Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2035

Experiment: Putrescine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Putrescine (C)
2,236,492	+		PfGW456L13_2033	0.40	+0.2
2,236,493	-		PfGW456L13_2033	0.41	-1.3
2,236,687	+		PfGW456L13_2033	0.55	+0.0
2,236,687	+		PfGW456L13_2033	0.55	+0.4
2,236,688	-		PfGW456L13_2033	0.55	+0.2
2,236,688	-		PfGW456L13_2033	0.55	-1.1
2,236,688	-		PfGW456L13_2033	0.55	-1.2
2,236,770	+		PfGW456L13_2033	0.61	-0.8
2,236,992	-		PfGW456L13_2033	0.77	+0.3
2,237,134	+		PfGW456L13_2033	0.88	+1.7
2,237,154	+		PfGW456L13_2033	0.89	+0.8
2,237,154	+		PfGW456L13_2033	0.89	-0.2
2,237,154	+		PfGW456L13_2033	0.89	+1.1
2,237,154	+		PfGW456L13_2033	0.89	+1.3
2,237,154	+		PfGW456L13_2033	0.89	+1.8
2,237,154	+		PfGW456L13_2033	0.89	+0.9
2,237,154	+		PfGW456L13_2033	0.89	+1.4
2,237,154	+		PfGW456L13_2033	0.89	+1.9
2,237,155	-		PfGW456L13_2033	0.89	+0.3
2,237,155	-		PfGW456L13_2033	0.89	+2.3
2,237,155	-		PfGW456L13_2033	0.89	-1.7
2,237,155	-		PfGW456L13_2033	0.89	-1.5
2,237,155	-		PfGW456L13_2033	0.89	-1.0
2,237,155	-		PfGW456L13_2033	0.89	-2.0
2,237,155	-		PfGW456L13_2033	0.89	-0.2
2,237,155	-		PfGW456L13_2033	0.89	-2.4
2,237,243	+				+0.2
2,237,243	+				+1.3
2,237,244	-				-1.3
2,237,295	+				-0.9
2,237,295	+				-0.7
2,237,296	-				-1.3
2,237,296	-				-0.3
2,237,404	-		PfGW456L13_2034	0.75	+0.3
2,237,412	+		PfGW456L13_2034	0.80	-2.6
2,237,412	+		PfGW456L13_2034	0.80	-0.5
2,237,413	-		PfGW456L13_2034	0.81	+0.7
2,237,424	+				-1.5
2,237,425	-				+0.3
2,237,464	+				-2.3
2,237,547	-				-1.6
2,237,603	-				-0.7
2,237,603	-				-0.9
2,237,603	-				-2.7
2,237,690	+		PfGW456L13_2035	0.12	-1.7
2,237,690	+		PfGW456L13_2035	0.12	-1.7
2,237,996	+		PfGW456L13_2035	0.26	+1.1
2,237,996	+		PfGW456L13_2035	0.26	-1.8
2,237,997	-		PfGW456L13_2035	0.26	-1.2
2,237,997	-		PfGW456L13_2035	0.26	-1.2
2,237,997	-		PfGW456L13_2035	0.26	+1.1
2,237,997	-		PfGW456L13_2035	0.26	-2.8
2,237,997	-		PfGW456L13_2035	0.26	-1.7
2,237,997	-		PfGW456L13_2035	0.26	-0.3
2,237,997	-		PfGW456L13_2035	0.26	-1.3
2,238,032	-		PfGW456L13_2035	0.27	-1.4
2,238,065	+		PfGW456L13_2035	0.29	-0.8
2,238,083	+		PfGW456L13_2035	0.30	-1.8
2,238,084	-		PfGW456L13_2035	0.30	-1.3
2,238,084	-		PfGW456L13_2035	0.30	-2.1
2,238,084	-		PfGW456L13_2035	0.30	-0.3
2,238,084	-		PfGW456L13_2035	0.30	-1.0
2,238,221	+		PfGW456L13_2035	0.36	-0.2
2,238,221	+		PfGW456L13_2035	0.36	-1.6
2,238,222	-		PfGW456L13_2035	0.36	-2.8
2,238,222	-		PfGW456L13_2035	0.36	-0.9
2,238,222	-		PfGW456L13_2035	0.36	+0.7
2,238,272	+		PfGW456L13_2035	0.38	-1.2
2,238,273	-		PfGW456L13_2035	0.38	-2.5
2,238,273	-		PfGW456L13_2035	0.38	-1.5
2,238,273	-		PfGW456L13_2035	0.38	-1.3
2,238,320	+		PfGW456L13_2035	0.40	-0.3
2,238,380	+		PfGW456L13_2035	0.43	-0.2
2,238,380	+		PfGW456L13_2035	0.43	-0.8
2,238,381	-		PfGW456L13_2035	0.43	-1.2
2,238,381	-		PfGW456L13_2035	0.43	-1.0
2,238,450	+		PfGW456L13_2035	0.46	-2.0
2,238,450	+		PfGW456L13_2035	0.46	-1.5
2,238,450	+		PfGW456L13_2035	0.46	-0.1
2,238,450	+		PfGW456L13_2035	0.46	-0.4
2,238,451	-		PfGW456L13_2035	0.46	+0.1
2,238,451	-		PfGW456L13_2035	0.46	-0.2
2,238,521	+		PfGW456L13_2035	0.49	-0.9
2,238,521	+		PfGW456L13_2035	0.49	-0.3
2,238,521	+		PfGW456L13_2035	0.49	-1.9
2,238,521	+		PfGW456L13_2035	0.49	+1.2
2,238,521	+		PfGW456L13_2035	0.49	-2.1
2,238,521	+		PfGW456L13_2035	0.49	-2.3
2,238,521	+		PfGW456L13_2035	0.49	-0.9
2,238,522	-		PfGW456L13_2035	0.49	-1.0
2,238,522	-		PfGW456L13_2035	0.49	-0.3
2,238,522	-		PfGW456L13_2035	0.49	-2.1
2,238,668	+		PfGW456L13_2035	0.56	-2.2
2,238,668	+		PfGW456L13_2035	0.56	-2.1
2,238,669	-		PfGW456L13_2035	0.56	-0.8
2,238,669	-		PfGW456L13_2035	0.56	-0.5
2,238,806	+		PfGW456L13_2035	0.62	-2.0
2,238,806	+		PfGW456L13_2035	0.62	-2.0
2,238,806	+		PfGW456L13_2035	0.62	-1.7
2,238,807	-		PfGW456L13_2035	0.62	-2.3
2,238,807	-		PfGW456L13_2035	0.62	-1.5
2,238,807	-		PfGW456L13_2035	0.62	-1.7
2,238,807	-		PfGW456L13_2035	0.62	+1.7
2,238,807	-		PfGW456L13_2035	0.62	-0.5
2,238,807	-		PfGW456L13_2035	0.62	+0.1
2,238,807	-		PfGW456L13_2035	0.62	+0.3
2,238,893	+		PfGW456L13_2035	0.66	-0.8
2,238,894	-		PfGW456L13_2035	0.66	-2.0
2,238,894	-		PfGW456L13_2035	0.66	-1.7
2,238,901	+		PfGW456L13_2035	0.66	-1.3
2,238,902	-		PfGW456L13_2035	0.66	-1.7
2,238,902	-		PfGW456L13_2035	0.66	-2.2
2,239,071	+		PfGW456L13_2035	0.74	-1.3
2,239,072	-		PfGW456L13_2035	0.74	+0.2
2,239,072	-		PfGW456L13_2035	0.74	-0.9
2,239,116	+		PfGW456L13_2035	0.76	+0.8
2,239,117	-		PfGW456L13_2035	0.76	-2.1
2,239,173	+		PfGW456L13_2035	0.78	+0.7
2,239,174	-		PfGW456L13_2035	0.78	-1.3
2,239,174	-		PfGW456L13_2035	0.78	-0.7
2,239,174	-		PfGW456L13_2035	0.78	-1.2
2,239,299	-		PfGW456L13_2035	0.84	-1.7
2,239,299	-		PfGW456L13_2035	0.84	-0.7
2,239,414	-		PfGW456L13_2035	0.89	-0.3
2,239,414	-		PfGW456L13_2035	0.89	+0.6
2,239,448	+				+0.4
2,239,631	-				+0.5
2,239,631	-				-2.1
2,239,654	+				-1.8
2,239,654	+				-0.8
2,239,654	+				+0.2
2,239,654	+				-1.3
2,239,654	+				+1.7
2,239,654	+				-0.8
2,239,654	+				-0.2
2,239,655	-				-1.7
2,239,655	-				+0.1
2,239,655	-				-0.1
2,239,804	+				-0.2
2,239,804	+				+0.8
2,239,804	+				-0.6
2,239,805	-				+1.8
2,239,805	-				+0.7
2,239,805	-				+0.1
2,239,805	-				+1.2
2,239,856	-				-0.9
2,239,885	+		PfGW456L13_2036	0.10	-0.2
2,239,886	-		PfGW456L13_2036	0.10	+2.1
2,239,886	-		PfGW456L13_2036	0.10	+0.2
2,239,886	-		PfGW456L13_2036	0.10	+0.8
2,239,921	+		PfGW456L13_2036	0.14	+0.8
2,239,922	-		PfGW456L13_2036	0.15	-0.0
2,240,002	+		PfGW456L13_2036	0.24	-2.6
2,240,002	+		PfGW456L13_2036	0.24	-1.3
2,240,002	+		PfGW456L13_2036	0.24	+0.2
2,240,002	+		PfGW456L13_2036	0.24	+0.1
2,240,002	+		PfGW456L13_2036	0.24	+1.3
2,240,002	+		PfGW456L13_2036	0.24	+0.3
2,240,003	-		PfGW456L13_2036	0.24	-0.3
2,240,003	-		PfGW456L13_2036	0.24	-0.2
2,240,003	-		PfGW456L13_2036	0.24	-0.9
2,240,003	-		PfGW456L13_2036	0.24	-0.8
2,240,003	-		PfGW456L13_2036	0.24	-0.4
2,240,003	-		PfGW456L13_2036	0.24	-1.9
2,240,003	-		PfGW456L13_2036	0.24	-1.0
2,240,003	-		PfGW456L13_2036	0.24	-1.0
2,240,003	-		PfGW456L13_2036	0.24	-1.6
2,240,003	-		PfGW456L13_2036	0.24	+0.9
2,240,005	+		PfGW456L13_2036	0.24	-0.7
2,240,005	+		PfGW456L13_2036	0.24	-0.2
2,240,005	+		PfGW456L13_2036	0.24	+0.8
2,240,006	-		PfGW456L13_2036	0.25	-0.0
2,240,116	+		PfGW456L13_2036	0.38	+0.4
2,240,116	+		PfGW456L13_2036	0.38	+1.0
2,240,116	+		PfGW456L13_2036	0.38	-0.7
2,240,116	+				+1.1
2,240,116	+		PfGW456L13_2036	0.38	+0.4
2,240,116	+		PfGW456L13_2036	0.38	-1.5
2,240,117	-		PfGW456L13_2036	0.38	+1.3
2,240,117	-		PfGW456L13_2036	0.38	+0.7
2,240,517	+		PfGW456L13_2036	0.86	+0.2
2,240,517	+		PfGW456L13_2036	0.86	-1.3
2,240,518	-		PfGW456L13_2036	0.86	-1.7
2,240,644	+				-0.5
2,240,644	+				+0.1
2,240,644	+				-0.9
2,240,645	-				-0.9
2,240,645	-				+0.6
2,240,645	-				-2.2
2,240,652	+				-0.3
2,240,652	+				+0.7
2,240,652	+				+0.7
2,240,653	-				+0.8
2,240,653	-				-1.3
2,240,653	-				-0.1
2,240,653	-				+0.2
2,240,655	+				+0.5
2,240,655	+				+1.3
2,240,655	+				-0.2
2,240,655	+				-0.2
2,240,655	+				+0.5
2,240,655	+				+1.0
2,240,655	+				-2.4
2,240,656	-				+0.2