Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1674

Experiment: Putrescine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Putrescine (C)
1,840,329	+		PfGW456L13_1672	0.81	-0.1
1,840,655	-		PfGW456L13_1673	0.29	-2.6
1,840,669	+		PfGW456L13_1673	0.32	+0.3
1,840,669	+		PfGW456L13_1673	0.32	+0.4
1,840,669	+		PfGW456L13_1673	0.32	+0.4
1,840,669	+		PfGW456L13_1673	0.32	-0.5
1,840,670	-		PfGW456L13_1673	0.32	+0.8
1,840,708	+		PfGW456L13_1673	0.40	+0.8
1,840,709	-		PfGW456L13_1673	0.40	-0.1
1,840,709	-		PfGW456L13_1673	0.40	-0.5
1,840,709	-		PfGW456L13_1673	0.40	-0.3
1,840,807	+		PfGW456L13_1673	0.62	-2.6
1,841,004	+				+0.0
1,841,019	+				+0.1
1,841,019	+				+0.2
1,841,020	-				+2.1
1,841,020	-				+0.3
1,841,023	+				-1.0
1,841,024	-				+0.6
1,841,024	-				-0.2
1,841,102	+				+1.0
1,841,102	+				+0.8
1,841,121	+				+0.4
1,841,121	+				-0.3
1,841,121	+				+0.6
1,841,121	+				+0.9
1,841,121	+				+1.5
1,841,121	+				+1.2
1,841,121	+				-3.2
1,841,122	-				-0.2
1,841,122	-				-0.1
1,841,122	-				+1.0
1,841,183	+				+0.7
1,841,196	+				-1.7
1,841,197	-				-0.9
1,841,265	-				+0.0
1,841,328	+				+0.4
1,841,329	-				+1.6
1,841,329	-				+0.8
1,841,329	-				-0.4
1,841,332	+				-0.7
1,841,332	+				+0.2
1,841,332	+				-1.8
1,841,332	+				-1.6
1,841,332	+				-0.5
1,841,332	+				+1.4
1,841,333	-				-1.3
1,841,350	+				-1.8
1,841,367	+				+0.9
1,841,368	-				+0.9
1,841,368	-				-0.8
1,841,368	-				-0.6
1,841,448	+		PfGW456L13_1674	0.12	-0.2
1,841,448	+		PfGW456L13_1674	0.12	-0.9
1,841,976	+		PfGW456L13_1674	0.48	-1.6
1,842,078	+		PfGW456L13_1674	0.55	+0.5
1,842,078	+		PfGW456L13_1674	0.55	+0.7
1,842,078	+		PfGW456L13_1674	0.55	+2.6
1,842,078	+		PfGW456L13_1674	0.55	-0.3
1,842,078	+		PfGW456L13_1674	0.55	-1.0
1,842,078	+		PfGW456L13_1674	0.55	+0.8
1,842,078	+		PfGW456L13_1674	0.55	+0.8
1,842,078	+		PfGW456L13_1674	0.55	+1.8
1,842,078	+		PfGW456L13_1674	0.55	+0.5
1,842,078	+		PfGW456L13_1674	0.55	+2.2
1,842,078	+		PfGW456L13_1674	0.55	+1.2
1,842,078	+		PfGW456L13_1674	0.55	-0.8
1,842,078	+		PfGW456L13_1674	0.55	-0.6
1,842,078	+		PfGW456L13_1674	0.55	+1.8
1,842,078	+		PfGW456L13_1674	0.55	+1.1
1,842,078	+		PfGW456L13_1674	0.55	-0.4
1,842,079	-		PfGW456L13_1674	0.56	-0.9
1,842,079	-		PfGW456L13_1674	0.56	-0.9
1,842,079	-		PfGW456L13_1674	0.56	-0.5
1,842,079	-		PfGW456L13_1674	0.56	+0.5
1,842,079	-		PfGW456L13_1674	0.56	-1.5
1,842,079	-		PfGW456L13_1674	0.56	+1.8
1,842,079	-		PfGW456L13_1674	0.56	+0.2
1,842,079	-		PfGW456L13_1674	0.56	-1.5
1,842,079	-		PfGW456L13_1674	0.56	+0.1
1,842,079	-		PfGW456L13_1674	0.56	-0.6
1,842,079	-		PfGW456L13_1674	0.56	-0.1
1,842,079	-		PfGW456L13_1674	0.56	+0.2
1,842,079	-		PfGW456L13_1674	0.56	-1.0
1,842,079	-		PfGW456L13_1674	0.56	+0.6
1,842,079	-		PfGW456L13_1674	0.56	-3.1
1,842,079	-		PfGW456L13_1674	0.56	-0.9
1,842,156	+		PfGW456L13_1674	0.61	+1.3
1,842,267	+		PfGW456L13_1674	0.68	-0.3
1,842,268	-		PfGW456L13_1674	0.69	+0.0
1,842,698	-				+0.6
1,842,731	-				-2.3
1,842,753	-				-2.1
1,842,758	+				+0.0
1,842,758	+				+0.9
1,842,758	+				+0.6
1,842,759	-				-1.4
1,842,910	+				-0.0
1,842,910	+				+0.4
1,842,910	+				+0.3
1,842,910	+				+0.4
1,842,910	+				-1.3
1,842,910	+				-0.8
1,842,910	+				+0.4
1,842,911	-				+0.2
1,842,911	-				-0.3
1,842,913	+				+1.4
1,842,976	+				-0.1
1,842,976	+				-1.0
1,842,976	+				+0.8
1,842,977	-				-0.6
1,842,977	-				+0.0
1,842,977	-				+1.8
1,842,977	-				+0.2
1,842,977	-				-0.7
1,842,977	-				-0.9
1,843,045	+		PfGW456L13_1675	0.20	+0.7
1,843,045	+		PfGW456L13_1675	0.20	+1.3
1,843,046	-		PfGW456L13_1675	0.20	-0.8
1,843,046	-		PfGW456L13_1675	0.20	+1.2
1,843,046	-		PfGW456L13_1675	0.20	+0.5
1,843,046	-		PfGW456L13_1675	0.20	-1.5
1,843,127	+		PfGW456L13_1675	0.33	+0.5
1,843,128	-		PfGW456L13_1675	0.33	+0.0
1,843,258	+		PfGW456L13_1675	0.53	+1.2
1,843,258	+		PfGW456L13_1675	0.53	+0.2
1,843,258	+		PfGW456L13_1675	0.53	+0.4
1,843,258	+		PfGW456L13_1675	0.53	-0.3
1,843,258	+		PfGW456L13_1675	0.53	+0.8
1,843,258	+		PfGW456L13_1675	0.53	-0.1
1,843,258	+		PfGW456L13_1675	0.53	-1.6
1,843,258	+		PfGW456L13_1675	0.53	-0.0
1,843,258	+		PfGW456L13_1675	0.53	-0.8
1,843,258	+		PfGW456L13_1675	0.53	+1.6
1,843,258	+		PfGW456L13_1675	0.53	+0.0
1,843,258	+		PfGW456L13_1675	0.53	-1.3
1,843,258	+		PfGW456L13_1675	0.53	-1.5
1,843,258	+		PfGW456L13_1675	0.53	-0.2
1,843,258	+		PfGW456L13_1675	0.53	-2.4
1,843,258	+		PfGW456L13_1675	0.53	+1.8
1,843,258	+		PfGW456L13_1675	0.53	-0.4
1,843,259	-		PfGW456L13_1675	0.53	-1.3
1,843,259	-		PfGW456L13_1675	0.53	+0.8
1,843,259	-		PfGW456L13_1675	0.53	-2.3
1,843,259	-		PfGW456L13_1675	0.53	-0.3
1,843,261	+		PfGW456L13_1675	0.53	+1.6
1,843,262	-		PfGW456L13_1675	0.53	+1.6
1,843,420	+		PfGW456L13_1675	0.77	+0.3
1,843,420	+		PfGW456L13_1675	0.77	+0.8
1,843,420	+		PfGW456L13_1675	0.77	-2.3
1,843,420	+		PfGW456L13_1675	0.77	+0.3
1,843,420	+		PfGW456L13_1675	0.77	-1.0
1,843,421	-		PfGW456L13_1675	0.77	-1.3
1,843,421	-		PfGW456L13_1675	0.77	-0.1
1,843,424	+		PfGW456L13_1675	0.78	-0.1
1,843,462	+		PfGW456L13_1675	0.84	+2.3
1,843,535	+				-1.2
1,843,556	+				-0.6
1,843,557	-				-0.5
1,843,557	-				+0.7
1,843,557	-				-1.3
1,843,573	+				+0.0
1,843,573	+				+0.7
1,843,573	+				-0.3
1,843,573	+				-1.7
1,843,574	-				-0.1
1,843,574	-				-0.7
1,843,615	+				+0.4
1,843,628	+				+0.2
1,843,628	+				+2.2
1,843,657	+				-1.1
1,843,657	+				-1.2
1,843,658	-				-0.2
1,843,658	-				-1.9
1,843,714	-		PfGW456L13_1676	0.11	-1.0