Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS12400

Experiment: D-Glucose (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C); with MOPS
2,748,385	+		PFLU_RS12390	0.56	+0.0
2,748,417	+		PFLU_RS12390	0.58	+0.0
2,748,417	+		PFLU_RS12390	0.58	-0.2
2,748,418	-		PFLU_RS12390	0.58	+1.2
2,748,418	-		PFLU_RS12390	0.58	+0.9
2,748,418	-		PFLU_RS12390	0.58	-1.1
2,748,418	-		PFLU_RS12390	0.58	-0.1
2,748,555	+		PFLU_RS12390	0.70	-1.1
2,748,556	-		PFLU_RS12390	0.70	-0.6
2,748,612	+		PFLU_RS12390	0.74	+1.4
2,748,612	+		PFLU_RS12390	0.74	-0.1
2,748,612	+		PFLU_RS12390	0.74	+1.3
2,748,612	+		PFLU_RS12390	0.74	-0.4
2,748,613	-		PFLU_RS12390	0.74	+0.4
2,748,613	-		PFLU_RS12390	0.74	+0.4
2,748,613	-		PFLU_RS12390	0.74	-2.4
2,748,660	+		PFLU_RS12390	0.78	+0.4
2,748,661	-		PFLU_RS12390	0.78	+1.5
2,748,661	-		PFLU_RS12390	0.78	+0.4
2,748,711	+		PFLU_RS12390	0.82	-1.3
2,748,711	+		PFLU_RS12390	0.82	+0.9
2,748,711	+		PFLU_RS12390	0.82	-0.2
2,748,711	+		PFLU_RS12390	0.82	+0.0
2,748,712	-		PFLU_RS12390	0.82	-1.8
2,748,712	-		PFLU_RS12390	0.82	+0.4
2,748,712	-		PFLU_RS12390	0.82	+0.1
2,748,729	+		PFLU_RS12390	0.84	+0.0
2,748,782	+		PFLU_RS12390	0.88	+1.0
2,748,783	-		PFLU_RS12390	0.88	+1.0
2,748,927	+				-1.6
2,748,928	-				+0.0
2,748,941	+				+0.2
2,748,942	-				+0.4
2,748,947	+				-0.6
2,748,948	-				+0.6
2,749,000	+		PFLU_RS12395	0.20	+1.0
2,749,001	-		PFLU_RS12395	0.20	+1.2
2,749,001	-		PFLU_RS12395	0.20	-0.6
2,749,148	+		PFLU_RS12395	0.62	+0.5
2,749,149	-		PFLU_RS12395	0.62	-2.6
2,749,278	-				-0.2
2,749,293	+				+0.0
2,749,293	+				+0.6
2,749,293	+				+0.7
2,749,294	-				+0.2
2,749,294	-				+0.1
2,749,294	-				-0.8
2,749,338	+				-0.6
2,749,352	+				+0.6
2,749,352	+				+0.5
2,749,352	+				-2.9
2,749,353	-				+0.5
2,749,353	-				-0.3
2,749,472	+		PFLU_RS12400	0.17	+0.2
2,749,473	-		PFLU_RS12400	0.17	-0.6
2,749,493	+		PFLU_RS12400	0.19	-1.8
2,749,493	+		PFLU_RS12400	0.19	-0.5
2,749,493	+		PFLU_RS12400	0.19	+0.5
2,749,493	+		PFLU_RS12400	0.19	-0.3
2,749,493	+		PFLU_RS12400	0.19	-0.0
2,749,494	-		PFLU_RS12400	0.19	+1.3
2,749,494	-		PFLU_RS12400	0.19	+0.5
2,749,494	-		PFLU_RS12400	0.19	+0.9
2,749,494	-		PFLU_RS12400	0.19	-0.1
2,749,494	-		PFLU_RS12400	0.19	+2.3
2,749,494	-		PFLU_RS12400	0.19	-0.7
2,749,494	-		PFLU_RS12400	0.19	-2.2
2,749,579	+		PFLU_RS12400	0.27	-2.6
2,749,580	-		PFLU_RS12400	0.27	-0.1
2,749,640	+		PFLU_RS12400	0.33	-2.3
2,749,641	-		PFLU_RS12400	0.33	-0.5
2,749,641	-		PFLU_RS12400	0.33	-0.2
2,749,641	-		PFLU_RS12400	0.33	-0.2
2,749,642	+		PFLU_RS12400	0.33	+1.0
2,749,642	+		PFLU_RS12400	0.33	-1.2
2,749,642	+		PFLU_RS12400	0.33	-0.1
2,749,643	-		PFLU_RS12400	0.33	+1.5
2,749,653	+		PFLU_RS12400	0.34	-0.2
2,749,745	+		PFLU_RS12400	0.43	+0.2
2,749,745	+		PFLU_RS12400	0.43	-0.2
2,749,745	+		PFLU_RS12400	0.43	-0.0
2,749,745	+		PFLU_RS12400	0.43	-0.1
2,749,745	+		PFLU_RS12400	0.43	+1.0
2,749,745	+		PFLU_RS12400	0.43	+0.5
2,749,746	-		PFLU_RS12400	0.43	+0.5
2,749,746	-		PFLU_RS12400	0.43	+0.3
2,749,746	-		PFLU_RS12400	0.43	+1.0
2,749,746	-		PFLU_RS12400	0.43	+0.3
2,749,746	-		PFLU_RS12400	0.43	+0.2
2,749,746	-		PFLU_RS12400	0.43	+0.7
2,749,746	-		PFLU_RS12400	0.43	+0.2
2,749,746	-		PFLU_RS12400	0.43	+0.7
2,749,787	-		PFLU_RS12400	0.47	-1.9
2,749,805	+		PFLU_RS12400	0.49	+0.3
2,749,868	+		PFLU_RS12400	0.55	-0.2
2,749,868	+		PFLU_RS12400	0.55	-1.9
2,749,868	+		PFLU_RS12400	0.55	-3.2
2,749,868	+		PFLU_RS12400	0.55	-0.3
2,749,868	+		PFLU_RS12400	0.55	+0.5
2,749,868	+		PFLU_RS12400	0.55	-0.9
2,749,868	+		PFLU_RS12400	0.55	-0.8
2,749,868	+		PFLU_RS12400	0.55	+0.0
2,749,869	-		PFLU_RS12400	0.55	-1.0
2,749,869	-		PFLU_RS12400	0.55	+0.7
2,749,870	+		PFLU_RS12400	0.55	-2.6
2,749,870	+		PFLU_RS12400	0.55	-0.2
2,749,870	+		PFLU_RS12400	0.55	+0.3
2,749,870	+		PFLU_RS12400	0.55	-0.5
2,749,870	+		PFLU_RS12400	0.55	-2.3
2,749,870	+		PFLU_RS12400	0.55	-0.6
2,749,870	+		PFLU_RS12400	0.55	-2.5
2,749,870	+		PFLU_RS12400	0.55	+1.0
2,749,870	+		PFLU_RS12400	0.55	+0.6
2,749,870	+		PFLU_RS12400	0.55	+1.0
2,749,870	+		PFLU_RS12400	0.55	-0.6
2,749,870	+		PFLU_RS12400	0.55	+1.3
2,749,870	+		PFLU_RS12400	0.55	+0.7
2,749,870	+		PFLU_RS12400	0.55	+0.7
2,749,870	+		PFLU_RS12400	0.55	-0.7
2,749,870	+		PFLU_RS12400	0.55	+0.7
2,749,870	+		PFLU_RS12400	0.55	-0.4
2,749,870	+		PFLU_RS12400	0.55	-1.8
2,749,870	+		PFLU_RS12400	0.55	+0.9
2,749,870	+		PFLU_RS12400	0.55	+1.0
2,749,870	+		PFLU_RS12400	0.55	+0.4
2,749,870	+		PFLU_RS12400	0.55	-0.2
2,749,870	+		PFLU_RS12400	0.55	+0.3
2,749,871	-		PFLU_RS12400	0.55	+1.4
2,749,871	-		PFLU_RS12400	0.55	-0.8
2,749,871	-		PFLU_RS12400	0.55	-2.2
2,749,871	-		PFLU_RS12400	0.55	+1.0
2,749,871	-		PFLU_RS12400	0.55	+0.4
2,749,871	-		PFLU_RS12400	0.55	+0.0
2,749,871	-		PFLU_RS12400	0.55	-1.0
2,749,871	-		PFLU_RS12400	0.55	-1.6
2,749,871	-		PFLU_RS12400	0.55	-0.6
2,749,871	-		PFLU_RS12400	0.55	-0.6
2,749,871	-		PFLU_RS12400	0.55	-0.4
2,749,871	-		PFLU_RS12400	0.55	-1.1
2,749,871	-		PFLU_RS12400	0.55	+0.3
2,749,871	-		PFLU_RS12400	0.55	-0.6
2,749,871	-		PFLU_RS12400	0.55	+0.4
2,749,871	-		PFLU_RS12400	0.55	-0.3
2,749,871	-		PFLU_RS12400	0.55	+0.1
2,749,871	-		PFLU_RS12400	0.55	+1.1
2,749,871	-		PFLU_RS12400	0.55	-0.9
2,749,871	-		PFLU_RS12400	0.55	+0.1
2,749,871	-		PFLU_RS12400	0.55	-0.6
2,749,871	-		PFLU_RS12400	0.55	-1.5
2,749,871	-		PFLU_RS12400	0.55	-0.2
2,749,871	-		PFLU_RS12400	0.55	-0.2
2,749,871	-		PFLU_RS12400	0.55	-0.7
2,749,871	-		PFLU_RS12400	0.55	+0.7
2,749,871	-		PFLU_RS12400	0.55	-0.6
2,749,871	-		PFLU_RS12400	0.55	-0.6
2,749,871	-		PFLU_RS12400	0.55	-1.6
2,749,871	-		PFLU_RS12400	0.55	+1.3
2,749,871	-		PFLU_RS12400	0.55	+0.3
2,749,871	-		PFLU_RS12400	0.55	-0.6
2,749,871	-		PFLU_RS12400	0.55	+1.0
2,749,871	-		PFLU_RS12400	0.55	-0.1
2,749,875	-		PFLU_RS12400	0.56	+0.3
2,749,875	-		PFLU_RS12400	0.56	-1.3
2,749,875	-		PFLU_RS12400	0.56	+0.8
2,749,927	+		PFLU_RS12400	0.61	+0.3
2,749,928	-		PFLU_RS12400	0.61	+0.4
2,749,934	+		PFLU_RS12400	0.61	-2.0
2,749,934	+		PFLU_RS12400	0.61	+0.7
2,749,935	-		PFLU_RS12400	0.61	-1.4
2,749,935	-		PFLU_RS12400	0.61	-0.5
2,749,935	-		PFLU_RS12400	0.61	-0.9
2,749,935	-		PFLU_RS12400	0.61	+0.3
2,749,973	+		PFLU_RS12400	0.65	-2.4
2,749,974	-		PFLU_RS12400	0.65	+0.4
2,749,979	+		PFLU_RS12400	0.66	-1.1
2,749,979	+		PFLU_RS12400	0.66	-0.3
2,749,980	-		PFLU_RS12400	0.66	-0.2
2,750,144	+		PFLU_RS12400	0.81	-2.0
2,750,208	-		PFLU_RS12400	0.87	+0.9
2,750,274	+				+0.8
2,750,317	+				-0.4
2,750,351	-				-0.1
2,750,642	+		PFLU_RS12405	0.31	+0.3
2,750,642	+		PFLU_RS12405	0.31	+0.0
2,750,643	-		PFLU_RS12405	0.31	+0.4
2,750,643	-		PFLU_RS12405	0.31	+1.3
2,750,643	-		PFLU_RS12405	0.31	+0.2
2,750,699	+		PFLU_RS12405	0.37	-0.3
2,750,699	+		PFLU_RS12405	0.37	-0.1
2,750,700	-		PFLU_RS12405	0.37	-2.1
2,750,700	-		PFLU_RS12405	0.37	+0.2
2,750,757	+		PFLU_RS12405	0.43	-1.4
2,750,757	+		PFLU_RS12405	0.43	+0.3
2,750,758	-		PFLU_RS12405	0.43	-0.6
2,750,775	+		PFLU_RS12405	0.45	+1.6
2,750,896	+		PFLU_RS12405	0.57	-0.6
2,750,896	+		PFLU_RS12405	0.57	-0.9
2,750,932	-		PFLU_RS12405	0.61	-1.0
2,750,932	-		PFLU_RS12405	0.61	-1.8
2,751,008	-		PFLU_RS12405	0.69	+0.4
2,751,305	+				+0.9
2,751,306	-				-2.4
2,751,317	-				-0.4
2,751,317	-				-0.2
2,751,321	+				-1.4
2,751,321	+				-1.9
2,751,321	+				+1.4
2,751,321	+				-1.2
2,751,321	+				-0.4
2,751,322	-				+0.7
2,751,322	-				-1.1
2,751,322	-				-1.3
2,751,324	-				-0.6