Experiment: m.b. Thallium(I) acetate 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3171 and Echvi_3172 are separated by 338 nucleotides Echvi_3172 and Echvi_3173 are separated by 145 nucleotides Echvi_3173 and Echvi_3174 are separated by 11 nucleotides
Echvi_3171: Echvi_3171 - Arabinose efflux permease, at 3,777,617 to 3,778,834
_3171
Echvi_3172: Echvi_3172 - hypothetical protein, at 3,779,173 to 3,779,430
_3172
Echvi_3173: Echvi_3173 - hypothetical protein, at 3,779,576 to 3,780,022
_3173
Echvi_3174: Echvi_3174 - Conjugative transposon protein TraO., at 3,780,034 to 3,780,594
_3174
Position (kb)
3779
3780 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3778.191 kb on + strand, within Echvi_3171 at 3778.206 kb on + strand, within Echvi_3171 at 3778.295 kb on + strand, within Echvi_3171 at 3778.459 kb on - strand, within Echvi_3171 at 3778.493 kb on - strand, within Echvi_3171 at 3778.582 kb on - strand, within Echvi_3171 at 3778.616 kb on - strand, within Echvi_3171 at 3778.621 kb on + strand, within Echvi_3171 at 3778.622 kb on - strand, within Echvi_3171 at 3778.622 kb on - strand, within Echvi_3171 at 3778.622 kb on - strand, within Echvi_3171 at 3778.661 kb on - strand, within Echvi_3171 at 3778.661 kb on - strand, within Echvi_3171 at 3778.661 kb on - strand, within Echvi_3171 at 3778.755 kb on - strand at 3778.789 kb on - strand at 3778.843 kb on + strand at 3778.966 kb on - strand at 3778.968 kb on - strand at 3778.968 kb on - strand at 3778.968 kb on - strand at 3778.972 kb on + strand at 3778.973 kb on - strand at 3778.973 kb on - strand at 3778.979 kb on - strand at 3779.020 kb on - strand at 3779.021 kb on + strand at 3779.022 kb on - strand at 3779.027 kb on - strand at 3779.035 kb on - strand at 3779.035 kb on - strand at 3779.035 kb on - strand at 3779.072 kb on + strand at 3779.076 kb on + strand at 3779.076 kb on + strand at 3779.077 kb on - strand at 3779.232 kb on - strand, within Echvi_3172 at 3779.240 kb on - strand, within Echvi_3172 at 3779.312 kb on - strand, within Echvi_3172 at 3779.352 kb on + strand, within Echvi_3172 at 3779.353 kb on - strand, within Echvi_3172 at 3779.388 kb on - strand, within Echvi_3172 at 3779.391 kb on + strand, within Echvi_3172 at 3779.421 kb on + strand at 3779.443 kb on + strand at 3779.477 kb on + strand at 3779.498 kb on + strand at 3779.532 kb on + strand at 3779.533 kb on - strand at 3779.533 kb on - strand at 3779.542 kb on + strand at 3779.542 kb on + strand at 3779.543 kb on - strand at 3779.543 kb on - strand at 3779.677 kb on - strand, within Echvi_3173 at 3779.679 kb on + strand, within Echvi_3173 at 3779.679 kb on + strand, within Echvi_3173 at 3779.680 kb on - strand, within Echvi_3173 at 3779.680 kb on - strand, within Echvi_3173 at 3779.682 kb on - strand, within Echvi_3173 at 3779.712 kb on - strand, within Echvi_3173 at 3779.742 kb on + strand, within Echvi_3173 at 3779.778 kb on + strand, within Echvi_3173 at 3779.879 kb on + strand, within Echvi_3173 at 3779.879 kb on + strand, within Echvi_3173 at 3779.879 kb on + strand, within Echvi_3173 at 3779.880 kb on - strand, within Echvi_3173 at 3779.880 kb on - strand, within Echvi_3173 at 3779.974 kb on + strand, within Echvi_3173 at 3779.975 kb on - strand, within Echvi_3173 at 3779.975 kb on - strand, within Echvi_3173 at 3779.980 kb on + strand at 3780.026 kb on - strand at 3780.026 kb on - strand at 3780.049 kb on + strand at 3780.056 kb on - strand at 3780.127 kb on + strand, within Echvi_3174 at 3780.127 kb on + strand, within Echvi_3174 at 3780.128 kb on - strand, within Echvi_3174 at 3780.146 kb on + strand, within Echvi_3174 at 3780.146 kb on + strand, within Echvi_3174 at 3780.146 kb on + strand, within Echvi_3174 at 3780.147 kb on - strand, within Echvi_3174 at 3780.199 kb on + strand, within Echvi_3174 at 3780.199 kb on + strand, within Echvi_3174 at 3780.199 kb on + strand, within Echvi_3174 at 3780.199 kb on + strand, within Echvi_3174 at 3780.200 kb on - strand, within Echvi_3174 at 3780.200 kb on - strand, within Echvi_3174 at 3780.200 kb on - strand, within Echvi_3174 at 3780.202 kb on + strand, within Echvi_3174 at 3780.323 kb on + strand, within Echvi_3174 at 3780.370 kb on - strand, within Echvi_3174 at 3780.370 kb on - strand, within Echvi_3174 at 3780.370 kb on - strand, within Echvi_3174 at 3780.371 kb on + strand, within Echvi_3174 at 3780.371 kb on + strand, within Echvi_3174 at 3780.392 kb on + strand, within Echvi_3174 at 3780.413 kb on + strand, within Echvi_3174
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.025 mg/ml remove 3,778,191 + Echvi_3171 0.47 -0.2 3,778,206 + Echvi_3171 0.48 -0.6 3,778,295 + Echvi_3171 0.56 -1.0 3,778,459 - Echvi_3171 0.69 -0.4 3,778,493 - Echvi_3171 0.72 +0.3 3,778,582 - Echvi_3171 0.79 -0.2 3,778,616 - Echvi_3171 0.82 +0.8 3,778,621 + Echvi_3171 0.82 +0.1 3,778,622 - Echvi_3171 0.83 +0.2 3,778,622 - Echvi_3171 0.83 -0.2 3,778,622 - Echvi_3171 0.83 -0.4 3,778,661 - Echvi_3171 0.86 +0.3 3,778,661 - Echvi_3171 0.86 +1.9 3,778,661 - Echvi_3171 0.86 -0.1 3,778,755 - +0.2 3,778,789 - +0.2 3,778,843 + -0.7 3,778,966 - +0.1 3,778,968 - +0.6 3,778,968 - -0.2 3,778,968 - +0.8 3,778,972 + +0.1 3,778,973 - +0.5 3,778,973 - +0.1 3,778,979 - +0.7 3,779,020 - -0.2 3,779,021 + +1.1 3,779,022 - +0.2 3,779,027 - +0.1 3,779,035 - -0.9 3,779,035 - -2.4 3,779,035 - -0.2 3,779,072 + -0.4 3,779,076 + -0.2 3,779,076 + +1.4 3,779,077 - +0.2 3,779,232 - Echvi_3172 0.23 -1.0 3,779,240 - Echvi_3172 0.26 -1.2 3,779,312 - Echvi_3172 0.54 +0.2 3,779,352 + Echvi_3172 0.69 +1.4 3,779,353 - Echvi_3172 0.70 +0.5 3,779,388 - Echvi_3172 0.83 +1.1 3,779,391 + Echvi_3172 0.84 +0.1 3,779,421 + +0.5 3,779,443 + +0.9 3,779,477 + -0.3 3,779,498 + -0.2 3,779,532 + -1.5 3,779,533 - -1.0 3,779,533 - -0.0 3,779,542 + -0.7 3,779,542 + +0.6 3,779,543 - +0.2 3,779,543 - -0.0 3,779,677 - Echvi_3173 0.23 -0.7 3,779,679 + Echvi_3173 0.23 -0.6 3,779,679 + Echvi_3173 0.23 +0.1 3,779,680 - Echvi_3173 0.23 -1.1 3,779,680 - Echvi_3173 0.23 -1.0 3,779,682 - Echvi_3173 0.24 -0.2 3,779,712 - Echvi_3173 0.30 +0.4 3,779,742 + Echvi_3173 0.37 -0.3 3,779,778 + Echvi_3173 0.45 +0.1 3,779,879 + Echvi_3173 0.68 +0.3 3,779,879 + Echvi_3173 0.68 +0.3 3,779,879 + Echvi_3173 0.68 +0.3 3,779,880 - Echvi_3173 0.68 -1.5 3,779,880 - Echvi_3173 0.68 -1.5 3,779,974 + Echvi_3173 0.89 +0.3 3,779,975 - Echvi_3173 0.89 -0.5 3,779,975 - Echvi_3173 0.89 -2.0 3,779,980 + -1.6 3,780,026 - +1.7 3,780,026 - -0.1 3,780,049 + -1.1 3,780,056 - -0.4 3,780,127 + Echvi_3174 0.17 +1.2 3,780,127 + Echvi_3174 0.17 +0.6 3,780,128 - Echvi_3174 0.17 +0.5 3,780,146 + Echvi_3174 0.20 -0.6 3,780,146 + Echvi_3174 0.20 -0.7 3,780,146 + Echvi_3174 0.20 -0.5 3,780,147 - Echvi_3174 0.20 -1.3 3,780,199 + Echvi_3174 0.29 -0.2 3,780,199 + Echvi_3174 0.29 +0.8 3,780,199 + Echvi_3174 0.29 +0.1 3,780,199 + Echvi_3174 0.29 -2.6 3,780,200 - Echvi_3174 0.30 -0.5 3,780,200 - Echvi_3174 0.30 -1.2 3,780,200 - Echvi_3174 0.30 -0.3 3,780,202 + Echvi_3174 0.30 +0.3 3,780,323 + Echvi_3174 0.52 +0.8 3,780,370 - Echvi_3174 0.60 -0.7 3,780,370 - Echvi_3174 0.60 +0.2 3,780,370 - Echvi_3174 0.60 -0.4 3,780,371 + Echvi_3174 0.60 -0.2 3,780,371 + Echvi_3174 0.60 +2.0 3,780,392 + Echvi_3174 0.64 -1.0 3,780,413 + Echvi_3174 0.68 -0.4
Or see this region's nucleotide sequence