19	-2.3
4,077,213	-		PfGW456L13_3622	0.19	-0.2
4,077,265	+		PfGW456L13_3622	0.23	-0.3
4,077,266	-		PfGW456L13_3622	0.23	-0.8
4,077,374	+		PfGW456L13_3622	0.31	+1.4
4,077,374	+		PfGW456L13_3622	0.31	-0.8
4,077,375	-		PfGW456L13_3622	0.31	+0.8
4,077,528	+		PfGW456L13_3622	0.41	+0.9
4,077,528	+		PfGW456L13_3622	0.41	-2.3
4,077,528	+		PfGW456L13_3622	0.41	-0.8
4,077,528	+		PfGW456L13_3622	0.41	+0.8
4,077,528	+		PfGW456L13_3622	0.41	+1.5
4,077,529	-		PfGW456L13_3622	0.41	+1.5
4,077,576	+		PfGW456L13_3622	0.45	-1.7
4,077,576	+				+3.0
4,077,576	+		PfGW456L13_3622	0.45	+0.2
4,077,576	+		PfGW456L13_3622	0.45	-0.0
4,077,577	-		PfGW456L13_3622	0.45	-0.7
4,077,577	-		PfGW456L13_3622	0.45	-1.9
4,077,577	-		PfGW456L13_3622	0.45	+0.3
4,077,577	-		PfGW456L13_3622	0.45	-0.2
4,077,647	+		PfGW456L13_3622	0.50	+1.7
4,077,648	-		PfGW456L13_3622	0.50	-1.1
4,077,648	-		PfGW456L13_3622	0.50	+0.8
4,077,774	+		PfGW456L13_3622	0.59	-0.4
4,077,799	+		PfGW456L13_3622	0.60	+0.3
4,077,800	-		PfGW456L13_3622	0.60	+0.7
4,077,867	+		PfGW456L13_3622	0.65	-0.9
4,077,867	+				+0.8
4,077,936	+		PfGW456L13_3622	0.70	+0.4
4,077,955	+		PfGW456L13_3622	0.71	-0.5
4,077,955	+		PfGW456L13_3622	0.71	-1.7
4,077,955	+		PfGW456L13_3622	0.71	+0.6
4,077,955	+		PfGW456L13_3622	0.71	+0.3
4,077,956	-		PfGW456L13_3622	0.71	-0.1
4,077,956	-		PfGW456L13_3622	0.71	-1.2
4,077,959	+		PfGW456L13_3622	0.72	-1.1
4,077,959	+		PfGW456L13_3622	0.72	-1.5
4,077,959	+		PfGW456L13_3622	0.72	-0.8
4,077,959	+		PfGW456L13_3622	0.72	-2.4
4,077,960	-		PfGW456L13_3622	0.72	-0.0
4,078,002	+		PfGW456L13_3622	0.75	-0.2
4,078,002	+		PfGW456L13_3622	0.75	-0.4
4,078,002	+		PfGW456L13_3622	0.75	-0.8
4,078,002	+		PfGW456L13_3622	0.75	-1.3
4,078,002	+		PfGW456L13_3622	0.75	-0.8
4,078,003	-		PfGW456L13_3622	0.75	-0.7
4,078,003	-		PfGW456L13_3622	0.75	+1.3
4,078,003	-		PfGW456L13_3622	0.75	-0.1
4,078,003	-		PfGW456L13_3622	0.75	-0.5
4,078,019	-		PfGW456L13_3622	0.76	+0.9
4,078,032	+		PfGW456L13_3622	0.77	-0.8
4,078,032	+		PfGW456L13_3622	0.77	-0.6
4,078,033	-		PfGW456L13_3622	0.77	-0.6
4,078,033	-		PfGW456L13_3622	0.77	+1.9
4,078,033	-		PfGW456L13_3622	0.77	+0.1
4,078,033	-		PfGW456L13_3622	0.77	+0.5
4,078,033	-		PfGW456L13_3622	0.77	-0.8
4,078,033	-		PfGW456L13_3622	0.77	-2.1
4,078,052	-		PfGW456L13_3622	0.78	+2.8
4,078,108	-		PfGW456L13_3622	0.82	-0.1
4,078,108	-		PfGW456L13_3622	0.82	-1.3
4,078,155	-		PfGW456L13_3622	0.85	-1.2
4,078,155	-		PfGW456L13_3622	0.85	-0.1
4,078,156	+		PfGW456L13_3622	0.85	+0.3
4,078,222	+				+0.3
4,078,222	+				+0.6
4,078,223	-				+0.3
4,078,269	+				+0.8
4,078,269	+				-0.9
4,078,269	+				+0.5
4,078,269	+				-1.5
4,078,270	-				+0.0
4,078,270	-				-0.8
4,078,270	-				+0.8
4,078,270	-				-0.8
4,078,270	-				-0.3
4,078,270	-				+0.1
4,078,270	-				+0.8
4,078,303	+				-0.7
4,078,304	-				+0.8
4,078,335	+				+0.1
4,078,335	+				-0.8
4,078,377	+				+1.4
4,078,377	+				-0.1
4,078,378	-				+0.2
4,078,429	+				-0.3
4,078,429	+				-1.9
4,078,429	+				+0.1
4,078,429	+				-2.6
4,078,429	+				+1.4
4,078,430	-				-1.2
4,078,430	-				+0.2
4,078,430	-				+0.9
4,078,431	+				-1.7
4,078,431	+				-1.8
4,078,431	+				-2.3
4,078,431	+				-0.1
4,078,432	-				+0.7
4,078,453	-				+1.4
4,078,501	-				+1.0
4,078,505	+				-0.6
4,078,505	+				-0.8
4,078,506	-				+0.1
4,078,654	-				-0.5
4,078,696	-		PfGW456L13_3623	0.11	+1.6
4,078,797	-		PfGW456L13_3623	0.40	+0.8
4,078,896	-		PfGW456L13_3623	0.68	-0.4
4,078,896	-		PfGW456L13_3623	0.68	+0.3
4,078,903	+		PfGW456L13_3623	0.70	+0.2
4,078,904	-		PfGW456L13_3623	0.70	+1.3
4,078,916	-		PfGW456L13_3623	0.73	+0.4
4,078,916	-		PfGW456L13_3623	0.73	-0.9
4,078,940	+		PfGW456L13_3623	0.80	-1.4
4,079,158	-				+0.6
4,079,159	+				-0.8
4,079,159	+				-0.6
4,079,159	+				-2.2
4,079,160	-				+1.1
4,079,160	-				+1.1
4,079,160	-				-0.2
4,079,160	-				+1.9
4,079,160	-				+1.0
4,079,252	+				+0.8
4,079,253	-				+0.6
4,079,265	+				-2.5
4,079,266	-				-0.7
4,079,268	+				+1.1
4,079,268	+				-0.3
4,079,269	-				-0.9
4,079,269	-				-1.1
4,079,269	-				+0.8
4,079,269	-				+0.8
4,079,274	+				+0.2
4,079,274	+				+0.6
4,079,274	+				+0.6
4,079,274	+				+0.1
4,079,275	-				-1.6
4,079,275	-				-1.7
4,079,275	-				+1.0
4,079,275	-				+0.1
4,079,275	-				-0.0
4,079,351	-				-1.8
4,079,351	-				+0.4
4,079,351	-				-0.4
4,079,351	-				+1.0