Experiment: m.b. Thallium(I) acetate 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2760 and Echvi_2761 are separated by 312 nucleotides Echvi_2761 and Echvi_2762 are separated by 520 nucleotides
Echvi_2760: Echvi_2760 - Signal transduction histidine kinase, at 3,287,870 to 3,291,925
_2760
Echvi_2761: Echvi_2761 - hypothetical protein, at 3,292,238 to 3,292,390
_2761
Echvi_2762: Echvi_2762 - TonB-linked outer membrane protein, SusC/RagA family, at 3,292,911 to 3,296,090
_2762
Position (kb)
3292
3293 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3291.276 kb on + strand, within Echvi_2760 at 3291.311 kb on - strand, within Echvi_2760 at 3291.341 kb on + strand, within Echvi_2760 at 3291.341 kb on + strand, within Echvi_2760 at 3291.341 kb on + strand, within Echvi_2760 at 3291.359 kb on + strand, within Echvi_2760 at 3291.360 kb on - strand, within Echvi_2760 at 3291.366 kb on - strand, within Echvi_2760 at 3291.370 kb on + strand, within Echvi_2760 at 3291.371 kb on - strand, within Echvi_2760 at 3291.371 kb on - strand, within Echvi_2760 at 3291.371 kb on - strand, within Echvi_2760 at 3291.371 kb on - strand, within Echvi_2760 at 3291.484 kb on - strand, within Echvi_2760 at 3291.487 kb on + strand, within Echvi_2760 at 3291.591 kb on + strand at 3291.591 kb on + strand at 3291.592 kb on - strand at 3291.592 kb on - strand at 3291.598 kb on - strand at 3291.623 kb on + strand at 3291.625 kb on + strand at 3291.626 kb on - strand at 3291.665 kb on - strand at 3291.665 kb on - strand at 3291.760 kb on + strand at 3291.780 kb on - strand at 3291.800 kb on - strand at 3291.840 kb on + strand at 3291.890 kb on + strand at 3291.890 kb on + strand at 3291.891 kb on - strand at 3291.896 kb on + strand at 3291.914 kb on - strand at 3291.926 kb on - strand at 3291.956 kb on - strand at 3292.163 kb on - strand at 3292.167 kb on + strand at 3292.173 kb on + strand at 3292.174 kb on - strand at 3292.174 kb on - strand at 3292.179 kb on + strand at 3292.211 kb on - strand at 3292.228 kb on - strand at 3292.228 kb on - strand at 3292.240 kb on - strand at 3292.244 kb on - strand at 3292.333 kb on + strand, within Echvi_2761 at 3292.333 kb on + strand, within Echvi_2761 at 3292.334 kb on - strand, within Echvi_2761 at 3292.334 kb on - strand, within Echvi_2761 at 3292.392 kb on + strand at 3292.433 kb on - strand at 3292.438 kb on - strand at 3292.486 kb on + strand at 3292.487 kb on - strand at 3292.490 kb on + strand at 3292.666 kb on + strand at 3292.705 kb on + strand at 3292.705 kb on + strand at 3292.725 kb on - strand at 3292.725 kb on - strand at 3292.725 kb on - strand at 3292.737 kb on - strand at 3292.778 kb on + strand at 3292.804 kb on + strand at 3292.804 kb on + strand at 3292.805 kb on - strand at 3292.805 kb on - strand at 3292.805 kb on - strand at 3292.805 kb on - strand at 3292.808 kb on + strand at 3292.809 kb on - strand at 3292.809 kb on - strand at 3292.835 kb on + strand at 3292.835 kb on + strand at 3292.835 kb on + strand at 3292.835 kb on + strand at 3292.836 kb on - strand at 3292.836 kb on - strand at 3292.838 kb on + strand at 3292.838 kb on + strand at 3292.838 kb on + strand at 3292.839 kb on - strand at 3292.840 kb on + strand at 3292.840 kb on + strand at 3292.841 kb on - strand at 3292.841 kb on - strand at 3292.841 kb on - strand at 3292.841 kb on - strand at 3292.855 kb on + strand at 3292.856 kb on - strand at 3292.856 kb on - strand at 3292.906 kb on + strand at 3292.959 kb on - strand at 3292.963 kb on - strand at 3293.004 kb on - strand at 3293.126 kb on + strand at 3293.163 kb on - strand at 3293.194 kb on + strand at 3293.195 kb on - strand at 3293.217 kb on - strand at 3293.217 kb on - strand at 3293.217 kb on - strand at 3293.237 kb on - strand, within Echvi_2762
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.025 mg/ml remove 3,291,276 + Echvi_2760 0.84 +1.2 3,291,311 - Echvi_2760 0.85 -0.0 3,291,341 + Echvi_2760 0.86 +0.6 3,291,341 + Echvi_2760 0.86 +0.3 3,291,341 + Echvi_2760 0.86 -0.4 3,291,359 + Echvi_2760 0.86 -0.1 3,291,360 - Echvi_2760 0.86 +0.3 3,291,366 - Echvi_2760 0.86 +0.5 3,291,370 + Echvi_2760 0.86 -0.3 3,291,371 - Echvi_2760 0.86 -1.9 3,291,371 - Echvi_2760 0.86 +0.3 3,291,371 - Echvi_2760 0.86 -0.7 3,291,371 - Echvi_2760 0.86 -0.9 3,291,484 - Echvi_2760 0.89 -1.0 3,291,487 + Echvi_2760 0.89 -0.3 3,291,591 + +0.6 3,291,591 + +0.5 3,291,592 - -1.4 3,291,592 - +0.0 3,291,598 - +0.2 3,291,623 + -1.3 3,291,625 + +1.6 3,291,626 - +1.4 3,291,665 - +1.4 3,291,665 - -1.0 3,291,760 + -1.0 3,291,780 - +0.4 3,291,800 - -0.6 3,291,840 + +0.7 3,291,890 + -0.3 3,291,890 + -2.2 3,291,891 - +1.3 3,291,896 + +1.0 3,291,914 - -0.6 3,291,926 - -1.4 3,291,956 - +0.3 3,292,163 - -0.5 3,292,167 + -1.6 3,292,173 + +0.8 3,292,174 - +0.4 3,292,174 - -0.0 3,292,179 + +0.1 3,292,211 - -0.2 3,292,228 - -0.7 3,292,228 - -0.4 3,292,240 - -0.3 3,292,244 - +0.0 3,292,333 + Echvi_2761 0.62 -0.7 3,292,333 + Echvi_2761 0.62 -0.3 3,292,334 - Echvi_2761 0.63 +0.8 3,292,334 - Echvi_2761 0.63 +1.6 3,292,392 + -2.5 3,292,433 - +0.9 3,292,438 - +0.8 3,292,486 + +0.2 3,292,487 - +0.1 3,292,490 + -2.0 3,292,666 + -0.8 3,292,705 + -0.3 3,292,705 + +0.7 3,292,725 - -0.1 3,292,725 - +0.0 3,292,725 - +1.0 3,292,737 - +0.2 3,292,778 + +0.8 3,292,804 + -0.1 3,292,804 + +1.3 3,292,805 - -1.4 3,292,805 - +0.6 3,292,805 - -0.3 3,292,805 - +0.6 3,292,808 + -0.2 3,292,809 - -1.0 3,292,809 - +0.4 3,292,835 + -0.8 3,292,835 + -0.1 3,292,835 + +0.3 3,292,835 + +0.4 3,292,836 - +0.7 3,292,836 - -1.1 3,292,838 + -0.6 3,292,838 + +2.0 3,292,838 + +0.1 3,292,839 - +0.5 3,292,840 + -1.0 3,292,840 + -0.0 3,292,841 - -0.7 3,292,841 - +2.4 3,292,841 - -0.5 3,292,841 - -0.4 3,292,855 + -0.9 3,292,856 - -0.5 3,292,856 - -1.1 3,292,906 + +0.3 3,292,959 - +0.1 3,292,963 - -0.0 3,293,004 - +0.4 3,293,126 + +0.2 3,293,163 - -0.1 3,293,194 + +0.1 3,293,195 - -1.5 3,293,217 - -0.0 3,293,217 - -0.1 3,293,217 - -1.3 3,293,237 - Echvi_2762 0.10 +0.3
Or see this region's nucleotide sequence