Strain Fitness in Pseudomonas sp. S08-1 around OH686_03350

Experiment: D-Glucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOH686_03340 and OH686_03345 overlap by 4 nucleotidesOH686_03345 and OH686_03350 are separated by 55 nucleotidesOH686_03350 and OH686_03355 are separated by 204 nucleotidesOH686_03355 and OH686_03360 are separated by 209 nucleotides OH686_03340: OH686_03340 - Ribosyl nicotinamide transporter, PnuC-like, at 695,258 to 695,821 _03340 OH686_03345: OH686_03345 - Ribosylnicotinamide kinase , at 695,818 to 696,339 _03345 OH686_03350: OH686_03350 - hypothetical protein, at 696,395 to 697,048 _03350 OH686_03355: OH686_03355 - Lead, cadmium, zinc and mercury transporting ATPase / Copper-translocating P-type ATPase , at 697,253 to 697,798 _03355 OH686_03360: OH686_03360 - hypothetical protein, at 698,008 to 698,340 _03360 Position (kb) 696 697 698Strain fitness (log2 ratio) -2 -1 0 1 2at 695.396 kb on + strand, within OH686_03340at 695.396 kb on + strand, within OH686_03340at 695.397 kb on - strand, within OH686_03340at 695.397 kb on - strand, within OH686_03340at 695.406 kb on + strand, within OH686_03340at 695.421 kb on + strand, within OH686_03340at 695.441 kb on + strand, within OH686_03340at 695.442 kb on - strand, within OH686_03340at 695.442 kb on - strand, within OH686_03340at 695.442 kb on - strand, within OH686_03340at 695.442 kb on - strand, within OH686_03340at 695.442 kb on - strand, within OH686_03340at 695.442 kb on - strand, within OH686_03340at 695.442 kb on - strand, within OH686_03340at 695.442 kb on - strand, within OH686_03340at 695.442 kb on - strand, within OH686_03340at 695.594 kb on + strand, within OH686_03340at 695.594 kb on + strand, within OH686_03340at 695.595 kb on - strand, within OH686_03340at 695.686 kb on - strand, within OH686_03340at 695.686 kb on - strand, within OH686_03340at 695.702 kb on + strand, within OH686_03340at 695.702 kb on + strand, within OH686_03340at 695.702 kb on + strand, within OH686_03340at 695.702 kb on + strand, within OH686_03340at 695.702 kb on + strand, within OH686_03340at 695.702 kb on + strand, within OH686_03340at 695.702 kb on + strand, within OH686_03340at 695.702 kb on + strand, within OH686_03340at 695.702 kb on + strand, within OH686_03340at 695.702 kb on + strand, within OH686_03340at 695.702 kb on + strand, within OH686_03340at 695.702 kb on + strand, within OH686_03340at 695.702 kb on + strand, within OH686_03340at 695.703 kb on - strand, within OH686_03340at 695.703 kb on - strand, within OH686_03340at 695.703 kb on - strand, within OH686_03340at 695.703 kb on - strand, within OH686_03340at 695.703 kb on - strand, within OH686_03340at 695.703 kb on - strand, within OH686_03340at 695.703 kb on - strand, within OH686_03340at 695.703 kb on - strand, within OH686_03340at 695.729 kb on + strand, within OH686_03340at 695.729 kb on + strand, within OH686_03340at 695.729 kb on + strand, within OH686_03340at 695.730 kb on - strand, within OH686_03340at 695.750 kb on + strand, within OH686_03340at 695.757 kb on + strand, within OH686_03340at 695.758 kb on - strand, within OH686_03340at 695.758 kb on - strand, within OH686_03340at 695.758 kb on - strand, within OH686_03340at 695.758 kb on - strand, within OH686_03340at 695.914 kb on + strand, within OH686_03345at 695.914 kb on + strand, within OH686_03345at 695.914 kb on + strand, within OH686_03345at 695.915 kb on - strand, within OH686_03345at 695.915 kb on - strand, within OH686_03345at 695.915 kb on - strand, within OH686_03345at 695.915 kb on - strand, within OH686_03345at 695.950 kb on - strand, within OH686_03345at 695.950 kb on - strand, within OH686_03345at 696.060 kb on + strand, within OH686_03345at 696.060 kb on + strand, within OH686_03345at 696.061 kb on - strand, within OH686_03345at 696.131 kb on - strand, within OH686_03345at 696.131 kb on - strand, within OH686_03345at 696.131 kb on - strand, within OH686_03345at 696.131 kb on - strand, within OH686_03345at 696.215 kb on + strand, within OH686_03345at 696.215 kb on + strand, within OH686_03345at 696.215 kb on + strand, within OH686_03345at 696.216 kb on - strand, within OH686_03345at 696.216 kb on - strand, within OH686_03345at 696.216 kb on - strand, within OH686_03345at 696.216 kb on - strand, within OH686_03345at 696.320 kb on + strandat 696.320 kb on + strandat 696.320 kb on + strandat 696.321 kb on - strandat 696.321 kb on - strandat 696.321 kb on - strandat 696.321 kb on - strandat 696.359 kb on + strandat 696.359 kb on + strandat 696.360 kb on - strandat 696.360 kb on - strandat 696.360 kb on - strandat 696.410 kb on + strandat 696.410 kb on + strandat 696.410 kb on + strandat 696.410 kb on + strandat 696.410 kb on + strandat 696.410 kb on + strandat 696.410 kb on + strandat 696.410 kb on + strandat 696.411 kb on - strandat 696.411 kb on - strandat 696.411 kb on - strandat 696.411 kb on - strandat 696.411 kb on - strandat 696.411 kb on - strandat 696.411 kb on - strandat 696.411 kb on - strandat 696.411 kb on - strandat 696.471 kb on - strand, within OH686_03350at 696.686 kb on + strand, within OH686_03350at 696.686 kb on + strand, within OH686_03350at 696.686 kb on + strand, within OH686_03350at 696.686 kb on + strand, within OH686_03350at 696.686 kb on + strand, within OH686_03350at 696.687 kb on - strand, within OH686_03350at 696.692 kb on + strand, within OH686_03350at 696.692 kb on + strand, within OH686_03350at 696.693 kb on - strand, within OH686_03350at 696.716 kb on + strand, within OH686_03350at 696.716 kb on + strand, within OH686_03350at 696.716 kb on + strand, within OH686_03350at 696.717 kb on - strand, within OH686_03350at 696.717 kb on - strand, within OH686_03350at 696.755 kb on + strand, within OH686_03350at 696.755 kb on + strand, within OH686_03350at 696.756 kb on - strand, within OH686_03350at 696.756 kb on - strand, within OH686_03350at 696.756 kb on - strand, within OH686_03350at 696.882 kb on - strand, within OH686_03350at 696.995 kb on + strandat 696.996 kb on - strandat 696.996 kb on - strandat 696.996 kb on - strandat 696.996 kb on - strandat 696.996 kb on - strandat 697.021 kb on + strandat 697.021 kb on + strandat 697.022 kb on - strandat 697.058 kb on + strandat 697.058 kb on + strandat 697.095 kb on - strandat 697.095 kb on - strandat 697.114 kb on + strandat 697.114 kb on + strandat 697.114 kb on + strandat 697.115 kb on - strandat 697.115 kb on - strandat 697.115 kb on - strandat 697.115 kb on - strandat 697.115 kb on - strandat 697.124 kb on - strandat 697.178 kb on + strandat 697.178 kb on + strandat 697.179 kb on - strandat 697.189 kb on + strandat 697.189 kb on + strandat 697.189 kb on + strandat 697.189 kb on + strandat 697.189 kb on + strandat 697.190 kb on - strandat 697.190 kb on - strandat 697.190 kb on - strandat 697.190 kb on - strandat 697.190 kb on - strandat 697.190 kb on - strandat 697.190 kb on - strandat 697.190 kb on - strandat 697.254 kb on + strandat 697.254 kb on + strandat 697.255 kb on - strandat 697.255 kb on - strandat 697.337 kb on + strand, within OH686_03355at 697.338 kb on - strand, within OH686_03355at 697.338 kb on - strand, within OH686_03355at 697.405 kb on - strand, within OH686_03355at 697.405 kb on - strand, within OH686_03355at 697.474 kb on + strand, within OH686_03355at 697.585 kb on + strand, within OH686_03355at 697.586 kb on - strand, within OH686_03355at 697.586 kb on - strand, within OH686_03355at 697.586 kb on - strand, within OH686_03355at 697.586 kb on - strand, within OH686_03355at 697.708 kb on + strand, within OH686_03355at 697.708 kb on + strand, within OH686_03355at 697.709 kb on - strand, within OH686_03355at 697.709 kb on - strand, within OH686_03355at 697.709 kb on - strand, within OH686_03355at 697.709 kb on - strand, within OH686_03355at 697.709 kb on - strand, within OH686_03355at 697.709 kb on - strand, within OH686_03355at 697.709 kb on - strand, within OH686_03355at 697.804 kb on + strandat 697.804 kb on + strandat 697.805 kb on - strandat 697.812 kb on + strandat 697.813 kb on - strandat 697.813 kb on - strandat 697.969 kb on + strandat 697.969 kb on + strandat 697.970 kb on - strandat 697.970 kb on - strandat 697.970 kb on - strandat 698.011 kb on + strandat 698.011 kb on + strandat 698.011 kb on + strandat 698.011 kb on + strandat 698.011 kb on + strandat 698.011 kb on + strandat 698.011 kb on + strandat 698.011 kb on + strandat 698.011 kb on + strandat 698.011 kb on + strandat 698.012 kb on - strandat 698.012 kb on - strandat 698.012 kb on - strandat 698.012 kb on - strandat 698.012 kb on - strandat 698.012 kb on - strandat 698.012 kb on - strandat 698.012 kb on - strandat 698.012 kb on - strandat 698.012 kb on - strandat 698.012 kb on - strandat 698.012 kb on - strandat 698.012 kb on - strandat 698.012 kb on - strandat 698.012 kb on - strandat 698.012 kb on - strandat 698.012 kb on - strandat 698.012 kb on - strandat 698.030 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C)
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695,396 + OH686_03340 0.24 -0.1
695,396 + OH686_03340 0.24 +0.4
695,397 - OH686_03340 0.25 -1.2
695,397 - OH686_03340 0.25 +1.1
695,406 + OH686_03340 0.26 +0.5
695,421 + OH686_03340 0.29 +1.0
695,441 + OH686_03340 0.32 +0.9
695,442 - OH686_03340 0.33 -0.3
695,442 - OH686_03340 0.33 -0.5
695,442 - OH686_03340 0.33 +0.5
695,442 - OH686_03340 0.33 -1.4
695,442 - OH686_03340 0.33 -0.7
695,442 - OH686_03340 0.33 +0.7
695,442 - OH686_03340 0.33 -0.1
695,442 - OH686_03340 0.33 -0.7
695,442 - OH686_03340 0.33 +0.3
695,594 + OH686_03340 0.60 -0.3
695,594 + OH686_03340 0.60 -0.1
695,595 - OH686_03340 0.60 -0.3
695,686 - OH686_03340 0.76 -0.2
695,686 - OH686_03340 0.76 -1.0
695,702 + OH686_03340 0.79 -0.3
695,702 + OH686_03340 0.79 +0.1
695,702 + OH686_03340 0.79 -1.2
695,702 + OH686_03340 0.79 +0.6
695,702 + OH686_03340 0.79 -0.5
695,702 + OH686_03340 0.79 +1.0
695,702 + OH686_03340 0.79 -1.3
695,702 + OH686_03340 0.79 +1.9
695,702 + OH686_03340 0.79 +0.9
695,702 + OH686_03340 0.79 -0.2
695,702 + OH686_03340 0.79 +0.9
695,702 + OH686_03340 0.79 -0.1
695,702 + OH686_03340 0.79 +0.8
695,703 - OH686_03340 0.79 -0.5
695,703 - OH686_03340 0.79 -0.4
695,703 - OH686_03340 0.79 +0.5
695,703 - OH686_03340 0.79 +0.0
695,703 - OH686_03340 0.79 -0.1
695,703 - OH686_03340 0.79 -0.3
695,703 - OH686_03340 0.79 -0.1
695,703 - OH686_03340 0.79 -0.4
695,729 + OH686_03340 0.84 -1.2
695,729 + OH686_03340 0.84 -2.1
695,729 + OH686_03340 0.84 -1.1
695,730 - OH686_03340 0.84 -1.8
695,750 + OH686_03340 0.87 -0.1
695,757 + OH686_03340 0.88 -0.4
695,758 - OH686_03340 0.89 +0.7
695,758 - OH686_03340 0.89 -0.2
695,758 - OH686_03340 0.89 -1.1
695,758 - OH686_03340 0.89 -0.5
695,914 + OH686_03345 0.18 -0.0
695,914 + OH686_03345 0.18 +0.1
695,914 + OH686_03345 0.18 +0.1
695,915 - OH686_03345 0.19 -0.8
695,915 - OH686_03345 0.19 +0.3
695,915 - OH686_03345 0.19 +0.5
695,915 - OH686_03345 0.19 +0.0
695,950 - OH686_03345 0.25 -1.7
695,950 - OH686_03345 0.25 -0.4
696,060 + OH686_03345 0.46 -0.4
696,060 + OH686_03345 0.46 -0.1
696,061 - OH686_03345 0.47 -0.3
696,131 - OH686_03345 0.60 +0.2
696,131 - OH686_03345 0.60 -0.2
696,131 - OH686_03345 0.60 +0.0
696,131 - OH686_03345 0.60 +0.8
696,215 + OH686_03345 0.76 -1.1
696,215 + OH686_03345 0.76 +0.3
696,215 + OH686_03345 0.76 -0.0
696,216 - OH686_03345 0.76 -1.2
696,216 - OH686_03345 0.76 -0.0
696,216 - OH686_03345 0.76 -0.4
696,216 - OH686_03345 0.76 -0.4
696,320 + +0.5
696,320 + -0.2
696,320 + -0.6
696,321 - -0.1
696,321 - -0.3
696,321 - +0.9
696,321 - +0.5
696,359 + -0.2
696,359 + +0.7
696,360 - -0.6
696,360 - -0.5
696,360 - +0.3
696,410 + -0.2
696,410 + -0.0
696,410 + +0.1
696,410 + +0.2
696,410 + +1.4
696,410 + -0.5
696,410 + +0.1
696,410 + +0.3
696,411 - -0.8
696,411 - -0.0
696,411 - -1.2
696,411 - -0.1
696,411 - +0.0
696,411 - -1.0
696,411 - -0.9
696,411 - -0.0
696,411 - -0.5
696,471 - OH686_03350 0.12 -0.1
696,686 + OH686_03350 0.44 +1.3
696,686 + OH686_03350 0.44 +0.3
696,686 + OH686_03350 0.44 -0.3
696,686 + OH686_03350 0.44 -1.3
696,686 + OH686_03350 0.44 -0.4
696,687 - OH686_03350 0.45 +0.4
696,692 + OH686_03350 0.45 +1.3
696,692 + OH686_03350 0.45 +0.5
696,693 - OH686_03350 0.46 +0.1
696,716 + OH686_03350 0.49 +1.3
696,716 + OH686_03350 0.49 -0.6
696,716 + OH686_03350 0.49 -0.6
696,717 - OH686_03350 0.49 +0.3
696,717 - OH686_03350 0.49 -0.7
696,755 + OH686_03350 0.55 +0.1
696,755 + OH686_03350 0.55 -0.2
696,756 - OH686_03350 0.55 -1.1
696,756 - OH686_03350 0.55 +0.3
696,756 - OH686_03350 0.55 -0.4
696,882 - OH686_03350 0.74 -0.4
696,995 + -1.0
696,996 - +0.5
696,996 - +0.1
696,996 - -0.4
696,996 - +0.3
696,996 - -0.1
697,021 + +0.4
697,021 + -0.9
697,022 - -0.1
697,058 + +0.2
697,058 + -0.5
697,095 - -0.7
697,095 - -0.4
697,114 + +0.1
697,114 + +0.5
697,114 + -1.4
697,115 - -0.3
697,115 - -0.8
697,115 - +0.2
697,115 - -0.6
697,115 - -0.3
697,124 - -0.9
697,178 + +0.4
697,178 + -0.8
697,179 - -0.7
697,189 + +0.2
697,189 + -0.4
697,189 + +0.5
697,189 + -0.7
697,189 + +0.3
697,190 - +0.8
697,190 - -0.6
697,190 - +0.9
697,190 - -0.3
697,190 - -0.9
697,190 - -1.9
697,190 - -0.1
697,190 - -0.0
697,254 + -0.5
697,254 + +0.4
697,255 - +0.9
697,255 - -1.0
697,337 + OH686_03355 0.15 -1.1
697,338 - OH686_03355 0.16 +0.3
697,338 - OH686_03355 0.16 +0.2
697,405 - OH686_03355 0.28 +0.6
697,405 - OH686_03355 0.28 +0.4
697,474 + OH686_03355 0.40 +0.1
697,585 + OH686_03355 0.61 -0.2
697,586 - OH686_03355 0.61 -0.2
697,586 - OH686_03355 0.61 +0.1
697,586 - OH686_03355 0.61 -1.0
697,586 - OH686_03355 0.61 -0.9
697,708 + OH686_03355 0.83 +1.3
697,708 + OH686_03355 0.83 +0.6
697,709 - OH686_03355 0.84 +0.4
697,709 - OH686_03355 0.84 +0.9
697,709 - OH686_03355 0.84 -0.1
697,709 - OH686_03355 0.84 -0.4
697,709 - OH686_03355 0.84 -0.1
697,709 - OH686_03355 0.84 -0.5
697,709 - OH686_03355 0.84 +0.6
697,804 + +0.6
697,804 + +0.2
697,805 - +0.1
697,812 + +0.5
697,813 - -0.1
697,813 - -0.2
697,969 + +0.3
697,969 + +0.2
697,970 - -1.2
697,970 - +0.4
697,970 - +0.1
698,011 + -0.3
698,011 + -0.0
698,011 + +0.3
698,011 + +0.6
698,011 + +0.1
698,011 + +0.2
698,011 + +0.8
698,011 + -0.0
698,011 + +0.3
698,011 + -0.6
698,012 - +1.2
698,012 - +1.7
698,012 - -0.2
698,012 - +0.2
698,012 - +0.9
698,012 - -0.5
698,012 - -1.8
698,012 - +0.3
698,012 - +1.2
698,012 - -0.4
698,012 - -0.4
698,012 - -0.4
698,012 - -0.1
698,012 - -0.7
698,012 - -0.5
698,012 - -0.7
698,012 - -0.4
698,012 - -0.2
698,030 + -0.1

Or see this region's nucleotide sequence