Experiment: m.b. Thallium(I) acetate 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2559 and Echvi_2560 are separated by 148 nucleotides Echvi_2560 and Echvi_2561 overlap by 4 nucleotides Echvi_2561 and Echvi_2562 are separated by 59 nucleotides
Echvi_2559: Echvi_2559 - 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase, at 3,034,467 to 3,036,794
_2559
Echvi_2560: Echvi_2560 - PAS domain S-box, at 3,036,943 to 3,037,335
_2560
Echvi_2561: Echvi_2561 - Acyl-CoA hydrolase, at 3,037,332 to 3,037,724
_2561
Echvi_2562: Echvi_2562 - Predicted phosphatase, at 3,037,784 to 3,039,193
_2562
Position (kb)
3036
3037
3038 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3036.025 kb on - strand, within Echvi_2559 at 3036.075 kb on + strand, within Echvi_2559 at 3036.075 kb on + strand, within Echvi_2559 at 3036.076 kb on - strand, within Echvi_2559 at 3036.176 kb on + strand, within Echvi_2559 at 3036.179 kb on + strand, within Echvi_2559 at 3036.184 kb on + strand, within Echvi_2559 at 3036.184 kb on + strand, within Echvi_2559 at 3036.185 kb on - strand, within Echvi_2559 at 3036.185 kb on - strand, within Echvi_2559 at 3036.185 kb on - strand, within Echvi_2559 at 3036.199 kb on + strand, within Echvi_2559 at 3036.224 kb on + strand, within Echvi_2559 at 3036.455 kb on + strand, within Echvi_2559 at 3036.456 kb on - strand, within Echvi_2559 at 3036.468 kb on - strand, within Echvi_2559 at 3036.468 kb on - strand, within Echvi_2559 at 3036.468 kb on - strand, within Echvi_2559 at 3036.468 kb on - strand, within Echvi_2559 at 3036.469 kb on + strand, within Echvi_2559 at 3036.470 kb on - strand, within Echvi_2559 at 3036.470 kb on - strand, within Echvi_2559 at 3036.470 kb on - strand, within Echvi_2559 at 3036.494 kb on + strand, within Echvi_2559 at 3036.495 kb on - strand, within Echvi_2559 at 3036.548 kb on + strand, within Echvi_2559 at 3036.548 kb on + strand, within Echvi_2559 at 3036.552 kb on + strand, within Echvi_2559 at 3036.580 kb on - strand at 3036.580 kb on - strand at 3036.596 kb on + strand at 3036.602 kb on - strand at 3036.602 kb on - strand at 3036.735 kb on - strand at 3036.759 kb on - strand at 3036.770 kb on + strand at 3036.770 kb on + strand at 3036.782 kb on + strand at 3036.782 kb on + strand at 3036.819 kb on - strand at 3036.838 kb on + strand at 3036.843 kb on + strand at 3036.844 kb on - strand at 3036.846 kb on + strand at 3036.846 kb on + strand at 3036.847 kb on - strand at 3036.847 kb on - strand at 3036.855 kb on + strand at 3036.974 kb on - strand at 3037.027 kb on + strand, within Echvi_2560 at 3037.028 kb on - strand, within Echvi_2560 at 3037.040 kb on + strand, within Echvi_2560 at 3037.068 kb on - strand, within Echvi_2560 at 3037.068 kb on - strand, within Echvi_2560 at 3037.068 kb on - strand, within Echvi_2560 at 3037.102 kb on + strand, within Echvi_2560 at 3037.137 kb on - strand, within Echvi_2560 at 3037.212 kb on + strand, within Echvi_2560 at 3037.232 kb on - strand, within Echvi_2560 at 3037.249 kb on - strand, within Echvi_2560 at 3037.256 kb on + strand, within Echvi_2560 at 3037.256 kb on + strand, within Echvi_2560 at 3037.256 kb on + strand, within Echvi_2560 at 3037.257 kb on - strand, within Echvi_2560 at 3037.288 kb on - strand, within Echvi_2560 at 3037.309 kb on - strand at 3037.309 kb on - strand at 3037.356 kb on - strand at 3037.398 kb on - strand, within Echvi_2561 at 3037.403 kb on - strand, within Echvi_2561 at 3037.411 kb on - strand, within Echvi_2561 at 3037.430 kb on + strand, within Echvi_2561 at 3037.431 kb on - strand, within Echvi_2561 at 3037.431 kb on - strand, within Echvi_2561 at 3037.482 kb on - strand, within Echvi_2561 at 3037.505 kb on - strand, within Echvi_2561 at 3037.573 kb on + strand, within Echvi_2561 at 3037.581 kb on - strand, within Echvi_2561 at 3037.599 kb on - strand, within Echvi_2561 at 3037.613 kb on + strand, within Echvi_2561 at 3037.614 kb on - strand, within Echvi_2561 at 3037.615 kb on + strand, within Echvi_2561 at 3037.616 kb on - strand, within Echvi_2561 at 3037.616 kb on - strand, within Echvi_2561 at 3037.670 kb on + strand, within Echvi_2561 at 3037.709 kb on + strand at 3037.710 kb on - strand at 3037.759 kb on - strand at 3037.922 kb on - strand at 3037.923 kb on + strand at 3037.926 kb on + strand, within Echvi_2562 at 3037.926 kb on + strand, within Echvi_2562 at 3037.967 kb on - strand, within Echvi_2562 at 3037.982 kb on + strand, within Echvi_2562 at 3037.983 kb on - strand, within Echvi_2562 at 3037.985 kb on + strand, within Echvi_2562 at 3037.986 kb on - strand, within Echvi_2562 at 3038.009 kb on + strand, within Echvi_2562 at 3038.127 kb on - strand, within Echvi_2562 at 3038.298 kb on + strand, within Echvi_2562 at 3038.298 kb on + strand, within Echvi_2562 at 3038.330 kb on + strand, within Echvi_2562 at 3038.331 kb on - strand, within Echvi_2562
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.025 mg/ml remove 3,036,025 - Echvi_2559 0.67 -0.9 3,036,075 + Echvi_2559 0.69 -0.5 3,036,075 + Echvi_2559 0.69 +0.8 3,036,076 - Echvi_2559 0.69 -0.6 3,036,176 + Echvi_2559 0.73 -0.9 3,036,179 + Echvi_2559 0.74 +0.1 3,036,184 + Echvi_2559 0.74 -0.7 3,036,184 + Echvi_2559 0.74 -0.8 3,036,185 - Echvi_2559 0.74 +0.6 3,036,185 - Echvi_2559 0.74 +0.8 3,036,185 - Echvi_2559 0.74 +0.2 3,036,199 + Echvi_2559 0.74 +0.1 3,036,224 + Echvi_2559 0.75 +0.8 3,036,455 + Echvi_2559 0.85 +1.9 3,036,456 - Echvi_2559 0.85 -0.2 3,036,468 - Echvi_2559 0.86 -1.0 3,036,468 - Echvi_2559 0.86 -0.4 3,036,468 - Echvi_2559 0.86 +0.5 3,036,468 - Echvi_2559 0.86 +0.9 3,036,469 + Echvi_2559 0.86 -0.5 3,036,470 - Echvi_2559 0.86 -0.3 3,036,470 - Echvi_2559 0.86 -0.2 3,036,470 - Echvi_2559 0.86 +0.1 3,036,494 + Echvi_2559 0.87 -0.5 3,036,495 - Echvi_2559 0.87 -0.8 3,036,548 + Echvi_2559 0.89 +1.8 3,036,548 + Echvi_2559 0.89 -0.1 3,036,552 + Echvi_2559 0.90 -0.6 3,036,580 - -1.3 3,036,580 - +0.7 3,036,596 + +0.2 3,036,602 - -0.2 3,036,602 - -0.7 3,036,735 - -0.8 3,036,759 - -0.0 3,036,770 + -0.4 3,036,770 + -0.8 3,036,782 + -1.0 3,036,782 + -0.4 3,036,819 - +0.0 3,036,838 + +1.1 3,036,843 + -0.2 3,036,844 - -1.3 3,036,846 + -0.7 3,036,846 + -2.5 3,036,847 - -0.4 3,036,847 - -1.2 3,036,855 + +1.3 3,036,974 - +0.1 3,037,027 + Echvi_2560 0.21 -1.1 3,037,028 - Echvi_2560 0.22 +0.4 3,037,040 + Echvi_2560 0.25 +0.1 3,037,068 - Echvi_2560 0.32 -0.4 3,037,068 - Echvi_2560 0.32 +0.5 3,037,068 - Echvi_2560 0.32 +0.9 3,037,102 + Echvi_2560 0.40 +0.1 3,037,137 - Echvi_2560 0.49 +0.3 3,037,212 + Echvi_2560 0.68 -1.0 3,037,232 - Echvi_2560 0.74 -1.2 3,037,249 - Echvi_2560 0.78 +0.8 3,037,256 + Echvi_2560 0.80 +0.6 3,037,256 + Echvi_2560 0.80 +0.4 3,037,256 + Echvi_2560 0.80 +1.1 3,037,257 - Echvi_2560 0.80 +0.7 3,037,288 - Echvi_2560 0.88 +0.0 3,037,309 - -0.6 3,037,309 - +1.8 3,037,356 - +1.5 3,037,398 - Echvi_2561 0.17 +0.0 3,037,403 - Echvi_2561 0.18 -1.0 3,037,411 - Echvi_2561 0.20 +0.8 3,037,430 + Echvi_2561 0.25 +0.2 3,037,431 - Echvi_2561 0.25 -0.4 3,037,431 - Echvi_2561 0.25 +0.2 3,037,482 - Echvi_2561 0.38 +1.2 3,037,505 - Echvi_2561 0.44 +1.0 3,037,573 + Echvi_2561 0.61 +0.3 3,037,581 - Echvi_2561 0.63 -0.7 3,037,599 - Echvi_2561 0.68 -0.2 3,037,613 + Echvi_2561 0.72 -0.2 3,037,614 - Echvi_2561 0.72 +0.6 3,037,615 + Echvi_2561 0.72 -1.6 3,037,616 - Echvi_2561 0.72 -0.2 3,037,616 - Echvi_2561 0.72 -0.8 3,037,670 + Echvi_2561 0.86 +0.5 3,037,709 + -0.7 3,037,710 - +0.2 3,037,759 - -1.8 3,037,922 - +0.0 3,037,923 + -0.8 3,037,926 + Echvi_2562 0.10 +0.1 3,037,926 + Echvi_2562 0.10 -1.7 3,037,967 - Echvi_2562 0.13 +1.4 3,037,982 + Echvi_2562 0.14 +0.8 3,037,983 - Echvi_2562 0.14 +0.4 3,037,985 + Echvi_2562 0.14 -1.2 3,037,986 - Echvi_2562 0.14 -0.7 3,038,009 + Echvi_2562 0.16 +0.1 3,038,127 - Echvi_2562 0.24 -1.3 3,038,298 + Echvi_2562 0.36 +0.1 3,038,298 + Echvi_2562 0.36 +0.5 3,038,330 + Echvi_2562 0.39 +0.4 3,038,331 - Echvi_2562 0.39 -1.1
Or see this region's nucleotide sequence