Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS19260

Experiment: D-Glucose (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C); with MOPS
4,355,310	+		PFLU_RS19255	0.41	+0.7
4,355,310	+		PFLU_RS19255	0.41	+0.0
4,355,526	+		PFLU_RS19255	0.56	-1.3
4,355,526	+		PFLU_RS19255	0.56	+0.3
4,355,526	+		PFLU_RS19255	0.56	-0.1
4,355,526	+		PFLU_RS19255	0.56	+0.2
4,355,526	+		PFLU_RS19255	0.56	-0.0
4,355,527	-		PFLU_RS19255	0.56	+0.3
4,355,527	-		PFLU_RS19255	0.56	-1.2
4,355,527	-		PFLU_RS19255	0.56	+0.6
4,355,527	-		PFLU_RS19255	0.56	+0.2
4,356,120	+				+0.5
4,356,120	+				+0.5
4,356,141	+				-0.3
4,356,142	-				+0.7
4,356,142	-				+0.2
4,356,142	-				+0.1
4,356,142	-				-0.6
4,356,142	-				+0.2
4,356,151	+				+0.2
4,356,206	+				+0.3
4,356,206	+				+0.5
4,356,206	+				+1.0
4,356,207	-				+1.2
4,356,207	-				-0.2
4,356,207	-				+1.3
4,356,311	+		PFLU_RS19260	0.15	+1.0
4,356,312	-		PFLU_RS19260	0.15	-0.0
4,356,403	-		PFLU_RS19260	0.22	-0.3
4,356,587	+		PFLU_RS19260	0.36	+2.0
4,356,587	+		PFLU_RS19260	0.36	-0.7
4,356,587	+		PFLU_RS19260	0.36	-0.7
4,356,588	-		PFLU_RS19260	0.37	-2.3
4,356,588	-		PFLU_RS19260	0.37	-1.0
4,356,620	+		PFLU_RS19260	0.39	+1.0
4,356,620	+		PFLU_RS19260	0.39	+0.5
4,356,620	+		PFLU_RS19260	0.39	-0.1
4,356,620	+		PFLU_RS19260	0.39	-0.5
4,356,620	+		PFLU_RS19260	0.39	-1.9
4,356,620	+		PFLU_RS19260	0.39	+0.2
4,356,620	+		PFLU_RS19260	0.39	+1.2
4,356,620	+		PFLU_RS19260	0.39	-0.7
4,356,620	+		PFLU_RS19260	0.39	-0.1
4,356,621	-		PFLU_RS19260	0.39	-0.6
4,356,621	-		PFLU_RS19260	0.39	-0.7
4,356,621	-		PFLU_RS19260	0.39	-0.3
4,357,049	+		PFLU_RS19260	0.73	-0.8
4,357,049	+		PFLU_RS19260	0.73	-0.6
4,357,050	-		PFLU_RS19260	0.73	+0.3
4,357,091	-		PFLU_RS19260	0.76	-1.0
4,357,091	-		PFLU_RS19260	0.76	+0.6
4,357,121	+		PFLU_RS19260	0.78	-0.5
4,357,121	+		PFLU_RS19260	0.78	-1.3
4,357,121	+		PFLU_RS19260	0.78	+0.1
4,357,121	+		PFLU_RS19260	0.78	+0.5
4,357,121	+		PFLU_RS19260	0.78	+0.2
4,357,121	+		PFLU_RS19260	0.78	+0.2
4,357,122	-		PFLU_RS19260	0.78	-0.0
4,357,122	-		PFLU_RS19260	0.78	-0.5
4,357,122	-		PFLU_RS19260	0.78	+0.4
4,357,122	-		PFLU_RS19260	0.78	-3.5
4,357,122	-		PFLU_RS19260	0.78	+1.2
4,357,122	-		PFLU_RS19260	0.78	-1.4
4,357,122	-		PFLU_RS19260	0.78	-0.9
4,357,192	+		PFLU_RS19260	0.84	+0.6
4,357,192	+		PFLU_RS19260	0.84	-1.5
4,357,193	-		PFLU_RS19260	0.84	-0.1
4,357,244	+		PFLU_RS19260	0.88	-2.1
4,357,245	-		PFLU_RS19260	0.88	+0.9
4,357,313	-				-1.0
4,357,394	+				-0.2
4,357,395	-				-1.3
4,357,402	+				-0.3
4,357,403	-				+0.6
4,357,565	+				-1.0
4,357,565	+				+0.5
4,357,566	-				-1.1
4,357,566	-				+0.2
4,357,641	+		PFLU_RS19265	0.20	+0.7
4,357,642	-		PFLU_RS19265	0.20	-0.6
4,357,642	-		PFLU_RS19265	0.20	-0.3
4,357,668	+		PFLU_RS19265	0.24	+1.2
4,357,668	+		PFLU_RS19265	0.24	-0.7
4,357,668	+		PFLU_RS19265	0.24	+0.6
4,357,668	+		PFLU_RS19265	0.24	-0.3
4,357,668	+		PFLU_RS19265	0.24	+1.6
4,357,668	+		PFLU_RS19265	0.24	-1.6
4,357,668	+		PFLU_RS19265	0.24	+0.4
4,357,668	+		PFLU_RS19265	0.24	+0.7
4,357,668	+		PFLU_RS19265	0.24	+0.6
4,357,668	+		PFLU_RS19265	0.24	-1.4
4,357,669	-		PFLU_RS19265	0.24	-0.8
4,357,669	-		PFLU_RS19265	0.24	+1.7
4,357,669	-		PFLU_RS19265	0.24	-0.7
4,357,669	-		PFLU_RS19265	0.24	-0.9
4,357,669	-		PFLU_RS19265	0.24	-0.8
4,357,669	-		PFLU_RS19265	0.24	+1.0
4,357,669	-		PFLU_RS19265	0.24	-0.8
4,357,669	-		PFLU_RS19265	0.24	-0.7
4,357,669	-		PFLU_RS19265	0.24	+0.5
4,357,755	+		PFLU_RS19265	0.38	+0.2
4,357,830	+		PFLU_RS19265	0.50	-1.9
4,357,867	+		PFLU_RS19265	0.56	+0.6
4,357,868	-		PFLU_RS19265	0.57	+0.1
4,357,869	+		PFLU_RS19265	0.57	-0.8
4,357,869	+		PFLU_RS19265	0.57	+0.6
4,357,869	+		PFLU_RS19265	0.57	-1.4
4,357,869	+		PFLU_RS19265	0.57	-2.3
4,357,869	+		PFLU_RS19265	0.57	+0.5
4,357,869	+		PFLU_RS19265	0.57	-0.8
4,357,869	+		PFLU_RS19265	0.57	+1.7
4,357,869	+		PFLU_RS19265	0.57	-1.5
4,357,870	-		PFLU_RS19265	0.57	-1.3
4,357,870	-		PFLU_RS19265	0.57	-0.2
4,357,870	-		PFLU_RS19265	0.57	+1.1
4,357,870	-		PFLU_RS19265	0.57	+0.9
4,357,870	-		PFLU_RS19265	0.57	+1.1
4,357,963	-		PFLU_RS19265	0.72	+1.3
4,357,986	+		PFLU_RS19265	0.76	-1.3
4,357,986	+		PFLU_RS19265	0.76	+0.3
4,357,986	+		PFLU_RS19265	0.76	-0.4
4,357,986	+		PFLU_RS19265	0.76	-2.7
4,357,986	+		PFLU_RS19265	0.76	-0.3
4,357,986	+		PFLU_RS19265	0.76	+1.7
4,357,986	+		PFLU_RS19265	0.76	+0.3
4,357,986	+		PFLU_RS19265	0.76	-2.5
4,357,987	-		PFLU_RS19265	0.76	+0.5
4,357,987	-		PFLU_RS19265	0.76	+0.4
4,357,987	-		PFLU_RS19265	0.76	+0.5
4,357,987	-		PFLU_RS19265	0.76	+1.5
4,357,987	-		PFLU_RS19265	0.76	-1.3
4,357,989	+		PFLU_RS19265	0.76	+0.3
4,357,989	+		PFLU_RS19265	0.76	+0.8
4,357,989	+		PFLU_RS19265	0.76	-0.7
4,357,989	+		PFLU_RS19265	0.76	+1.3
4,357,990	-		PFLU_RS19265	0.76	+0.5
4,357,990	-		PFLU_RS19265	0.76	+0.3
4,358,052	+		PFLU_RS19265	0.86	-0.0
4,358,052	+		PFLU_RS19265	0.86	+0.3
4,358,053	-		PFLU_RS19265	0.86	+0.6
4,358,171	+				-0.1
4,358,171	+				+0.3
4,358,171	+				+1.1
4,358,172	-				-1.2
4,358,184	-				+0.6
4,358,184	-				-1.3
4,358,184	-				+0.4
4,358,216	+				-1.7
4,358,216	+				+0.1
4,358,217	-				-2.2
4,358,231	+				-0.3
4,358,246	-				+0.8