Experiment: m.b. Thallium(I) acetate 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4218 and Echvi_4219 overlap by 4 nucleotides Echvi_4219 and Echvi_4220 are separated by 367 nucleotides
Echvi_4218: Echvi_4218 - RND family efflux transporter, MFP subunit, at 5,053,069 to 5,054,256
_4218
Echvi_4219: Echvi_4219 - Cation/multidrug efflux pump, at 5,054,253 to 5,057,354
_4219
Echvi_4220: Echvi_4220 - Outer membrane protein/protective antigen OMA87, at 5,057,722 to 5,058,969
_4220
Position (kb)
5054
5055
5056
5057
5058 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 5053.283 kb on + strand, within Echvi_4218 at 5053.307 kb on + strand, within Echvi_4218 at 5053.308 kb on - strand, within Echvi_4218 at 5053.308 kb on - strand, within Echvi_4218 at 5053.607 kb on + strand, within Echvi_4218 at 5054.025 kb on - strand, within Echvi_4218 at 5054.045 kb on - strand, within Echvi_4218 at 5054.138 kb on - strand at 5054.299 kb on - strand at 5054.338 kb on + strand at 5054.338 kb on + strand at 5054.338 kb on + strand at 5054.339 kb on - strand at 5054.339 kb on - strand at 5054.339 kb on - strand at 5054.341 kb on + strand at 5054.422 kb on + strand at 5054.856 kb on + strand, within Echvi_4219 at 5055.031 kb on + strand, within Echvi_4219 at 5055.031 kb on + strand, within Echvi_4219 at 5055.117 kb on - strand, within Echvi_4219 at 5055.298 kb on + strand, within Echvi_4219 at 5055.514 kb on - strand, within Echvi_4219 at 5055.518 kb on + strand at 5055.519 kb on - strand, within Echvi_4219 at 5055.612 kb on + strand, within Echvi_4219 at 5055.612 kb on + strand, within Echvi_4219 at 5055.613 kb on - strand, within Echvi_4219 at 5055.725 kb on + strand, within Echvi_4219 at 5055.772 kb on - strand, within Echvi_4219 at 5055.816 kb on + strand, within Echvi_4219 at 5055.816 kb on + strand, within Echvi_4219 at 5055.816 kb on + strand, within Echvi_4219 at 5055.817 kb on - strand, within Echvi_4219 at 5055.819 kb on + strand, within Echvi_4219 at 5055.819 kb on + strand, within Echvi_4219 at 5055.820 kb on - strand, within Echvi_4219 at 5055.855 kb on + strand, within Echvi_4219 at 5056.378 kb on - strand, within Echvi_4219 at 5056.407 kb on - strand, within Echvi_4219 at 5056.440 kb on - strand, within Echvi_4219 at 5056.583 kb on + strand, within Echvi_4219 at 5056.655 kb on + strand, within Echvi_4219 at 5056.655 kb on + strand, within Echvi_4219 at 5056.696 kb on + strand, within Echvi_4219 at 5056.696 kb on + strand, within Echvi_4219 at 5056.696 kb on + strand, within Echvi_4219 at 5056.696 kb on + strand, within Echvi_4219 at 5056.708 kb on + strand, within Echvi_4219 at 5056.708 kb on + strand, within Echvi_4219 at 5056.709 kb on - strand, within Echvi_4219 at 5056.709 kb on - strand, within Echvi_4219 at 5056.880 kb on - strand, within Echvi_4219 at 5056.880 kb on - strand, within Echvi_4219 at 5056.880 kb on - strand, within Echvi_4219 at 5056.976 kb on + strand, within Echvi_4219 at 5056.990 kb on - strand, within Echvi_4219 at 5056.990 kb on - strand, within Echvi_4219 at 5056.990 kb on - strand, within Echvi_4219 at 5057.044 kb on + strand at 5057.045 kb on - strand at 5057.078 kb on + strand at 5057.180 kb on + strand at 5057.180 kb on + strand at 5057.189 kb on + strand at 5057.218 kb on - strand at 5057.236 kb on + strand at 5057.298 kb on + strand at 5057.398 kb on + strand at 5057.570 kb on + strand at 5057.573 kb on + strand at 5057.643 kb on + strand at 5057.644 kb on - strand at 5057.797 kb on + strand at 5057.893 kb on - strand, within Echvi_4220 at 5057.896 kb on + strand, within Echvi_4220 at 5057.926 kb on - strand, within Echvi_4220 at 5058.016 kb on - strand, within Echvi_4220 at 5058.075 kb on + strand, within Echvi_4220 at 5058.247 kb on + strand, within Echvi_4220 at 5058.263 kb on + strand, within Echvi_4220 at 5058.340 kb on + strand, within Echvi_4220 at 5058.340 kb on + strand, within Echvi_4220 at 5058.340 kb on + strand, within Echvi_4220 at 5058.340 kb on + strand, within Echvi_4220 at 5058.346 kb on + strand, within Echvi_4220
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.025 mg/ml remove 5,053,283 + Echvi_4218 0.18 +0.1 5,053,307 + Echvi_4218 0.20 -2.7 5,053,308 - Echvi_4218 0.20 +0.5 5,053,308 - Echvi_4218 0.20 +0.1 5,053,607 + Echvi_4218 0.45 +0.5 5,054,025 - Echvi_4218 0.80 -1.7 5,054,045 - Echvi_4218 0.82 -0.9 5,054,138 - +0.1 5,054,299 - +2.0 5,054,338 + +0.1 5,054,338 + -0.5 5,054,338 + +1.6 5,054,339 - -2.2 5,054,339 - +0.9 5,054,339 - +0.2 5,054,341 + -0.2 5,054,422 + +1.5 5,054,856 + Echvi_4219 0.19 -0.9 5,055,031 + Echvi_4219 0.25 +0.2 5,055,031 + Echvi_4219 0.25 -1.5 5,055,117 - Echvi_4219 0.28 -2.5 5,055,298 + Echvi_4219 0.34 -0.4 5,055,514 - Echvi_4219 0.41 -0.1 5,055,518 + +0.1 5,055,519 - Echvi_4219 0.41 +0.1 5,055,612 + Echvi_4219 0.44 -1.2 5,055,612 + Echvi_4219 0.44 -1.0 5,055,613 - Echvi_4219 0.44 +0.2 5,055,725 + Echvi_4219 0.47 -2.4 5,055,772 - Echvi_4219 0.49 +0.9 5,055,816 + Echvi_4219 0.50 -1.5 5,055,816 + Echvi_4219 0.50 +0.9 5,055,816 + Echvi_4219 0.50 -1.9 5,055,817 - Echvi_4219 0.50 -0.4 5,055,819 + Echvi_4219 0.50 -0.8 5,055,819 + Echvi_4219 0.50 -0.7 5,055,820 - Echvi_4219 0.51 -3.0 5,055,855 + Echvi_4219 0.52 -0.6 5,056,378 - Echvi_4219 0.69 -0.0 5,056,407 - Echvi_4219 0.69 +0.2 5,056,440 - Echvi_4219 0.71 +1.1 5,056,583 + Echvi_4219 0.75 -0.5 5,056,655 + Echvi_4219 0.77 +2.2 5,056,655 + Echvi_4219 0.77 +0.7 5,056,696 + Echvi_4219 0.79 -0.9 5,056,696 + Echvi_4219 0.79 -0.7 5,056,696 + Echvi_4219 0.79 -0.1 5,056,696 + Echvi_4219 0.79 +0.3 5,056,708 + Echvi_4219 0.79 -0.3 5,056,708 + Echvi_4219 0.79 -0.7 5,056,709 - Echvi_4219 0.79 -0.3 5,056,709 - Echvi_4219 0.79 +0.1 5,056,880 - Echvi_4219 0.85 -0.4 5,056,880 - Echvi_4219 0.85 -1.1 5,056,880 - Echvi_4219 0.85 +0.1 5,056,976 + Echvi_4219 0.88 -0.1 5,056,990 - Echvi_4219 0.88 -1.5 5,056,990 - Echvi_4219 0.88 -1.1 5,056,990 - Echvi_4219 0.88 +0.0 5,057,044 + -1.1 5,057,045 - -0.6 5,057,078 + -1.2 5,057,180 + +0.0 5,057,180 + -0.1 5,057,189 + -1.2 5,057,218 - -0.4 5,057,236 + -0.2 5,057,298 + -0.5 5,057,398 + -1.5 5,057,570 + -1.5 5,057,573 + +0.7 5,057,643 + +0.0 5,057,644 - -0.5 5,057,797 + -1.2 5,057,893 - Echvi_4220 0.14 +1.2 5,057,896 + Echvi_4220 0.14 -0.0 5,057,926 - Echvi_4220 0.16 +0.4 5,058,016 - Echvi_4220 0.24 -0.6 5,058,075 + Echvi_4220 0.28 -2.3 5,058,247 + Echvi_4220 0.42 +0.3 5,058,263 + Echvi_4220 0.43 +0.1 5,058,340 + Echvi_4220 0.50 +0.6 5,058,340 + Echvi_4220 0.50 -0.5 5,058,340 + Echvi_4220 0.50 +0.7 5,058,340 + Echvi_4220 0.50 -0.5 5,058,346 + Echvi_4220 0.50 -0.5
Or see this region's nucleotide sequence