Experiment: m.b. Thallium(I) acetate 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3954 and Echvi_3955 overlap by 8 nucleotides Echvi_3955 and Echvi_3956 are separated by 52 nucleotides Echvi_3956 and Echvi_3957 are separated by 142 nucleotides
Echvi_3954: Echvi_3954 - exodeoxyribonuclease VII, large subunit, at 4,739,416 to 4,740,729
_3954
Echvi_3955: Echvi_3955 - Exonuclease VII small subunit., at 4,740,722 to 4,740,928
_3955
Echvi_3956: Echvi_3956 - Transcriptional regulator, at 4,740,981 to 4,741,625
_3956
Echvi_3957: Echvi_3957 - DNA ligase, NAD-dependent, at 4,741,768 to 4,744,230
_3957
Position (kb)
4740
4741
4742 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4740.139 kb on - strand, within Echvi_3954 at 4740.291 kb on + strand, within Echvi_3954 at 4740.292 kb on - strand, within Echvi_3954 at 4740.292 kb on - strand, within Echvi_3954 at 4740.297 kb on - strand, within Echvi_3954 at 4740.456 kb on - strand, within Echvi_3954 at 4740.461 kb on + strand, within Echvi_3954 at 4740.461 kb on + strand, within Echvi_3954 at 4740.462 kb on - strand, within Echvi_3954 at 4740.603 kb on + strand at 4740.603 kb on + strand at 4740.603 kb on + strand at 4740.674 kb on - strand at 4740.674 kb on - strand at 4740.674 kb on - strand at 4740.747 kb on - strand, within Echvi_3955 at 4740.852 kb on + strand, within Echvi_3955 at 4740.898 kb on - strand, within Echvi_3955 at 4740.947 kb on + strand at 4740.948 kb on - strand at 4740.949 kb on + strand at 4741.001 kb on - strand at 4741.001 kb on - strand at 4741.001 kb on - strand at 4741.038 kb on + strand at 4741.038 kb on + strand at 4741.041 kb on - strand at 4741.061 kb on - strand, within Echvi_3956 at 4741.261 kb on + strand, within Echvi_3956 at 4741.262 kb on - strand, within Echvi_3956 at 4741.262 kb on - strand, within Echvi_3956 at 4741.262 kb on - strand, within Echvi_3956 at 4741.446 kb on - strand, within Echvi_3956 at 4741.560 kb on + strand, within Echvi_3956 at 4741.650 kb on - strand at 4741.650 kb on - strand at 4741.652 kb on - strand at 4741.655 kb on + strand at 4741.655 kb on + strand at 4741.655 kb on + strand at 4741.655 kb on + strand at 4741.656 kb on - strand at 4741.656 kb on - strand at 4741.656 kb on - strand at 4741.656 kb on - strand at 4741.656 kb on - strand at 4741.656 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.025 mg/ml remove 4,740,139 - Echvi_3954 0.55 +0.0 4,740,291 + Echvi_3954 0.67 +1.1 4,740,292 - Echvi_3954 0.67 +1.7 4,740,292 - Echvi_3954 0.67 -0.3 4,740,297 - Echvi_3954 0.67 +0.0 4,740,456 - Echvi_3954 0.79 +0.6 4,740,461 + Echvi_3954 0.80 -0.8 4,740,461 + Echvi_3954 0.80 -0.7 4,740,462 - Echvi_3954 0.80 +0.4 4,740,603 + +0.0 4,740,603 + -0.6 4,740,603 + +0.1 4,740,674 - +0.4 4,740,674 - +0.5 4,740,674 - -1.7 4,740,747 - Echvi_3955 0.12 -0.8 4,740,852 + Echvi_3955 0.63 -0.9 4,740,898 - Echvi_3955 0.85 +1.0 4,740,947 + +1.3 4,740,948 - +0.5 4,740,949 + -0.1 4,741,001 - +0.5 4,741,001 - +0.7 4,741,001 - +0.0 4,741,038 + +0.9 4,741,038 + +0.5 4,741,041 - -0.7 4,741,061 - Echvi_3956 0.12 +1.5 4,741,261 + Echvi_3956 0.43 +0.1 4,741,262 - Echvi_3956 0.44 -0.4 4,741,262 - Echvi_3956 0.44 +1.0 4,741,262 - Echvi_3956 0.44 +0.2 4,741,446 - Echvi_3956 0.72 +0.5 4,741,560 + Echvi_3956 0.90 +0.2 4,741,650 - -0.9 4,741,650 - +2.3 4,741,652 - -0.5 4,741,655 + +0.4 4,741,655 + +0.6 4,741,655 + -0.4 4,741,655 + -0.6 4,741,656 - -0.1 4,741,656 - -1.8 4,741,656 - +0.3 4,741,656 - -0.5 4,741,656 - -0.5 4,741,656 - +0.4
Or see this region's nucleotide sequence