Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS30710

Experiment: D-Glucose (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C); with MOPS
2,692,737	+		PFLU_RS12130	0.20	+0.1
2,692,737	+		PFLU_RS12130	0.20	-0.5
2,692,737	+		PFLU_RS12130	0.20	-1.6
2,692,737	+		PFLU_RS12130	0.20	-0.2
2,692,738	-		PFLU_RS12130	0.20	+1.8
2,692,738	-		PFLU_RS12130	0.20	-1.2
2,692,738	-		PFLU_RS12130	0.20	+0.1
2,692,751	-		PFLU_RS12130	0.23	-2.6
2,692,751	-		PFLU_RS12130	0.23	-0.7
2,692,797	+		PFLU_RS12130	0.33	-3.2
2,692,797	+		PFLU_RS12130	0.33	+0.1
2,692,835	+		PFLU_RS12130	0.42	-0.2
2,692,835	+		PFLU_RS12130	0.42	-0.6
2,692,835	+		PFLU_RS12130	0.42	+0.2
2,692,835	+		PFLU_RS12130	0.42	+0.9
2,692,835	+		PFLU_RS12130	0.42	+0.1
2,692,836	-		PFLU_RS12130	0.42	-1.6
2,692,836	-		PFLU_RS12130	0.42	-0.8
2,692,836	-		PFLU_RS12130	0.42	-0.3
2,692,836	-		PFLU_RS12130	0.42	-0.1
2,692,836	-		PFLU_RS12130	0.42	-0.2
2,692,865	+		PFLU_RS12130	0.49	-1.5
2,692,865	+		PFLU_RS12130	0.49	+1.2
2,692,921	-		PFLU_RS12130	0.61	-1.1
2,692,921	-		PFLU_RS12130	0.61	+0.2
2,692,924	+		PFLU_RS12130	0.62	+0.2
2,692,924	+		PFLU_RS12130	0.62	-0.6
2,692,924	+		PFLU_RS12130	0.62	-1.6
2,692,925	-		PFLU_RS12130	0.62	-1.5
2,692,925	-		PFLU_RS12130	0.62	+1.4
2,692,925	-		PFLU_RS12130	0.62	-2.7
2,692,944	+		PFLU_RS12130	0.66	-1.1
2,692,945	-		PFLU_RS12130	0.66	+0.3
2,692,956	+		PFLU_RS12130	0.69	+0.1
2,692,956	+		PFLU_RS12130	0.69	-0.5
2,692,956	+		PFLU_RS12130	0.69	-2.1
2,693,042	+		PFLU_RS12130	0.88	-0.5
2,693,043	-		PFLU_RS12130	0.88	-0.1
2,693,043	-		PFLU_RS12130	0.88	+0.9
2,693,167	+				+0.0
2,693,168	-				+1.4
2,693,198	+				-0.0
2,693,198	+				-0.9
2,693,198	+				+3.0
2,693,198	+				-2.3
2,693,198	+				-1.6
2,693,198	+				-0.2
2,693,199	-				-1.3
2,693,199	-				-1.9
2,693,199	-				-0.6
2,693,199	-				-2.4
2,693,199	-				-1.4
2,693,199	-				+0.7
2,693,199	-				-0.3
2,693,199	-				+0.9
2,693,199	-				+0.5
2,693,205	-				-1.9
2,693,205	-				+0.4
2,693,294	-		PFLU_RS12135	0.28	-2.1
2,693,442	-		PFLU_RS12135	0.67	-1.1
2,693,454	-		PFLU_RS12135	0.70	-0.5
2,693,464	+		PFLU_RS12135	0.73	+1.8
2,693,471	+		PFLU_RS12135	0.74	-0.3
2,693,472	-		PFLU_RS12135	0.75	+0.1
2,693,472	-		PFLU_RS12135	0.75	+0.1
2,693,475	+		PFLU_RS12135	0.76	+0.2
2,693,475	+		PFLU_RS12135	0.76	-0.2
2,693,475	+		PFLU_RS12135	0.76	+0.6
2,693,475	+		PFLU_RS12135	0.76	+0.3
2,693,476	-		PFLU_RS12135	0.76	+1.1
2,693,476	-		PFLU_RS12135	0.76	+0.7
2,693,476	-		PFLU_RS12135	0.76	+0.1
2,693,476	-		PFLU_RS12135	0.76	+0.8
2,693,476	-		PFLU_RS12135	0.76	-0.9
2,693,566	+				+0.5
2,693,567	-				+0.9
2,693,603	+				-1.6
2,693,603	+				+0.4
2,693,603	+				+0.2
2,693,604	-				+0.1
2,693,604	-				-0.9
2,693,604	-				-0.2
2,693,617	+				-0.6
2,693,630	+				-0.6
2,693,630	+				+0.1
2,693,630	+				+0.8
2,693,630	+				-0.2
2,693,631	-		PFLU_RS30710	0.10	-0.6
2,693,716	+		PFLU_RS30710	0.51	-0.5
2,693,716	+		PFLU_RS30710	0.51	+0.8
2,693,741	+		PFLU_RS30710	0.63	+0.3
2,693,741	+		PFLU_RS30710	0.63	+1.1
2,693,742	-		PFLU_RS30710	0.64	+1.9
2,693,742	-		PFLU_RS30710	0.64	+0.3
2,693,742	-		PFLU_RS30710	0.64	+0.2
2,693,742	-		PFLU_RS30710	0.64	+1.2
2,693,790	+		PFLU_RS30710	0.87	-0.3
2,693,790	+		PFLU_RS30710	0.87	+0.1
2,693,791	-		PFLU_RS30710	0.87	+0.5
2,693,862	+				+0.5
2,693,862	+				-0.3
2,693,862	+				+0.5
2,693,863	-				-0.1
2,693,863	-				-0.8
2,693,863	-				+0.1
2,693,863	-				-0.1
2,693,863	-				+0.4
2,693,863	-				-1.2
2,693,863	-				-0.1
2,693,863	-				+0.6
2,693,863	-				-0.2
2,693,885	+				-0.0
2,693,885	+				-1.7
2,693,885	+				+0.5
2,693,885	+				-0.1
2,693,886	-				-0.2
2,693,886	-				-0.3
2,693,886	-				+1.1
2,693,886	-				+2.7
2,693,886	-				+1.4
2,693,886	-				+1.4
2,693,886	-				+0.7
2,693,887	+				+2.4
2,693,887	+				-1.0
2,693,887	+				+1.2
2,693,887	+				+0.2
2,693,887	+				-1.3
2,693,888	-				+0.8
2,693,888	-				-1.3
2,693,888	-				+0.4
2,693,888	-				-0.3
2,693,888	-				+1.3
2,693,888	-				-0.2
2,693,937	+		PFLU_RS30715	0.17	-0.5
2,693,937	+		PFLU_RS30715	0.17	-0.7
2,693,938	-		PFLU_RS30715	0.17	+0.5
2,693,940	+		PFLU_RS30715	0.18	-0.4
2,693,980	+		PFLU_RS30715	0.29	-0.5
2,693,981	-		PFLU_RS30715	0.29	-0.4
2,693,981	-		PFLU_RS30715	0.29	+0.2
2,693,981	-		PFLU_RS30715	0.29	-0.0
2,694,043	-		PFLU_RS30715	0.47	+0.2
2,694,058	+		PFLU_RS30715	0.51	-1.3
2,694,059	-		PFLU_RS30715	0.52	+2.0
2,694,118	+		PFLU_RS30715	0.68	+0.9
2,694,119	-		PFLU_RS30715	0.69	+1.6
2,694,124	+		PFLU_RS30715	0.70	-1.3
2,694,137	+		PFLU_RS30715	0.74	-0.8
2,694,137	+		PFLU_RS30715	0.74	-0.2
2,694,162	+		PFLU_RS30715	0.81	+0.5
2,694,233	-				-0.0
2,694,270	+				-0.2
2,694,271	-				+0.1
2,694,296	-				+0.3
2,694,296	-				+1.0
2,694,296	-				+0.8
2,694,296	-				+0.1
2,694,296	-				-1.5
2,694,296	-				-0.5
2,694,340	-				-1.3
2,694,340	-				-0.5
2,694,459	+		PFLU_RS12140	0.24	-1.7
2,694,459	+		PFLU_RS12140	0.24	+0.5
2,694,459	+		PFLU_RS12140	0.24	-0.9
2,694,459	+		PFLU_RS12140	0.24	-0.8
2,694,459	+		PFLU_RS12140	0.24	-1.2
2,694,459	+		PFLU_RS12140	0.24	-0.4
2,694,459	+		PFLU_RS12140	0.24	+2.1
2,694,459	+		PFLU_RS12140	0.24	-2.9
2,694,460	-		PFLU_RS12140	0.24	+1.1
2,694,460	-		PFLU_RS12140	0.24	+0.1
2,694,460	-		PFLU_RS12140	0.24	-0.3
2,694,460	-		PFLU_RS12140	0.24	+0.7
2,694,460	-		PFLU_RS12140	0.24	+0.4
2,694,460	-		PFLU_RS12140	0.24	-0.6
2,694,463	+		PFLU_RS12140	0.25	-0.3
2,694,463	+		PFLU_RS12140	0.25	-1.3
2,694,463	+		PFLU_RS12140	0.25	-0.3
2,694,463	+		PFLU_RS12140	0.25	-0.0
2,694,463	+		PFLU_RS12140	0.25	+0.1
2,694,464	-		PFLU_RS12140	0.25	+0.9
2,694,464	-		PFLU_RS12140	0.25	+0.3
2,694,533	-		PFLU_RS12140	0.45	+0.3
2,694,540	-		PFLU_RS12140	0.47	-3.1
2,694,540	-		PFLU_RS12140	0.47	+0.8
2,694,540	-		PFLU_RS12140	0.47	+0.1
2,694,540	-		PFLU_RS12140	0.47	+0.9
2,694,540	-		PFLU_RS12140	0.47	+0.4
2,694,546	+		PFLU_RS12140	0.49	+0.1
2,694,546	+		PFLU_RS12140	0.49	-1.7
2,694,546	+		PFLU_RS12140	0.49	-1.5
2,694,546	+		PFLU_RS12140	0.49	-0.5
2,694,546	+		PFLU_RS12140	0.49	-0.2
2,694,546	+		PFLU_RS12140	0.49	+1.6
2,694,547	-		PFLU_RS12140	0.49	+0.1
2,694,547	-		PFLU_RS12140	0.49	-1.0
2,694,547	-		PFLU_RS12140	0.49	-1.7
2,694,547	-		PFLU_RS12140	0.49	-1.0
2,694,547	-		PFLU_RS12140	0.49	-0.5
2,694,547	-		PFLU_RS12140	0.49	+0.5
2,694,547	-		PFLU_RS12140	0.49	+0.7
2,694,547	-		PFLU_RS12140	0.49	-0.7
2,694,715	+				-0.7
2,694,716	-				-0.7
2,694,741	+				+0.8
2,694,741	+				-0.7
2,694,742	-				-0.1
2,694,765	+				+0.8
2,694,765	+				+0.8
2,694,765	+				-1.3
2,694,766	-				+2.0
2,694,766	-				+0.7
2,694,767	+				+0.8
2,694,767	+				+1.9
2,694,767	+				+0.5
2,694,767	+				+0.4
2,694,767	+				-0.1
2,694,767	+				-1.4
2,694,767	+				-2.1
2,694,767	+				-0.5
2,694,768	-				+0.8
2,694,768	-				-0.5
2,694,768	-				-1.3
2,694,768	-				+1.7
2,694,768	-				-0.0
2,694,771	+				-0.7
2,694,771	+				-1.0
2,694,771	+				+0.2
2,694,771	+				-1.1
2,694,771	+				-1.5
2,694,772	-				+1.2
2,694,772	-				-0.4
2,694,772	-				-0.4
2,694,772	-				-1.4
2,694,772	-				+0.3
2,694,772	-				+0.1
2,694,772	-				+0.9
2,694,790	+				+0.6
2,694,803	+				+0.9