Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS18305

Experiment: D-Glucose (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C); with MOPS
4,152,497	+		PFLU_RS18295	0.80	+0.7
4,152,498	-		PFLU_RS18295	0.81	+0.3
4,152,531	-		PFLU_RS18295	0.86	+0.3
4,152,666	+				-1.8
4,152,666	+				-0.4
4,152,666	+				-0.1
4,152,667	-				+1.5
4,152,838	+		PFLU_RS30890	0.33	+1.2
4,152,838	+		PFLU_RS30890	0.33	+1.0
4,152,838	+		PFLU_RS30890	0.33	-0.9
4,152,838	+		PFLU_RS30890	0.33	-0.3
4,152,838	+		PFLU_RS30890	0.33	+0.4
4,152,838	+		PFLU_RS30890	0.33	+0.6
4,152,839	-		PFLU_RS30890	0.33	+1.2
4,152,839	-		PFLU_RS30890	0.33	-0.1
4,152,839	-		PFLU_RS30890	0.33	-2.6
4,152,839	-		PFLU_RS30890	0.33	+0.6
4,152,839	-		PFLU_RS30890	0.33	+0.5
4,152,839	-		PFLU_RS30890	0.33	-1.7
4,152,839	-		PFLU_RS30890	0.33	-0.2
4,152,839	-		PFLU_RS30890	0.33	+0.4
4,152,839	-		PFLU_RS30890	0.33	+0.8
4,153,240	+				-1.4
4,153,306	+				+1.4
4,153,306	+				+0.4
4,153,306	+				-0.3
4,153,307	-				-2.9
4,153,307	-				-1.5
4,153,338	-				-1.0
4,153,344	+				+3.8
4,153,345	-				-0.3
4,153,355	+				-0.2
4,153,355	+				+0.7
4,153,358	+				-2.8
4,153,358	+				+1.9
4,153,358	+				-0.7
4,153,358	+				+0.6
4,153,358	+				+0.2
4,153,358	+				+0.5
4,153,358	+				-0.2
4,153,358	+				-2.6
4,153,358	+				+1.4
4,153,358	+				+1.0
4,153,358	+				+0.9
4,153,358	+				-0.1
4,153,358	+				-0.4
4,153,359	-				+1.8
4,153,359	-				+0.2
4,153,359	-				-0.6
4,153,359	-				-1.6
4,153,359	-				-2.3
4,153,359	-				-0.3
4,153,359	-				-0.4
4,153,359	-				+0.7
4,153,359	-				-0.3
4,153,359	-				-0.1
4,153,362	+				+0.2
4,153,362	+				-0.0
4,153,362	+				-1.0
4,153,362	+				-2.3
4,153,362	+				+0.7
4,153,362	+				+0.4
4,153,362	+				-1.2
4,153,362	+				+1.7
4,153,362	+				+0.2
4,153,362	+				-0.9
4,153,362	+				-0.2
4,153,362	+				-1.4
4,153,362	+				+0.9
4,153,363	-				+0.5
4,153,363	-				+0.3
4,153,363	-				+0.9
4,153,363	-				-1.7
4,153,363	-				-1.5
4,153,363	-				-0.3
4,153,363	-				-0.6
4,153,425	+				-0.8
4,153,425	+				-0.8
4,153,425	+				-0.2
4,153,426	-				-0.8
4,153,426	-				+0.3
4,153,426	-				-0.4
4,153,426	-				+1.5
4,153,426	-				+0.3
4,153,426	-				-1.2
4,153,426	-				+0.9
4,153,431	-				+0.3
4,153,438	+				-0.3
4,153,439	-				+0.1
4,153,448	-				-1.4
4,153,448	-				-0.1
4,153,461	+				-0.4
4,153,461	+				-0.8
4,153,462	-				-1.6
4,153,462	-				+1.0
4,153,462	-				-0.3
4,153,462	-				+3.0
4,153,462	-				-0.9
4,153,530	+		PFLU_RS18305	0.26	+0.7
4,153,530	+		PFLU_RS18305	0.26	+0.8
4,153,530	+		PFLU_RS18305	0.26	-0.1
4,153,530	+		PFLU_RS18305	0.26	+0.8
4,153,531	-		PFLU_RS18305	0.26	-0.2
4,153,531	-		PFLU_RS18305	0.26	+2.8
4,153,531	-		PFLU_RS18305	0.26	-1.2
4,153,531	-		PFLU_RS18305	0.26	+0.5
4,153,531	-		PFLU_RS18305	0.26	-1.8
4,153,619	+		PFLU_RS18305	0.59	-0.2
4,153,619	+		PFLU_RS18305	0.59	-0.4
4,153,619	+		PFLU_RS18305	0.59	-0.7
4,153,620	-		PFLU_RS18305	0.59	+0.8
4,153,620	-		PFLU_RS18305	0.59	-2.1
4,153,622	+		PFLU_RS18305	0.60	+1.0
4,153,622	+		PFLU_RS18305	0.60	-0.8
4,153,622	+		PFLU_RS18305	0.60	+0.4
4,153,623	-		PFLU_RS18305	0.60	+0.5
4,153,652	+		PFLU_RS18305	0.71	+0.8
4,153,653	-		PFLU_RS18305	0.71	-0.1
4,153,676	-		PFLU_RS18305	0.80	-1.4
4,153,688	+		PFLU_RS18305	0.84	+0.4
4,153,688	+		PFLU_RS18305	0.84	+1.0
4,153,688	+		PFLU_RS18305	0.84	+0.8
4,153,689	-		PFLU_RS18305	0.85	+0.4
4,153,689	-		PFLU_RS18305	0.85	+1.0
4,153,702	+		PFLU_RS18305	0.90	+1.4
4,153,718	+				+1.7
4,153,723	+				+0.6
4,153,724	-				-0.1
4,153,766	+				-1.6
4,153,766	+				-0.3
4,153,766	+				-1.7
4,153,807	+				+1.0
4,153,807	+				-0.4
4,153,808	-				-0.8
4,153,808	-				+0.5
4,153,808	-				-0.4
4,153,808	-				-0.4
4,153,820	-				+0.0
4,153,836	+				+0.3
4,153,951	+				-0.4
4,153,951	+				+1.0
4,153,951	+				-0.4
4,153,951	+				-0.0
4,153,952	-				+1.2
4,153,962	+				+0.5
4,153,962	+				-2.5
4,153,962	+				+2.5
4,153,962	+				+1.3
4,153,963	-				+0.5
4,154,188	+		PFLU_RS18310	0.37	+1.5
4,154,188	+		PFLU_RS18310	0.37	-0.8
4,154,188	+		PFLU_RS18310	0.37	-0.2
4,154,188	+		PFLU_RS18310	0.37	+0.1
4,154,188	+		PFLU_RS18310	0.37	-0.2
4,154,189	-		PFLU_RS18310	0.37	+0.5
4,154,189	-		PFLU_RS18310	0.37	+0.7
4,154,189	-		PFLU_RS18310	0.37	-0.1
4,154,189	-		PFLU_RS18310	0.37	+0.4
4,154,189	-		PFLU_RS18310	0.37	+0.7
4,154,189	-		PFLU_RS18310	0.37	-0.1
4,154,189	-		PFLU_RS18310	0.37	-0.8
4,154,189	-		PFLU_RS18310	0.37	-0.5
4,154,189	-		PFLU_RS18310	0.37	-2.0
4,154,239	+		PFLU_RS18310	0.44	-0.9
4,154,239	+		PFLU_RS18310	0.44	+1.5
4,154,239	+		PFLU_RS18310	0.44	+0.1
4,154,239	+		PFLU_RS18310	0.44	+0.3
4,154,239	+		PFLU_RS18310	0.44	+1.3
4,154,239	+		PFLU_RS18310	0.44	+0.9
4,154,240	-		PFLU_RS18310	0.44	+1.7
4,154,240	-		PFLU_RS18310	0.44	+0.4
4,154,240	-		PFLU_RS18310	0.44	+0.0
4,154,240	-		PFLU_RS18310	0.44	-0.5
4,154,240	-		PFLU_RS18310	0.44	+1.2
4,154,240	-		PFLU_RS18310	0.44	-0.0
4,154,240	-		PFLU_RS18310	0.44	-0.8
4,154,240	-		PFLU_RS18310	0.44	+1.9
4,154,240	-		PFLU_RS18310	0.44	+0.4
4,154,240	-		PFLU_RS18310	0.44	+0.4
4,154,240	-		PFLU_RS18310	0.44	+0.2
4,154,240	-		PFLU_RS18310	0.44	+1.1
4,154,240	-		PFLU_RS18310	0.44	-1.3
4,154,240	-		PFLU_RS18310	0.44	+0.2
4,154,243	+		PFLU_RS18310	0.45	-0.3
4,154,243	+		PFLU_RS18310	0.45	+0.2
4,154,243	+		PFLU_RS18310	0.45	+1.4
4,154,244	-		PFLU_RS18310	0.45	-0.4
4,154,244	-		PFLU_RS18310	0.45	+0.5
4,154,244	-		PFLU_RS18310	0.45	+0.1
4,154,244	-		PFLU_RS18310	0.45	-1.6
4,154,244	-		PFLU_RS18310	0.45	-2.3
4,154,287	+		PFLU_RS18310	0.51	+0.4
4,154,287	+		PFLU_RS18310	0.51	-0.9
4,154,287	+		PFLU_RS18310	0.51	-1.0
4,154,287	+		PFLU_RS18310	0.51	-0.4
4,154,287	+		PFLU_RS18310	0.51	+1.9
4,154,288	-		PFLU_RS18310	0.51	-0.3
4,154,425	+		PFLU_RS18310	0.69	-0.1
4,154,425	+		PFLU_RS18310	0.69	+0.0
4,154,426	-		PFLU_RS18310	0.69	-0.4
4,154,426	-		PFLU_RS18310	0.69	+0.3
4,154,426	-		PFLU_RS18310	0.69	-1.0
4,154,426	-		PFLU_RS18310	0.69	-0.6
4,154,432	+		PFLU_RS18310	0.70	+0.6
4,154,432	+		PFLU_RS18310	0.70	+0.1
4,154,432	+		PFLU_RS18310	0.70	+1.1
4,154,432	+		PFLU_RS18310	0.70	-0.9
4,154,432	+		PFLU_RS18310	0.70	+0.4
4,154,433	-		PFLU_RS18310	0.70	-0.4
4,154,433	-		PFLU_RS18310	0.70	+0.5
4,154,433	-		PFLU_RS18310	0.70	-0.1
4,154,433	-		PFLU_RS18310	0.70	+0.2
4,154,446	+		PFLU_RS18310	0.72	+1.8
4,154,446	+		PFLU_RS18310	0.72	-0.4
4,154,642	+				+1.1
4,154,642	+				+0.2
4,154,642	+				-0.1
4,154,643	-				+0.8
4,154,643	-				-2.0
4,154,643	-				-0.4
4,154,714	+				+1.6