Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS29975

Experiment: D-Glucose (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C); with MOPS
6,665,810	+				-1.9
6,665,810	+				+1.7
6,666,048	+		PFLU_RS29970	0.19	+0.3
6,666,048	+		PFLU_RS29970	0.19	+0.1
6,666,048	+		PFLU_RS29970	0.19	+0.6
6,666,048	+		PFLU_RS29970	0.19	+0.7
6,666,048	+		PFLU_RS29970	0.19	-0.8
6,666,048	+		PFLU_RS29970	0.19	+0.3
6,666,048	+		PFLU_RS29970	0.19	+0.1
6,666,048	+		PFLU_RS29970	0.19	-0.8
6,666,048	+		PFLU_RS29970	0.19	+0.2
6,666,048	+		PFLU_RS29970	0.19	+0.2
6,666,048	+		PFLU_RS29970	0.19	+0.2
6,666,048	+		PFLU_RS29970	0.19	-0.2
6,666,048	+		PFLU_RS29970	0.19	+0.6
6,666,048	+		PFLU_RS29970	0.19	+1.3
6,666,048	+		PFLU_RS29970	0.19	+0.3
6,666,048	+		PFLU_RS29970	0.19	-1.0
6,666,048	+		PFLU_RS29970	0.19	+0.1
6,666,048	+		PFLU_RS29970	0.19	-0.8
6,666,048	+		PFLU_RS29970	0.19	-0.9
6,666,048	+		PFLU_RS29970	0.19	-0.6
6,666,048	+		PFLU_RS29970	0.19	+3.5
6,666,049	-		PFLU_RS29970	0.19	+2.2
6,666,049	-		PFLU_RS29970	0.19	-0.2
6,666,049	-		PFLU_RS29970	0.19	+1.4
6,666,049	-		PFLU_RS29970	0.19	+1.0
6,666,049	-		PFLU_RS29970	0.19	+0.1
6,666,049	-		PFLU_RS29970	0.19	+0.2
6,666,049	-		PFLU_RS29970	0.19	-3.2
6,666,049	-		PFLU_RS29970	0.19	+0.9
6,666,049	-		PFLU_RS29970	0.19	+0.3
6,666,049	-		PFLU_RS29970	0.19	-1.2
6,666,049	-		PFLU_RS29970	0.19	+0.7
6,666,049	-		PFLU_RS29970	0.19	+1.9
6,666,049	-		PFLU_RS29970	0.19	-0.6
6,666,049	-		PFLU_RS29970	0.19	+0.7
6,666,049	-		PFLU_RS29970	0.19	+0.8
6,666,049	-		PFLU_RS29970	0.19	+0.1
6,666,061	+		PFLU_RS29970	0.21	+1.2
6,666,062	-		PFLU_RS29970	0.21	-0.2
6,666,096	+		PFLU_RS29970	0.25	+0.6
6,666,097	-		PFLU_RS29970	0.25	+0.4
6,666,097	-		PFLU_RS29970	0.25	+0.2
6,666,097	-		PFLU_RS29970	0.25	+0.4
6,666,114	+		PFLU_RS29970	0.27	+0.1
6,666,115	-		PFLU_RS29970	0.27	-0.7
6,666,119	+		PFLU_RS29970	0.27	-1.2
6,666,119	+		PFLU_RS29970	0.27	+0.2
6,666,120	-		PFLU_RS29970	0.27	+0.5
6,666,120	-		PFLU_RS29970	0.27	+0.8
6,666,120	-		PFLU_RS29970	0.27	+1.2
6,666,120	-		PFLU_RS29970	0.27	+0.2
6,666,120	-		PFLU_RS29970	0.27	+0.5
6,666,152	+		PFLU_RS29970	0.31	+1.5
6,666,152	+		PFLU_RS29970	0.31	+2.2
6,666,152	+		PFLU_RS29970	0.31	-1.4
6,666,152	+		PFLU_RS29970	0.31	-0.2
6,666,152	+		PFLU_RS29970	0.31	+0.2
6,666,152	+		PFLU_RS29970	0.31	-1.7
6,666,152	+		PFLU_RS29970	0.31	+0.4
6,666,152	+		PFLU_RS29970	0.31	+0.9
6,666,153	-		PFLU_RS29970	0.31	+0.1
6,666,153	-		PFLU_RS29970	0.31	-0.2
6,666,153	-		PFLU_RS29970	0.31	+0.8
6,666,153	-		PFLU_RS29970	0.31	+0.2
6,666,153	-		PFLU_RS29970	0.31	-1.9
6,666,153	-		PFLU_RS29970	0.31	+1.4
6,666,156	+		PFLU_RS29970	0.31	+0.1
6,666,157	-		PFLU_RS29970	0.31	+0.2
6,666,157	-		PFLU_RS29970	0.31	+0.5
6,666,157	-		PFLU_RS29970	0.31	+1.0
6,666,159	+		PFLU_RS29970	0.32	+0.0
6,666,166	+		PFLU_RS29970	0.32	+0.4
6,666,166	+		PFLU_RS29970	0.32	+0.8
6,666,167	-		PFLU_RS29970	0.33	-2.5
6,666,167	-		PFLU_RS29970	0.33	-0.0
6,666,303	+		PFLU_RS29970	0.48	+0.2
6,666,303	+		PFLU_RS29970	0.48	+0.6
6,666,303	+		PFLU_RS29970	0.48	+0.2
6,666,304	-		PFLU_RS29970	0.48	-2.4
6,666,304	-		PFLU_RS29970	0.48	+1.2
6,666,307	+		PFLU_RS29970	0.48	-0.9
6,666,307	+		PFLU_RS29970	0.48	+0.4
6,666,307	+		PFLU_RS29970	0.48	+1.3
6,666,307	+		PFLU_RS29970	0.48	+1.2
6,666,307	+		PFLU_RS29970	0.48	-0.5
6,666,308	-		PFLU_RS29970	0.48	+0.1
6,666,308	-		PFLU_RS29970	0.48	+0.8
6,666,308	-		PFLU_RS29970	0.48	+0.1
6,666,308	-		PFLU_RS29970	0.48	+0.3
6,666,308	-		PFLU_RS29970	0.48	+0.5
6,666,560	+		PFLU_RS29970	0.76	+0.1
6,666,826	+				+1.4
6,666,826	+				-0.8
6,666,826	+				+0.3
6,666,826	+				-0.0
6,666,826	+				+0.8
6,666,826	+				+0.1
6,666,827	-				-0.9
6,666,827	-				-0.8
6,666,827	-				-1.1
6,666,827	-				+1.3
6,666,827	-				-0.2
6,666,827	-				-0.1
6,666,884	+		PFLU_RS29975	0.17	+0.6
6,666,935	+		PFLU_RS29975	0.25	-1.4
6,666,936	-		PFLU_RS29975	0.25	-0.5
6,666,936	-		PFLU_RS29975	0.25	+0.4
6,666,936	-		PFLU_RS29975	0.25	-0.2
6,667,483	+				+0.5
6,667,751	+		PFLU_RS29980	0.36	+0.4
6,667,751	+		PFLU_RS29980	0.36	-0.0
6,667,751	+		PFLU_RS29980	0.36	+0.1
6,667,752	-		PFLU_RS29980	0.36	-0.2
6,667,752	-		PFLU_RS29980	0.36	+2.6
6,667,752	-		PFLU_RS29980	0.36	-0.0
6,667,752	-		PFLU_RS29980	0.36	-0.2
6,667,752	-		PFLU_RS29980	0.36	+0.6
6,667,776	+		PFLU_RS29980	0.39	+0.2
6,667,776	+		PFLU_RS29980	0.39	-0.6
6,667,776	+		PFLU_RS29980	0.39	+1.3
6,667,776	+		PFLU_RS29980	0.39	+0.1
6,667,777	-		PFLU_RS29980	0.39	+0.2
6,667,777	-		PFLU_RS29980	0.39	+0.2
6,667,913	+		PFLU_RS29980	0.55	-0.5
6,667,913	+		PFLU_RS29980	0.55	+0.2
6,667,913	+		PFLU_RS29980	0.55	-0.8
6,667,913	+		PFLU_RS29980	0.55	-0.7
6,667,913	+		PFLU_RS29980	0.55	+0.8
6,667,913	+		PFLU_RS29980	0.55	-1.5
6,667,914	-		PFLU_RS29980	0.55	+0.1
6,667,914	-		PFLU_RS29980	0.55	+1.8
6,667,915	+		PFLU_RS29980	0.55	-1.4
6,667,915	+		PFLU_RS29980	0.55	-0.5
6,667,915	+		PFLU_RS29980	0.55	-0.7
6,667,915	+		PFLU_RS29980	0.55	-0.5
6,667,916	-		PFLU_RS29980	0.55	-0.7
6,667,916	-		PFLU_RS29980	0.55	+0.7
6,667,916	-		PFLU_RS29980	0.55	-0.0
6,668,154	+		PFLU_RS29980	0.83	+0.1
6,668,180	+		PFLU_RS29980	0.86	+0.2
6,668,180	+		PFLU_RS29980	0.86	-0.4
6,668,180	+		PFLU_RS29980	0.86	-0.1
6,668,180	+		PFLU_RS29980	0.86	-0.6
6,668,181	-		PFLU_RS29980	0.86	+0.9
6,668,183	+		PFLU_RS29980	0.86	+0.4
6,668,183	+		PFLU_RS29980	0.86	-0.6
6,668,184	-		PFLU_RS29980	0.86	-0.6
6,668,231	+				+0.8
6,668,231	+				+0.7
6,668,342	+				-0.0
6,668,342	+				-1.1
6,668,342	+				-0.3
6,668,342	+				-0.5
6,668,342	+				-1.2
6,668,342	+				+0.6
6,668,343	-				+0.8
6,668,343	-				-0.3
6,668,343	-				+0.7
6,668,343	-				-0.2
6,668,343	-				-1.6