Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS09080

Experiment: D-Glucose (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C); with MOPS
2,012,186	+		PFLU_RS09070	0.79	-0.2
2,012,186	+		PFLU_RS09070	0.79	+1.3
2,012,186	+		PFLU_RS09070	0.79	-0.3
2,012,186	+		PFLU_RS09070	0.79	+0.4
2,012,186	+		PFLU_RS09070	0.79	-0.1
2,012,186	+		PFLU_RS09070	0.79	-0.4
2,012,187	-		PFLU_RS09070	0.79	+0.2
2,012,187	-		PFLU_RS09070	0.79	+0.5
2,012,187	-		PFLU_RS09070	0.79	+0.2
2,012,187	-		PFLU_RS09070	0.79	-0.3
2,012,187	-		PFLU_RS09070	0.79	+0.9
2,012,250	+		PFLU_RS09070	0.82	-1.4
2,012,250	+		PFLU_RS09070	0.82	+2.6
2,012,277	+		PFLU_RS09070	0.84	+1.5
2,012,480	+				-0.3
2,012,480	+				-2.4
2,012,480	+				+1.7
2,012,480	+				-0.1
2,012,480	+				-0.3
2,012,481	-				+0.4
2,012,481	-				-0.5
2,012,481	-				-0.4
2,012,481	-				-0.1
2,012,481	-				-0.5
2,012,481	-				-0.0
2,012,481	-				+0.4
2,012,481	-				-0.5
2,012,481	-				-0.7
2,012,537	+				-1.9
2,012,538	-				+0.3
2,012,538	-				+1.0
2,012,548	+				+0.6
2,012,548	+				+0.5
2,012,548	+				-0.9
2,012,584	+				+0.6
2,012,584	+				-0.8
2,012,783	+		PFLU_RS09075	0.48	-0.1
2,012,783	+		PFLU_RS09075	0.48	+0.0
2,012,783	+		PFLU_RS09075	0.48	-0.6
2,012,810	+		PFLU_RS09075	0.54	-0.7
2,012,810	+		PFLU_RS09075	0.54	+0.4
2,012,810	+		PFLU_RS09075	0.54	-1.0
2,012,810	+		PFLU_RS09075	0.54	+0.0
2,012,810	+		PFLU_RS09075	0.54	+0.3
2,012,810	+		PFLU_RS09075	0.54	+0.9
2,012,810	+		PFLU_RS09075	0.54	+0.9
2,012,810	+		PFLU_RS09075	0.54	+0.5
2,012,810	+		PFLU_RS09075	0.54	-1.9
2,012,810	+		PFLU_RS09075	0.54	+0.5
2,012,810	+		PFLU_RS09075	0.54	+0.2
2,012,811	-		PFLU_RS09075	0.54	-0.9
2,012,811	-		PFLU_RS09075	0.54	+0.0
2,012,811	-		PFLU_RS09075	0.54	+1.0
2,012,811	-		PFLU_RS09075	0.54	-0.5
2,012,811	-		PFLU_RS09075	0.54	+0.6
2,012,811	-		PFLU_RS09075	0.54	+1.0
2,012,811	-		PFLU_RS09075	0.54	-1.3
2,012,811	-		PFLU_RS09075	0.54	+0.2
2,012,811	-		PFLU_RS09075	0.54	+1.3
2,012,811	-		PFLU_RS09075	0.54	-0.3
2,012,811	-		PFLU_RS09075	0.54	-0.1
2,013,045	+				-0.3
2,013,045	+				+0.4
2,013,045	+				+1.2
2,013,045	+				-1.3
2,013,045	+				-0.4
2,013,045	+				+1.0
2,013,045	+				-2.0
2,013,046	-				+0.3
2,013,046	-				-0.6
2,013,046	-				+0.4
2,013,046	-				-0.6
2,013,046	-				+0.5
2,013,046	-				+1.0
2,013,046	-				-0.3
2,013,046	-				+0.7
2,013,046	-				-0.2
2,013,046	-				-1.7
2,013,061	+				-0.0
2,013,061	+				-0.0
2,013,061	+				-0.1
2,013,061	+				+0.1
2,013,061	+				+0.5
2,013,061	+				+0.5
2,013,061	+				+1.0
2,013,061	+				+0.2
2,013,061	+				-0.6
2,013,061	+				+0.1
2,013,062	-				+0.3
2,013,062	-				-0.7
2,013,097	+				-3.2
2,013,097	+				-0.2
2,013,097	+				-0.8
2,013,097	+				-1.2
2,013,111	-				-3.3
2,013,111	-				-1.5
2,013,111	-				+2.0
2,013,162	+				-1.0
2,013,162	+				-0.3
2,013,163	-				+0.2
2,013,163	-				-2.7
2,013,195	+		PFLU_RS09080	0.10	-0.6
2,013,195	+		PFLU_RS09080	0.10	+0.4
2,013,196	-		PFLU_RS09080	0.11	+0.5
2,013,196	-		PFLU_RS09080	0.11	+0.3
2,013,196	-		PFLU_RS09080	0.11	-0.5
2,013,196	-		PFLU_RS09080	0.11	-0.4
2,013,196	-		PFLU_RS09080	0.11	+1.1
2,013,378	+		PFLU_RS09080	0.33	-0.3
2,013,379	-		PFLU_RS09080	0.33	+0.6
2,013,379	-		PFLU_RS09080	0.33	+0.6
2,013,461	+		PFLU_RS09080	0.44	+0.2
2,013,537	+		PFLU_RS09080	0.53	-1.2
2,013,537	+		PFLU_RS09080	0.53	-1.3
2,013,537	+		PFLU_RS09080	0.53	+0.3
2,013,538	-		PFLU_RS09080	0.53	+0.8
2,013,538	-		PFLU_RS09080	0.53	+0.3
2,013,591	+		PFLU_RS09080	0.60	-1.1
2,013,592	-		PFLU_RS09080	0.60	-1.8
2,013,592	-		PFLU_RS09080	0.60	+0.3
2,013,666	+		PFLU_RS09080	0.69	+1.3
2,013,666	+		PFLU_RS09080	0.69	+0.0
2,013,667	-		PFLU_RS09080	0.69	+0.3
2,013,667	-		PFLU_RS09080	0.69	+2.8
2,013,667	-		PFLU_RS09080	0.69	-0.3
2,013,667	-		PFLU_RS09080	0.69	+2.5
2,013,667	-		PFLU_RS09080	0.69	-0.0
2,013,684	-		PFLU_RS09080	0.71	-0.3
2,014,134	-		PFLU_RS09085	0.26	+2.1
2,014,148	+		PFLU_RS09085	0.28	-0.5
2,014,149	-		PFLU_RS09085	0.28	+0.8
2,014,149	-		PFLU_RS09085	0.28	-1.2
2,014,149	-		PFLU_RS09085	0.28	+0.9
2,014,154	+		PFLU_RS09085	0.28	+2.1
2,014,154	+		PFLU_RS09085	0.28	+0.4
2,014,154	+		PFLU_RS09085	0.28	-0.4
2,014,154	+		PFLU_RS09085	0.28	-0.3
2,014,154	+		PFLU_RS09085	0.28	+1.1
2,014,154	+		PFLU_RS09085	0.28	+0.0
2,014,155	-		PFLU_RS09085	0.29	-0.8
2,014,155	-		PFLU_RS09085	0.29	+0.2
2,014,155	-		PFLU_RS09085	0.29	-1.9
2,014,155	-		PFLU_RS09085	0.29	-0.5
2,014,155	-		PFLU_RS09085	0.29	-0.2
2,014,155	-		PFLU_RS09085	0.29	+0.8
2,014,155	-		PFLU_RS09085	0.29	+0.7
2,014,203	+		PFLU_RS09085	0.34	+0.3
2,014,203	+		PFLU_RS09085	0.34	+2.3
2,014,388	+		PFLU_RS09085	0.56	+1.1
2,014,388	+		PFLU_RS09085	0.56	+1.3
2,014,388	+		PFLU_RS09085	0.56	-0.2
2,014,388	+		PFLU_RS09085	0.56	+1.7
2,014,388	+		PFLU_RS09085	0.56	-1.1
2,014,388	+		PFLU_RS09085	0.56	+0.7
2,014,388	+		PFLU_RS09085	0.56	-1.2
2,014,388	+		PFLU_RS09085	0.56	+1.0
2,014,388	+		PFLU_RS09085	0.56	-0.8
2,014,389	-		PFLU_RS09085	0.56	-0.4
2,014,389	-		PFLU_RS09085	0.56	-1.1
2,014,389	-		PFLU_RS09085	0.56	+0.1
2,014,389	-		PFLU_RS09085	0.56	+2.5
2,014,389	-		PFLU_RS09085	0.56	-0.5
2,014,389	-		PFLU_RS09085	0.56	-2.2
2,014,389	-		PFLU_RS09085	0.56	-0.1
2,014,390	+		PFLU_RS09085	0.56	+1.8
2,014,390	+		PFLU_RS09085	0.56	+0.3
2,014,390	+		PFLU_RS09085	0.56	-0.5
2,014,390	+		PFLU_RS09085	0.56	+1.9
2,014,390	+		PFLU_RS09085	0.56	+0.1
2,014,391	-		PFLU_RS09085	0.56	-0.5
2,014,391	-		PFLU_RS09085	0.56	+1.4
2,014,500	-		PFLU_RS09085	0.69	-0.7
2,014,656	+		PFLU_RS09085	0.87	-0.3
2,014,656	+		PFLU_RS09085	0.87	-1.4
2,014,657	-		PFLU_RS09085	0.87	-0.6
2,014,657	-		PFLU_RS09085	0.87	-1.5
2,014,664	-		PFLU_RS09085	0.88	+0.1
2,014,695	+				+0.4
2,014,695	+				-0.4
2,014,695	+				-1.7
2,014,695	+				-3.1
2,014,695	+				-0.5
2,014,695	+				-0.1
2,014,695	+				+0.5
2,014,696	-				+0.3
2,014,696	-				+0.3
2,014,696	-				-0.0
2,014,696	-				+0.1
2,014,696	-				-1.4
2,014,696	-				-0.7
2,014,875	+				+0.7
2,014,876	-				+0.8
2,014,879	+				-1.0
2,014,879	+				+0.0
2,014,879	+				+1.1
2,014,879	+				-1.0
2,014,879	+				-1.1
2,014,879	+				-0.0
2,014,879	+				-0.2
2,014,879	+				+0.1
2,014,879	+				+0.6
2,014,880	-				-0.6
2,014,880	-				+0.6
2,014,880	-				-1.7
2,014,880	-				+1.0
2,014,880	-				+0.6
2,014,880	-				+0.4
2,014,880	-				-1.3
2,014,880	-				+0.1
2,014,880	-				+0.1
2,014,880	-				-2.6
2,014,888	+				+0.2
2,014,888	+				-0.3
2,014,888	+				-0.3
2,014,889	-				-0.3
2,014,889	-				+0.2
2,014,889	-				-0.3
2,014,889	-				-0.4