Experiment: m.b. Thallium(I) acetate 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4304 and Echvi_4305 are separated by 66 nucleotides Echvi_4305 and Echvi_4306 are separated by 239 nucleotides Echvi_4306 and Echvi_4307 are separated by 331 nucleotides Echvi_4307 and Echvi_4308 overlap by 11 nucleotides Echvi_4308 and Echvi_4309 are separated by 0 nucleotides
Echvi_4304: Echvi_4304 - Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily), at 5,143,705 to 5,144,517
_4304
Echvi_4305: Echvi_4305 - Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase., at 5,144,584 to 5,144,877
_4305
Echvi_4306: Echvi_4306 - hypothetical protein, at 5,145,117 to 5,145,245
_4306
Echvi_4307: Echvi_4307 - Uncharacterized protein conserved in bacteria, at 5,145,577 to 5,145,977
_4307
Echvi_4308: Echvi_4308 - hypothetical protein, at 5,145,967 to 5,146,152
_4308
Echvi_4309: Echvi_4309 - hypothetical protein, at 5,146,153 to 5,146,347
_4309
Position (kb)
5145
5146 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 5144.151 kb on + strand, within Echvi_4304 at 5144.151 kb on + strand, within Echvi_4304 at 5144.155 kb on + strand, within Echvi_4304 at 5144.173 kb on + strand, within Echvi_4304 at 5144.173 kb on + strand, within Echvi_4304 at 5144.173 kb on + strand, within Echvi_4304 at 5144.173 kb on + strand, within Echvi_4304 at 5144.173 kb on + strand, within Echvi_4304 at 5144.174 kb on - strand, within Echvi_4304 at 5144.174 kb on - strand, within Echvi_4304 at 5144.180 kb on - strand, within Echvi_4304 at 5144.180 kb on - strand, within Echvi_4304 at 5144.251 kb on + strand, within Echvi_4304 at 5144.251 kb on + strand, within Echvi_4304 at 5144.251 kb on + strand, within Echvi_4304 at 5144.252 kb on - strand, within Echvi_4304 at 5144.258 kb on - strand, within Echvi_4304 at 5144.258 kb on - strand, within Echvi_4304 at 5144.312 kb on - strand, within Echvi_4304 at 5144.328 kb on + strand, within Echvi_4304 at 5144.328 kb on + strand, within Echvi_4304 at 5144.430 kb on + strand, within Echvi_4304 at 5144.431 kb on - strand, within Echvi_4304 at 5144.431 kb on - strand, within Echvi_4304 at 5144.451 kb on + strand at 5144.455 kb on + strand at 5144.482 kb on - strand at 5144.487 kb on - strand at 5144.487 kb on - strand at 5144.490 kb on + strand at 5144.601 kb on + strand at 5144.601 kb on + strand at 5144.601 kb on + strand at 5144.601 kb on + strand at 5144.601 kb on + strand at 5144.602 kb on - strand at 5144.602 kb on - strand at 5144.602 kb on - strand at 5144.605 kb on + strand at 5144.605 kb on + strand at 5144.606 kb on - strand at 5144.606 kb on - strand at 5144.606 kb on - strand at 5144.606 kb on - strand at 5144.606 kb on - strand at 5144.606 kb on - strand at 5144.609 kb on + strand at 5144.609 kb on + strand at 5144.610 kb on - strand at 5144.710 kb on + strand, within Echvi_4305 at 5144.724 kb on - strand, within Echvi_4305 at 5144.724 kb on - strand, within Echvi_4305 at 5144.724 kb on - strand, within Echvi_4305 at 5144.725 kb on + strand, within Echvi_4305 at 5144.813 kb on + strand, within Echvi_4305 at 5144.905 kb on - strand at 5144.950 kb on - strand at 5144.999 kb on + strand at 5145.000 kb on - strand at 5145.001 kb on + strand at 5145.136 kb on - strand, within Echvi_4306 at 5145.155 kb on - strand, within Echvi_4306 at 5145.155 kb on - strand, within Echvi_4306 at 5145.294 kb on - strand at 5145.294 kb on - strand at 5145.332 kb on + strand at 5145.378 kb on - strand at 5145.394 kb on + strand at 5145.399 kb on - strand at 5145.418 kb on + strand at 5145.418 kb on + strand at 5145.418 kb on + strand at 5145.419 kb on - strand at 5145.419 kb on - strand at 5145.436 kb on - strand at 5145.463 kb on + strand at 5145.465 kb on + strand at 5145.482 kb on + strand at 5145.499 kb on + strand at 5145.499 kb on + strand at 5145.499 kb on + strand at 5145.500 kb on - strand at 5145.560 kb on + strand at 5145.560 kb on + strand at 5145.560 kb on + strand at 5145.561 kb on - strand at 5145.695 kb on + strand, within Echvi_4307 at 5145.696 kb on - strand, within Echvi_4307 at 5145.696 kb on - strand, within Echvi_4307 at 5145.698 kb on - strand, within Echvi_4307 at 5145.698 kb on - strand, within Echvi_4307 at 5145.701 kb on + strand, within Echvi_4307 at 5145.784 kb on - strand, within Echvi_4307 at 5145.805 kb on - strand, within Echvi_4307 at 5145.821 kb on + strand, within Echvi_4307 at 5145.835 kb on + strand, within Echvi_4307 at 5145.836 kb on - strand, within Echvi_4307 at 5145.889 kb on - strand, within Echvi_4307 at 5145.966 kb on + strand at 5145.966 kb on + strand at 5145.966 kb on + strand at 5145.967 kb on - strand at 5145.967 kb on - strand at 5145.967 kb on - strand at 5145.967 kb on - strand at 5145.975 kb on + strand at 5145.976 kb on - strand at 5145.987 kb on + strand, within Echvi_4308 at 5145.987 kb on + strand, within Echvi_4308 at 5146.075 kb on + strand, within Echvi_4308 at 5146.075 kb on + strand, within Echvi_4308 at 5146.141 kb on - strand at 5146.150 kb on + strand at 5146.151 kb on - strand at 5146.151 kb on - strand at 5146.151 kb on - strand at 5146.154 kb on + strand at 5146.154 kb on + strand at 5146.172 kb on + strand at 5146.172 kb on + strand at 5146.173 kb on - strand, within Echvi_4309 at 5146.173 kb on - strand, within Echvi_4309
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.025 mg/ml remove 5,144,151 + Echvi_4304 0.55 +0.2 5,144,151 + Echvi_4304 0.55 -0.4 5,144,155 + Echvi_4304 0.55 -0.2 5,144,173 + Echvi_4304 0.58 -0.1 5,144,173 + Echvi_4304 0.58 +1.3 5,144,173 + Echvi_4304 0.58 +0.1 5,144,173 + Echvi_4304 0.58 +0.5 5,144,173 + Echvi_4304 0.58 +1.0 5,144,174 - Echvi_4304 0.58 -0.3 5,144,174 - Echvi_4304 0.58 -0.4 5,144,180 - Echvi_4304 0.58 -0.4 5,144,180 - Echvi_4304 0.58 -0.6 5,144,251 + Echvi_4304 0.67 +0.4 5,144,251 + Echvi_4304 0.67 +0.9 5,144,251 + Echvi_4304 0.67 +0.8 5,144,252 - Echvi_4304 0.67 -1.5 5,144,258 - Echvi_4304 0.68 -0.7 5,144,258 - Echvi_4304 0.68 -0.4 5,144,312 - Echvi_4304 0.75 +0.2 5,144,328 + Echvi_4304 0.77 +1.4 5,144,328 + Echvi_4304 0.77 +0.5 5,144,430 + Echvi_4304 0.89 +0.2 5,144,431 - Echvi_4304 0.89 +0.1 5,144,431 - Echvi_4304 0.89 +0.8 5,144,451 + +0.2 5,144,455 + +0.1 5,144,482 - -0.1 5,144,487 - -1.8 5,144,487 - -0.5 5,144,490 + -0.8 5,144,601 + -0.1 5,144,601 + -0.7 5,144,601 + -0.7 5,144,601 + -0.1 5,144,601 + +0.2 5,144,602 - +0.6 5,144,602 - +0.3 5,144,602 - -2.5 5,144,605 + +0.9 5,144,605 + +0.8 5,144,606 - -0.9 5,144,606 - -0.2 5,144,606 - -1.9 5,144,606 - -1.7 5,144,606 - -0.3 5,144,606 - -0.9 5,144,609 + +0.2 5,144,609 + +0.1 5,144,610 - -0.4 5,144,710 + Echvi_4305 0.43 +0.1 5,144,724 - Echvi_4305 0.48 +1.0 5,144,724 - Echvi_4305 0.48 -0.3 5,144,724 - Echvi_4305 0.48 -1.2 5,144,725 + Echvi_4305 0.48 -0.7 5,144,813 + Echvi_4305 0.78 +0.8 5,144,905 - -1.7 5,144,950 - -0.2 5,144,999 + -0.6 5,145,000 - +0.2 5,145,001 + +0.4 5,145,136 - Echvi_4306 0.15 -1.2 5,145,155 - Echvi_4306 0.29 -0.2 5,145,155 - Echvi_4306 0.29 -0.4 5,145,294 - +0.3 5,145,294 - -1.5 5,145,332 + -0.3 5,145,378 - -0.4 5,145,394 + +0.2 5,145,399 - -0.4 5,145,418 + -1.2 5,145,418 + -0.1 5,145,418 + +0.3 5,145,419 - -1.3 5,145,419 - +1.1 5,145,436 - +1.1 5,145,463 + -0.7 5,145,465 + +0.3 5,145,482 + -0.7 5,145,499 + -1.8 5,145,499 + -0.4 5,145,499 + +0.1 5,145,500 - +0.2 5,145,560 + -0.2 5,145,560 + -2.7 5,145,560 + -2.0 5,145,561 - +0.3 5,145,695 + Echvi_4307 0.29 +0.7 5,145,696 - Echvi_4307 0.30 +0.5 5,145,696 - Echvi_4307 0.30 +0.4 5,145,698 - Echvi_4307 0.30 +0.4 5,145,698 - Echvi_4307 0.30 +1.1 5,145,701 + Echvi_4307 0.31 +1.4 5,145,784 - Echvi_4307 0.52 -0.4 5,145,805 - Echvi_4307 0.57 -1.0 5,145,821 + Echvi_4307 0.61 -0.1 5,145,835 + Echvi_4307 0.64 -0.3 5,145,836 - Echvi_4307 0.65 +1.8 5,145,889 - Echvi_4307 0.78 +1.0 5,145,966 + +0.6 5,145,966 + -0.6 5,145,966 + -0.3 5,145,967 - -3.0 5,145,967 - -0.5 5,145,967 - -0.1 5,145,967 - -0.9 5,145,975 + +0.9 5,145,976 - +0.0 5,145,987 + Echvi_4308 0.11 +1.9 5,145,987 + Echvi_4308 0.11 -0.1 5,146,075 + Echvi_4308 0.58 -0.3 5,146,075 + Echvi_4308 0.58 +0.4 5,146,141 - +0.6 5,146,150 + -0.2 5,146,151 - +1.0 5,146,151 - -0.5 5,146,151 - +0.3 5,146,154 + +0.4 5,146,154 + -0.1 5,146,172 + -0.8 5,146,172 + -0.2 5,146,173 - Echvi_4309 0.10 +0.3 5,146,173 - Echvi_4309 0.10 -0.8
Or see this region's nucleotide sequence