Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1539

Experiment: Putrescine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Putrescine (C)
1,692,678	+		PfGW456L13_1538	0.45	+1.9
1,692,678	+		PfGW456L13_1538	0.45	-1.5
1,692,678	+		PfGW456L13_1538	0.45	-0.8
1,692,845	+		PfGW456L13_1538	0.55	-0.4
1,692,985	-		PfGW456L13_1538	0.63	-1.4
1,693,110	+		PfGW456L13_1538	0.70	-1.6
1,693,110	+		PfGW456L13_1538	0.70	-1.8
1,693,110	+		PfGW456L13_1538	0.70	-2.0
1,693,111	-		PfGW456L13_1538	0.70	-2.2
1,693,111	-		PfGW456L13_1538	0.70	-0.4
1,693,111	-		PfGW456L13_1538	0.70	-0.6
1,693,204	-		PfGW456L13_1538	0.76	-1.3
1,693,204	-		PfGW456L13_1538	0.76	+1.9
1,693,284	+		PfGW456L13_1538	0.81	-1.5
1,693,284	+		PfGW456L13_1538	0.81	+1.9
1,693,297	+		PfGW456L13_1538	0.81	+0.1
1,693,359	+		PfGW456L13_1538	0.85	-1.5
1,693,359	+		PfGW456L13_1538	0.85	+0.1
1,693,359	+		PfGW456L13_1538	0.85	-0.9
1,693,359	+		PfGW456L13_1538	0.85	-0.7
1,693,360	-		PfGW456L13_1538	0.85	-1.4
1,693,360	-		PfGW456L13_1538	0.85	-2.7
1,693,360	-		PfGW456L13_1538	0.85	-0.1
1,693,360	-		PfGW456L13_1538	0.85	-0.4
1,693,360	-		PfGW456L13_1538	0.85	-1.4
1,693,360	-		PfGW456L13_1538	0.85	-2.0
1,693,383	+		PfGW456L13_1538	0.86	-1.8
1,693,383	+		PfGW456L13_1538	0.86	-1.9
1,693,383	+		PfGW456L13_1538	0.86	-1.2
1,693,383	+		PfGW456L13_1538	0.86	-1.1
1,693,383	+		PfGW456L13_1538	0.86	-1.6
1,693,383	+		PfGW456L13_1538	0.86	-1.4
1,693,384	-		PfGW456L13_1538	0.86	+0.1
1,693,384	-		PfGW456L13_1538	0.86	+0.9
1,693,384	-		PfGW456L13_1538	0.86	-1.9
1,693,384	-		PfGW456L13_1538	0.86	-1.6
1,693,425	+		PfGW456L13_1538	0.89	-0.7
1,693,425	+		PfGW456L13_1538	0.89	-0.1
1,693,425	+		PfGW456L13_1538	0.89	-0.6
1,693,425	+		PfGW456L13_1538	0.89	-1.7
1,693,426	-		PfGW456L13_1538	0.89	+1.3
1,693,426	-		PfGW456L13_1538	0.89	+0.1
1,693,426	-		PfGW456L13_1538	0.89	-1.8
1,693,426	-		PfGW456L13_1538	0.89	+0.3
1,693,520	+				-0.7
1,693,583	+				-1.4
1,693,583	+				-2.9
1,693,583	+				-3.1
1,693,583	+				-2.5
1,693,583	+				-0.5
1,693,583	+				-1.1
1,693,583	+				-1.6
1,693,584	-				-0.1
1,693,584	-				-1.9
1,693,607	+				+0.6
1,693,607	+				-1.1
1,693,607	+				+0.8
1,693,607	+				-1.8
1,693,607	+				-1.8
1,693,607	+				-0.0
1,693,607	+				-1.5
1,693,607	+				-1.9
1,693,608	-				-0.1
1,693,611	+				-2.5
1,693,611	+				-1.3
1,693,611	+				-1.8
1,693,611	+				+0.6
1,693,611	+				-3.1
1,693,612	-				-0.8
1,693,627	+				-1.4
1,693,627	+				-0.1
1,693,627	+				-1.7
1,693,627	+				-0.1
1,693,628	-				-1.6
1,693,628	-				-1.7
1,693,628	-				+0.9
1,693,697	+		PfGW456L13_1539	0.16	-2.8
1,693,697	+		PfGW456L13_1539	0.16	-1.7
1,693,697	+		PfGW456L13_1539	0.16	-1.1
1,693,697	+		PfGW456L13_1539	0.16	-1.8
1,693,697	+		PfGW456L13_1539	0.16	-0.2
1,693,697	+		PfGW456L13_1539	0.16	-1.4
1,693,697	+		PfGW456L13_1539	0.16	-1.9
1,693,697	+		PfGW456L13_1539	0.16	+0.6
1,693,697	+		PfGW456L13_1539	0.16	-1.0
1,693,698	-		PfGW456L13_1539	0.17	-2.4
1,693,698	-		PfGW456L13_1539	0.17	-1.7
1,693,698	-		PfGW456L13_1539	0.17	+0.3
1,693,698	-		PfGW456L13_1539	0.17	-1.8
1,693,698	-		PfGW456L13_1539	0.17	-1.4
1,693,698	-		PfGW456L13_1539	0.17	-2.1
1,693,827	+		PfGW456L13_1539	0.43	-2.4
1,693,828	-		PfGW456L13_1539	0.43	-1.3
1,693,828	-		PfGW456L13_1539	0.43	-0.8
1,693,928	-		PfGW456L13_1539	0.63	-2.7
1,693,934	-		PfGW456L13_1539	0.65	-1.3
1,693,934	-		PfGW456L13_1539	0.65	-0.7
1,693,937	+		PfGW456L13_1539	0.65	-1.9
1,693,937	+		PfGW456L13_1539	0.65	-1.8
1,693,937	+		PfGW456L13_1539	0.65	-3.4
1,693,938	-		PfGW456L13_1539	0.65	-0.7
1,693,938	-		PfGW456L13_1539	0.65	-0.6
1,693,938	-		PfGW456L13_1539	0.65	-0.9
1,693,938	-		PfGW456L13_1539	0.65	-1.4
1,693,973	+		PfGW456L13_1539	0.73	-0.9
1,693,973	+		PfGW456L13_1539	0.73	-1.4
1,693,973	+		PfGW456L13_1539	0.73	-2.6
1,693,974	-		PfGW456L13_1539	0.73	+0.1
1,693,974	-		PfGW456L13_1539	0.73	-1.4
1,693,974	-		PfGW456L13_1539	0.73	-1.8
1,693,974	-		PfGW456L13_1539	0.73	-0.3
1,693,974	-		PfGW456L13_1539	0.73	-2.0
1,693,974	-		PfGW456L13_1539	0.73	-0.8
1,693,974	-		PfGW456L13_1539	0.73	+0.6
1,693,974	-		PfGW456L13_1539	0.73	-2.3
1,693,976	-		PfGW456L13_1539	0.73	-1.9
1,694,094	+				-1.4
1,694,094	+				-0.3
1,694,094	+				-1.4
1,694,094	+				-1.1
1,694,094	+				+0.2
1,694,094	+				-0.1
1,694,094	+				+0.8
1,694,095	-				-2.3
1,694,095	-				-1.2
1,694,095	-				-1.9
1,694,095	-				-0.1
1,694,095	-				-1.1
1,694,095	-				-1.0
1,694,095	-				-1.8
1,694,106	-				-2.4
1,694,106	-				-1.9
1,694,139	+				+0.8
1,694,139	+				+0.5
1,694,139	+				+0.0
1,694,139	+				+0.8
1,694,139	+				+0.3
1,694,140	-				-1.6
1,694,140	-				-2.2
1,694,141	+				-0.6
1,694,141	+				+0.9
1,694,141	+				+0.7
1,694,141	+				+0.6
1,694,142	-				-1.7
1,694,142	-				-1.9
1,694,142	-				-1.8
1,694,142	-				-1.8
1,694,222	+				-1.3
1,694,293	+		PfGW456L13_1540	0.14	-1.2
1,694,417	+		PfGW456L13_1540	0.26	-2.2
1,694,417	+		PfGW456L13_1540	0.26	-2.0
1,694,418	-		PfGW456L13_1540	0.26	-1.4
1,694,418	-		PfGW456L13_1540	0.26	-1.4
1,694,418	-		PfGW456L13_1540	0.26	-2.5
1,694,418	-		PfGW456L13_1540	0.26	-1.7
1,694,489	+		PfGW456L13_1540	0.33	-1.6
1,694,490	-		PfGW456L13_1540	0.33	-2.4
1,694,490	-		PfGW456L13_1540	0.33	-1.5
1,694,490	-		PfGW456L13_1540	0.33	-1.7
1,694,559	+		PfGW456L13_1540	0.40	-2.6
1,694,559	+		PfGW456L13_1540	0.40	-1.7
1,694,559	+		PfGW456L13_1540	0.40	-1.0
1,694,559	+		PfGW456L13_1540	0.40	-1.7
1,694,559	+		PfGW456L13_1540	0.40	+1.3
1,694,559	+		PfGW456L13_1540	0.40	-2.2
1,694,559	+		PfGW456L13_1540	0.40	-0.9
1,694,560	-		PfGW456L13_1540	0.40	-1.1
1,694,560	-		PfGW456L13_1540	0.40	+0.3
1,694,560	-		PfGW456L13_1540	0.40	+0.1
1,694,560	-		PfGW456L13_1540	0.40	-1.0
1,694,560	-		PfGW456L13_1540	0.40	+0.6
1,694,560	-		PfGW456L13_1540	0.40	-1.7
1,694,560	-		PfGW456L13_1540	0.40	-2.0
1,694,560	-		PfGW456L13_1540	0.40	-1.2
1,694,605	+		PfGW456L13_1540	0.44	-2.4
1,694,610	-		PfGW456L13_1540	0.45	-0.9
1,694,651	+		PfGW456L13_1540	0.49	-2.6
1,694,651	+		PfGW456L13_1540	0.49	+1.3
1,694,804	+		PfGW456L13_1540	0.64	-1.9
1,694,823	-		PfGW456L13_1540	0.66	-1.3
1,694,823	-		PfGW456L13_1540	0.66	+0.1
1,694,823	-		PfGW456L13_1540	0.66	-1.9
1,694,867	+		PfGW456L13_1540	0.70	-2.1
1,694,867	+		PfGW456L13_1540	0.70	-2.6
1,694,867	+		PfGW456L13_1540	0.70	-2.5
1,694,867	+		PfGW456L13_1540	0.70	-3.0
1,694,867	+		PfGW456L13_1540	0.70	-0.4
1,694,867	+		PfGW456L13_1540	0.70	-2.1
1,694,867	+		PfGW456L13_1540	0.70	-0.4
1,694,867	+		PfGW456L13_1540	0.70	-0.7
1,694,868	-		PfGW456L13_1540	0.70	+0.9
1,694,868	-		PfGW456L13_1540	0.70	-1.8
1,694,894	+		PfGW456L13_1540	0.73	-0.4
1,694,894	+		PfGW456L13_1540	0.73	-2.6
1,694,894	+		PfGW456L13_1540	0.73	-0.3
1,694,895	-		PfGW456L13_1540	0.73	-0.3
1,694,895	-		PfGW456L13_1540	0.73	-2.2
1,694,895	-		PfGW456L13_1540	0.73	-3.3
1,694,895	-		PfGW456L13_1540	0.73	+0.6
1,694,895	-		PfGW456L13_1540	0.73	-2.3
1,694,895	-		PfGW456L13_1540	0.73	-0.6
1,694,927	+		PfGW456L13_1540	0.76	-2.3
1,694,927	+		PfGW456L13_1540	0.76	-2.7
1,694,992	+		PfGW456L13_1540	0.82	-0.8
1,694,993	-		PfGW456L13_1540	0.83	-1.8
1,695,009	-		PfGW456L13_1540	0.84	-1.4
1,695,070	+				-2.4
1,695,070	+				-1.4