Experiment: m.b. Thallium(I) acetate 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4284 and Echvi_4285 are separated by 13 nucleotides Echvi_4285 and Echvi_4286 overlap by 2720 nucleotides Echvi_4286 and Echvi_4287 overlap by 1 nucleotides Echvi_4287 and Echvi_4288 are separated by 170 nucleotides Echvi_4288 and Echvi_4289 are separated by 389 nucleotides Echvi_4289 and Echvi_4290 are separated by 121 nucleotides
Echvi_4284: Echvi_4284 - Periplasmic protease, at 5,129,056 to 5,130,444
_4284
Echvi_4285: Echvi_4285 - hypothetical protein, at 5,130,458 to 5,133,657
_4285
Echvi_4286: Echvi_4286 - hypothetical protein, at 5,130,938 to 5,131,225
_4286
Echvi_4287: Echvi_4287 - Transposase and inactivated derivatives, at 5,131,225 to 5,131,566
_4287
Echvi_4288: Echvi_4288 - Transposase and inactivated derivatives, at 5,131,737 to 5,133,290
_4288
Echvi_4289: Echvi_4289 - cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases, at 5,133,680 to 5,134,252
_4289
Echvi_4290: Echvi_4290 - Activator of Hsp90 ATPase homolog 1-like protein., at 5,134,374 to 5,134,778
_4290
Position (kb) 5130
5131
5132
5133
5134 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5129.466 kb on + strand, within Echvi_4284 at 5129.466 kb on + strand, within Echvi_4284 at 5129.473 kb on + strand, within Echvi_4284 at 5129.556 kb on - strand, within Echvi_4284 at 5129.562 kb on + strand, within Echvi_4284 at 5129.562 kb on + strand, within Echvi_4284 at 5129.563 kb on - strand, within Echvi_4284 at 5129.599 kb on - strand, within Echvi_4284 at 5129.606 kb on - strand, within Echvi_4284 at 5129.608 kb on + strand, within Echvi_4284 at 5129.611 kb on + strand, within Echvi_4284 at 5129.656 kb on + strand, within Echvi_4284 at 5129.707 kb on + strand, within Echvi_4284 at 5129.707 kb on + strand, within Echvi_4284 at 5129.708 kb on - strand, within Echvi_4284 at 5129.708 kb on - strand, within Echvi_4284 at 5129.728 kb on + strand, within Echvi_4284 at 5129.733 kb on - strand, within Echvi_4284 at 5129.759 kb on - strand, within Echvi_4284 at 5129.801 kb on + strand, within Echvi_4284 at 5129.803 kb on + strand, within Echvi_4284 at 5129.803 kb on + strand, within Echvi_4284 at 5129.803 kb on + strand, within Echvi_4284 at 5129.804 kb on - strand, within Echvi_4284 at 5129.826 kb on + strand, within Echvi_4284 at 5129.827 kb on - strand, within Echvi_4284 at 5129.881 kb on - strand, within Echvi_4284 at 5129.939 kb on + strand, within Echvi_4284 at 5129.939 kb on + strand, within Echvi_4284 at 5129.951 kb on - strand, within Echvi_4284 at 5130.014 kb on + strand, within Echvi_4284 at 5130.015 kb on - strand, within Echvi_4284 at 5130.015 kb on - strand, within Echvi_4284 at 5130.015 kb on - strand, within Echvi_4284 at 5130.023 kb on - strand at 5130.023 kb on - strand, within Echvi_4284 at 5130.023 kb on - strand, within Echvi_4284 at 5130.037 kb on - strand, within Echvi_4284 at 5130.051 kb on + strand at 5130.052 kb on - strand, within Echvi_4284 at 5130.052 kb on - strand, within Echvi_4284 at 5130.052 kb on - strand, within Echvi_4284 at 5130.060 kb on + strand, within Echvi_4284 at 5130.060 kb on + strand, within Echvi_4284 at 5130.060 kb on + strand, within Echvi_4284 at 5130.061 kb on - strand, within Echvi_4284 at 5130.067 kb on + strand, within Echvi_4284 at 5130.068 kb on - strand, within Echvi_4284 at 5130.111 kb on - strand, within Echvi_4284 at 5130.111 kb on - strand, within Echvi_4284 at 5130.111 kb on - strand, within Echvi_4284 at 5130.112 kb on + strand, within Echvi_4284 at 5130.112 kb on + strand, within Echvi_4284 at 5130.112 kb on + strand, within Echvi_4284 at 5130.113 kb on - strand, within Echvi_4284 at 5130.113 kb on - strand, within Echvi_4284 at 5130.125 kb on - strand, within Echvi_4284 at 5130.149 kb on - strand, within Echvi_4284 at 5130.157 kb on + strand, within Echvi_4284 at 5130.182 kb on - strand, within Echvi_4284 at 5130.182 kb on - strand, within Echvi_4284 at 5130.187 kb on + strand, within Echvi_4284 at 5130.187 kb on + strand, within Echvi_4284 at 5130.222 kb on + strand, within Echvi_4284 at 5130.222 kb on + strand, within Echvi_4284 at 5130.225 kb on + strand, within Echvi_4284 at 5130.226 kb on - strand, within Echvi_4284 at 5130.232 kb on - strand, within Echvi_4284 at 5130.253 kb on + strand, within Echvi_4284 at 5130.292 kb on - strand, within Echvi_4284 at 5130.316 kb on - strand at 5130.323 kb on + strand at 5130.324 kb on - strand at 5130.349 kb on - strand at 5130.367 kb on - strand at 5130.368 kb on + strand at 5130.368 kb on + strand at 5130.368 kb on + strand at 5130.369 kb on - strand at 5130.409 kb on + strand at 5130.449 kb on - strand at 5130.451 kb on - strand at 5130.451 kb on - strand at 5130.456 kb on - strand at 5130.459 kb on + strand at 5130.460 kb on - strand at 5130.531 kb on - strand at 5130.536 kb on + strand at 5130.536 kb on + strand at 5130.536 kb on + strand at 5130.536 kb on + strand at 5130.536 kb on + strand at 5130.573 kb on + strand at 5130.577 kb on + strand at 5130.577 kb on + strand at 5130.578 kb on - strand at 5130.583 kb on + strand at 5130.587 kb on - strand at 5130.594 kb on - strand at 5130.596 kb on - strand at 5130.608 kb on - strand at 5130.623 kb on + strand at 5130.650 kb on - strand at 5130.666 kb on - strand at 5130.728 kb on + strand at 5130.729 kb on - strand at 5130.735 kb on - strand at 5130.779 kb on + strand, within Echvi_4285 at 5130.788 kb on + strand, within Echvi_4285 at 5130.789 kb on - strand, within Echvi_4285 at 5130.824 kb on + strand, within Echvi_4285 at 5130.828 kb on - strand, within Echvi_4285 at 5130.860 kb on + strand, within Echvi_4285 at 5130.861 kb on - strand, within Echvi_4285 at 5130.878 kb on - strand, within Echvi_4285 at 5133.304 kb on + strand, within Echvi_4285 at 5133.304 kb on + strand, within Echvi_4285 at 5133.320 kb on - strand, within Echvi_4285 at 5133.321 kb on + strand, within Echvi_4285 at 5133.394 kb on + strand at 5133.401 kb on + strand at 5133.403 kb on + strand at 5133.409 kb on + strand at 5133.409 kb on + strand at 5133.410 kb on - strand at 5133.410 kb on - strand at 5133.411 kb on + strand at 5133.411 kb on + strand at 5133.417 kb on + strand at 5133.417 kb on + strand at 5133.418 kb on - strand at 5133.426 kb on - strand at 5133.463 kb on + strand at 5133.463 kb on + strand at 5133.464 kb on - strand at 5133.526 kb on + strand at 5133.528 kb on + strand at 5133.529 kb on - strand at 5133.533 kb on - strand at 5133.533 kb on - strand at 5133.541 kb on + strand at 5133.563 kb on - strand at 5133.563 kb on - strand at 5133.566 kb on - strand at 5133.566 kb on - strand at 5133.633 kb on + strand at 5133.645 kb on + strand at 5133.646 kb on - strand at 5133.663 kb on + strand at 5133.663 kb on + strand at 5133.663 kb on + strand at 5133.663 kb on + strand at 5133.681 kb on + strand at 5133.681 kb on + strand at 5133.682 kb on - strand at 5133.686 kb on - strand at 5133.734 kb on + strand at 5133.734 kb on + strand at 5133.734 kb on + strand at 5133.735 kb on - strand at 5133.746 kb on + strand, within Echvi_4289 at 5133.746 kb on + strand, within Echvi_4289 at 5133.746 kb on + strand, within Echvi_4289 at 5133.770 kb on + strand, within Echvi_4289 at 5133.771 kb on - strand, within Echvi_4289 at 5133.773 kb on + strand, within Echvi_4289 at 5133.773 kb on + strand, within Echvi_4289 at 5133.791 kb on - strand, within Echvi_4289 at 5133.791 kb on - strand, within Echvi_4289 at 5133.860 kb on + strand, within Echvi_4289 at 5133.866 kb on + strand, within Echvi_4289 at 5133.866 kb on + strand, within Echvi_4289 at 5133.866 kb on + strand, within Echvi_4289 at 5133.866 kb on + strand, within Echvi_4289 at 5133.867 kb on - strand, within Echvi_4289 at 5133.867 kb on - strand, within Echvi_4289 at 5133.875 kb on + strand, within Echvi_4289 at 5133.875 kb on + strand, within Echvi_4289 at 5133.876 kb on - strand, within Echvi_4289 at 5133.930 kb on - strand, within Echvi_4289 at 5133.949 kb on + strand, within Echvi_4289 at 5133.949 kb on + strand, within Echvi_4289 at 5133.967 kb on + strand, within Echvi_4289 at 5133.968 kb on - strand, within Echvi_4289 at 5133.968 kb on - strand, within Echvi_4289 at 5133.975 kb on - strand, within Echvi_4289 at 5133.975 kb on - strand, within Echvi_4289 at 5133.982 kb on - strand, within Echvi_4289 at 5134.020 kb on - strand, within Echvi_4289 at 5134.020 kb on - strand, within Echvi_4289 at 5134.085 kb on - strand, within Echvi_4289 at 5134.087 kb on + strand, within Echvi_4289 at 5134.088 kb on - strand, within Echvi_4289 at 5134.107 kb on + strand, within Echvi_4289 at 5134.108 kb on - strand, within Echvi_4289 at 5134.127 kb on - strand, within Echvi_4289 at 5134.135 kb on + strand, within Echvi_4289 at 5134.142 kb on + strand, within Echvi_4289 at 5134.142 kb on + strand, within Echvi_4289 at 5134.142 kb on + strand, within Echvi_4289 at 5134.142 kb on + strand, within Echvi_4289 at 5134.143 kb on - strand, within Echvi_4289 at 5134.143 kb on - strand, within Echvi_4289 at 5134.143 kb on - strand, within Echvi_4289 at 5134.143 kb on - strand, within Echvi_4289 at 5134.144 kb on + strand, within Echvi_4289 at 5134.144 kb on + strand, within Echvi_4289 at 5134.145 kb on - strand, within Echvi_4289 at 5134.145 kb on - strand, within Echvi_4289 at 5134.145 kb on - strand, within Echvi_4289 at 5134.145 kb on - strand, within Echvi_4289 at 5134.145 kb on - strand, within Echvi_4289 at 5134.145 kb on - strand, within Echvi_4289 at 5134.184 kb on + strand, within Echvi_4289 at 5134.231 kb on - strand at 5134.238 kb on + strand at 5134.289 kb on + strand at 5134.299 kb on - strand at 5134.310 kb on - strand at 5134.311 kb on + strand at 5134.312 kb on - strand at 5134.312 kb on - strand at 5134.315 kb on + strand at 5134.331 kb on + strand at 5134.331 kb on + strand at 5134.331 kb on + strand at 5134.331 kb on + strand at 5134.352 kb on + strand at 5134.352 kb on + strand at 5134.352 kb on + strand at 5134.404 kb on + strand at 5134.417 kb on + strand, within Echvi_4290 at 5134.418 kb on - strand, within Echvi_4290 at 5134.418 kb on - strand, within Echvi_4290 at 5134.418 kb on - strand, within Echvi_4290 at 5134.422 kb on - strand, within Echvi_4290 at 5134.474 kb on - strand, within Echvi_4290 at 5134.499 kb on + strand, within Echvi_4290 at 5134.615 kb on + strand, within Echvi_4290 at 5134.653 kb on + strand, within Echvi_4290
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.025 mg/ml remove 5,129,466 + Echvi_4284 0.30 +0.4 5,129,466 + Echvi_4284 0.30 +0.4 5,129,473 + Echvi_4284 0.30 -0.1 5,129,556 - Echvi_4284 0.36 -0.2 5,129,562 + Echvi_4284 0.36 +1.2 5,129,562 + Echvi_4284 0.36 -0.3 5,129,563 - Echvi_4284 0.37 -0.3 5,129,599 - Echvi_4284 0.39 +0.5 5,129,606 - Echvi_4284 0.40 -0.4 5,129,608 + Echvi_4284 0.40 +0.2 5,129,611 + Echvi_4284 0.40 -1.2 5,129,656 + Echvi_4284 0.43 -1.3 5,129,707 + Echvi_4284 0.47 -1.2 5,129,707 + Echvi_4284 0.47 -0.0 5,129,708 - Echvi_4284 0.47 -0.2 5,129,708 - Echvi_4284 0.47 -0.4 5,129,728 + Echvi_4284 0.48 -0.1 5,129,733 - Echvi_4284 0.49 -0.4 5,129,759 - Echvi_4284 0.51 -0.1 5,129,801 + Echvi_4284 0.54 -0.0 5,129,803 + Echvi_4284 0.54 -0.7 5,129,803 + Echvi_4284 0.54 +0.1 5,129,803 + Echvi_4284 0.54 -1.1 5,129,804 - Echvi_4284 0.54 -0.4 5,129,826 + Echvi_4284 0.55 -1.2 5,129,827 - Echvi_4284 0.56 -0.1 5,129,881 - Echvi_4284 0.59 +0.7 5,129,939 + Echvi_4284 0.64 -1.2 5,129,939 + Echvi_4284 0.64 -0.5 5,129,951 - Echvi_4284 0.64 +0.5 5,130,014 + Echvi_4284 0.69 +0.0 5,130,015 - Echvi_4284 0.69 +0.6 5,130,015 - Echvi_4284 0.69 -0.8 5,130,015 - Echvi_4284 0.69 -0.8 5,130,023 - +0.9 5,130,023 - Echvi_4284 0.70 -1.5 5,130,023 - Echvi_4284 0.70 +1.3 5,130,037 - Echvi_4284 0.71 -1.5 5,130,051 + +0.5 5,130,052 - Echvi_4284 0.72 +0.1 5,130,052 - Echvi_4284 0.72 +0.3 5,130,052 - Echvi_4284 0.72 +1.3 5,130,060 + Echvi_4284 0.72 +0.1 5,130,060 + Echvi_4284 0.72 -0.5 5,130,060 + Echvi_4284 0.72 -0.1 5,130,061 - Echvi_4284 0.72 -0.2 5,130,067 + Echvi_4284 0.73 -0.8 5,130,068 - Echvi_4284 0.73 -0.1 5,130,111 - Echvi_4284 0.76 -0.1 5,130,111 - Echvi_4284 0.76 +0.9 5,130,111 - Echvi_4284 0.76 +0.3 5,130,112 + Echvi_4284 0.76 +1.7 5,130,112 + Echvi_4284 0.76 -0.2 5,130,112 + Echvi_4284 0.76 -0.6 5,130,113 - Echvi_4284 0.76 +0.2 5,130,113 - Echvi_4284 0.76 -2.0 5,130,125 - Echvi_4284 0.77 +0.3 5,130,149 - Echvi_4284 0.79 +0.6 5,130,157 + Echvi_4284 0.79 +0.1 5,130,182 - Echvi_4284 0.81 +0.4 5,130,182 - Echvi_4284 0.81 -0.1 5,130,187 + Echvi_4284 0.81 +1.1 5,130,187 + Echvi_4284 0.81 -2.7 5,130,222 + Echvi_4284 0.84 -0.3 5,130,222 + Echvi_4284 0.84 +0.8 5,130,225 + Echvi_4284 0.84 +0.3 5,130,226 - Echvi_4284 0.84 -1.0 5,130,232 - Echvi_4284 0.85 -0.7 5,130,253 + Echvi_4284 0.86 +0.3 5,130,292 - Echvi_4284 0.89 -0.9 5,130,316 - -1.7 5,130,323 + -0.4 5,130,324 - -0.2 5,130,349 - +0.6 5,130,367 - -0.1 5,130,368 + -0.2 5,130,368 + -0.9 5,130,368 + +0.9 5,130,369 - -0.8 5,130,409 + -0.3 5,130,449 - +0.5 5,130,451 - -0.3 5,130,451 - +1.1 5,130,456 - +0.1 5,130,459 + +0.2 5,130,460 - -0.2 5,130,531 - +0.1 5,130,536 + -0.3 5,130,536 + -2.4 5,130,536 + -1.3 5,130,536 + +1.3 5,130,536 + -0.2 5,130,573 + -0.4 5,130,577 + -0.1 5,130,577 + +0.0 5,130,578 - +0.1 5,130,583 + +0.1 5,130,587 - -0.8 5,130,594 - +1.6 5,130,596 - +0.2 5,130,608 - -0.2 5,130,623 + +0.6 5,130,650 - -0.8 5,130,666 - -0.9 5,130,728 + +0.0 5,130,729 - +0.1 5,130,735 - +0.4 5,130,779 + Echvi_4285 0.10 +0.2 5,130,788 + Echvi_4285 0.10 -0.8 5,130,789 - Echvi_4285 0.10 -0.2 5,130,824 + Echvi_4285 0.11 +1.4 5,130,828 - Echvi_4285 0.12 -0.2 5,130,860 + Echvi_4285 0.13 -1.1 5,130,861 - Echvi_4285 0.13 +1.4 5,130,878 - Echvi_4285 0.13 +1.6 5,133,304 + Echvi_4285 0.89 +0.5 5,133,304 + Echvi_4285 0.89 -1.7 5,133,320 - Echvi_4285 0.89 -0.6 5,133,321 + Echvi_4285 0.89 -0.5 5,133,394 + +0.9 5,133,401 + -0.5 5,133,403 + -0.0 5,133,409 + -0.2 5,133,409 + +0.3 5,133,410 - +0.0 5,133,410 - +0.2 5,133,411 + -0.3 5,133,411 + +0.8 5,133,417 + -0.4 5,133,417 + -1.8 5,133,418 - +0.1 5,133,426 - -1.1 5,133,463 + -0.4 5,133,463 + -0.7 5,133,464 - -0.2 5,133,526 + -0.2 5,133,528 + +0.5 5,133,529 - -0.7 5,133,533 - -0.2 5,133,533 - +1.4 5,133,541 + -0.4 5,133,563 - +1.5 5,133,563 - -1.2 5,133,566 - -0.4 5,133,566 - -0.5 5,133,633 + -1.0 5,133,645 + -2.8 5,133,646 - -1.1 5,133,663 + +0.2 5,133,663 + +1.2 5,133,663 + -1.3 5,133,663 + +0.7 5,133,681 + +0.7 5,133,681 + +1.2 5,133,682 - -1.2 5,133,686 - -0.2 5,133,734 + +0.2 5,133,734 + -0.1 5,133,734 + -0.8 5,133,735 - -0.7 5,133,746 + Echvi_4289 0.12 +1.0 5,133,746 + Echvi_4289 0.12 -1.9 5,133,746 + Echvi_4289 0.12 -0.7 5,133,770 + Echvi_4289 0.16 +0.6 5,133,771 - Echvi_4289 0.16 -0.1 5,133,773 + Echvi_4289 0.16 -0.9 5,133,773 + Echvi_4289 0.16 -0.6 5,133,791 - Echvi_4289 0.19 +0.4 5,133,791 - Echvi_4289 0.19 -0.5 5,133,860 + Echvi_4289 0.31 +0.2 5,133,866 + Echvi_4289 0.32 +0.6 5,133,866 + Echvi_4289 0.32 +0.1 5,133,866 + Echvi_4289 0.32 -1.0 5,133,866 + Echvi_4289 0.32 +2.2 5,133,867 - Echvi_4289 0.33 -0.1 5,133,867 - Echvi_4289 0.33 -0.4 5,133,875 + Echvi_4289 0.34 +0.3 5,133,875 + Echvi_4289 0.34 +0.8 5,133,876 - Echvi_4289 0.34 +0.6 5,133,930 - Echvi_4289 0.44 -0.4 5,133,949 + Echvi_4289 0.47 +0.4 5,133,949 + Echvi_4289 0.47 -0.0 5,133,967 + Echvi_4289 0.50 -0.3 5,133,968 - Echvi_4289 0.50 -0.2 5,133,968 - Echvi_4289 0.50 -0.3 5,133,975 - Echvi_4289 0.51 +1.4 5,133,975 - Echvi_4289 0.51 -0.9 5,133,982 - Echvi_4289 0.53 +0.4 5,134,020 - Echvi_4289 0.59 +0.7 5,134,020 - Echvi_4289 0.59 +0.4 5,134,085 - Echvi_4289 0.71 -0.5 5,134,087 + Echvi_4289 0.71 +0.2 5,134,088 - Echvi_4289 0.71 +0.3 5,134,107 + Echvi_4289 0.75 +0.3 5,134,108 - Echvi_4289 0.75 +0.4 5,134,127 - Echvi_4289 0.78 +0.2 5,134,135 + Echvi_4289 0.79 +0.4 5,134,142 + Echvi_4289 0.81 -0.2 5,134,142 + Echvi_4289 0.81 +0.3 5,134,142 + Echvi_4289 0.81 +0.1 5,134,142 + Echvi_4289 0.81 -0.5 5,134,143 - Echvi_4289 0.81 -1.0 5,134,143 - Echvi_4289 0.81 +0.6 5,134,143 - Echvi_4289 0.81 +1.2 5,134,143 - Echvi_4289 0.81 -1.0 5,134,144 + Echvi_4289 0.81 -1.5 5,134,144 + Echvi_4289 0.81 -0.2 5,134,145 - Echvi_4289 0.81 +0.3 5,134,145 - Echvi_4289 0.81 +0.1 5,134,145 - Echvi_4289 0.81 +0.1 5,134,145 - Echvi_4289 0.81 +0.5 5,134,145 - Echvi_4289 0.81 +1.3 5,134,145 - Echvi_4289 0.81 +0.3 5,134,184 + Echvi_4289 0.88 +1.0 5,134,231 - +0.9 5,134,238 + -0.2 5,134,289 + -0.0 5,134,299 - +0.2 5,134,310 - +0.9 5,134,311 + +1.4 5,134,312 - -0.7 5,134,312 - +0.2 5,134,315 + +0.6 5,134,331 + +0.7 5,134,331 + +0.1 5,134,331 + +1.1 5,134,331 + +0.7 5,134,352 + -0.2 5,134,352 + +0.3 5,134,352 + +0.6 5,134,404 + +1.8 5,134,417 + Echvi_4290 0.11 -0.2 5,134,418 - Echvi_4290 0.11 -0.6 5,134,418 - Echvi_4290 0.11 +0.1 5,134,418 - Echvi_4290 0.11 -0.2 5,134,422 - Echvi_4290 0.12 -1.6 5,134,474 - Echvi_4290 0.25 +0.0 5,134,499 + Echvi_4290 0.31 +0.2 5,134,615 + Echvi_4290 0.60 -1.8 5,134,653 + Echvi_4290 0.69 +0.3
Or see this region's nucleotide sequence