Experiment: m.b. Thallium(I) acetate 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2441 and Echvi_2442 are separated by 50 nucleotides Echvi_2442 and Echvi_2443 overlap by 4 nucleotides Echvi_2443 and Echvi_2444 are separated by 27 nucleotides
Echvi_2441: Echvi_2441 - Methylmalonyl-CoA mutase, N-terminal domain/subunit, at 2,897,257 to 2,900,634
_2441
Echvi_2442: Echvi_2442 - Predicted redox protein, regulator of disulfide bond formation, at 2,900,685 to 2,901,098
_2442
Echvi_2443: Echvi_2443 - hypothetical protein, at 2,901,095 to 2,901,334
_2443
Echvi_2444: Echvi_2444 - Predicted cysteine protease (OTU family), at 2,901,362 to 2,902,372
_2444
Position (kb)
2901
2902 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2900.130 kb on + strand, within Echvi_2441 at 2900.178 kb on + strand, within Echvi_2441 at 2900.178 kb on + strand, within Echvi_2441 at 2900.178 kb on + strand, within Echvi_2441 at 2900.218 kb on + strand, within Echvi_2441 at 2900.219 kb on - strand, within Echvi_2441 at 2900.295 kb on - strand, within Echvi_2441 at 2900.295 kb on - strand, within Echvi_2441 at 2900.309 kb on + strand at 2900.310 kb on - strand at 2900.314 kb on + strand at 2900.338 kb on - strand at 2900.342 kb on - strand at 2900.351 kb on + strand at 2900.361 kb on + strand at 2900.361 kb on + strand at 2900.412 kb on + strand at 2900.523 kb on + strand at 2900.523 kb on + strand at 2900.550 kb on + strand at 2900.551 kb on - strand at 2900.551 kb on - strand at 2900.586 kb on + strand at 2900.633 kb on - strand at 2900.658 kb on + strand at 2900.659 kb on - strand at 2900.667 kb on + strand at 2900.731 kb on - strand, within Echvi_2442 at 2900.767 kb on + strand, within Echvi_2442 at 2900.767 kb on + strand, within Echvi_2442 at 2900.767 kb on + strand, within Echvi_2442 at 2900.768 kb on - strand, within Echvi_2442 at 2900.768 kb on - strand, within Echvi_2442 at 2900.771 kb on + strand, within Echvi_2442 at 2900.771 kb on + strand, within Echvi_2442 at 2900.771 kb on + strand, within Echvi_2442 at 2900.771 kb on + strand, within Echvi_2442 at 2900.771 kb on + strand, within Echvi_2442 at 2900.771 kb on + strand, within Echvi_2442 at 2900.771 kb on + strand, within Echvi_2442 at 2900.771 kb on + strand, within Echvi_2442 at 2900.771 kb on + strand, within Echvi_2442 at 2900.771 kb on + strand, within Echvi_2442 at 2900.771 kb on + strand, within Echvi_2442 at 2900.771 kb on + strand, within Echvi_2442 at 2900.771 kb on + strand, within Echvi_2442 at 2900.772 kb on - strand, within Echvi_2442 at 2900.772 kb on - strand, within Echvi_2442 at 2900.772 kb on - strand, within Echvi_2442 at 2900.775 kb on + strand, within Echvi_2442 at 2900.775 kb on + strand, within Echvi_2442 at 2900.775 kb on + strand, within Echvi_2442 at 2900.775 kb on + strand, within Echvi_2442 at 2900.775 kb on + strand, within Echvi_2442 at 2900.775 kb on + strand, within Echvi_2442 at 2900.775 kb on + strand, within Echvi_2442 at 2900.775 kb on + strand, within Echvi_2442 at 2900.775 kb on + strand, within Echvi_2442 at 2900.775 kb on + strand, within Echvi_2442 at 2900.775 kb on + strand, within Echvi_2442 at 2900.776 kb on - strand, within Echvi_2442 at 2900.776 kb on - strand, within Echvi_2442 at 2900.776 kb on - strand, within Echvi_2442 at 2900.807 kb on + strand, within Echvi_2442 at 2900.807 kb on + strand, within Echvi_2442 at 2900.807 kb on + strand, within Echvi_2442 at 2900.819 kb on - strand, within Echvi_2442 at 2900.848 kb on + strand, within Echvi_2442 at 2900.848 kb on + strand, within Echvi_2442 at 2900.897 kb on + strand, within Echvi_2442 at 2900.898 kb on - strand, within Echvi_2442 at 2900.902 kb on + strand, within Echvi_2442 at 2900.903 kb on - strand, within Echvi_2442 at 2900.943 kb on + strand, within Echvi_2442 at 2900.943 kb on + strand, within Echvi_2442 at 2900.943 kb on + strand, within Echvi_2442 at 2900.944 kb on - strand, within Echvi_2442 at 2900.944 kb on - strand, within Echvi_2442 at 2900.945 kb on + strand, within Echvi_2442 at 2900.945 kb on + strand, within Echvi_2442 at 2900.946 kb on - strand, within Echvi_2442 at 2901.029 kb on + strand, within Echvi_2442 at 2901.029 kb on + strand, within Echvi_2442 at 2901.029 kb on + strand, within Echvi_2442 at 2901.033 kb on + strand, within Echvi_2442 at 2901.033 kb on + strand, within Echvi_2442 at 2901.033 kb on + strand, within Echvi_2442 at 2901.033 kb on + strand, within Echvi_2442 at 2901.033 kb on + strand, within Echvi_2442 at 2901.033 kb on + strand, within Echvi_2442 at 2901.034 kb on - strand, within Echvi_2442 at 2901.034 kb on - strand, within Echvi_2442 at 2901.072 kb on + strand at 2901.073 kb on - strand at 2901.075 kb on - strand at 2901.161 kb on + strand, within Echvi_2443 at 2901.162 kb on - strand, within Echvi_2443 at 2901.162 kb on - strand, within Echvi_2443 at 2901.162 kb on - strand, within Echvi_2443 at 2901.173 kb on + strand, within Echvi_2443 at 2901.174 kb on - strand, within Echvi_2443 at 2901.200 kb on + strand, within Echvi_2443 at 2901.201 kb on - strand, within Echvi_2443 at 2901.329 kb on - strand at 2901.353 kb on + strand at 2901.353 kb on + strand at 2901.360 kb on - strand at 2901.368 kb on + strand at 2901.368 kb on + strand at 2901.374 kb on + strand at 2901.409 kb on + strand at 2901.418 kb on + strand at 2901.418 kb on + strand at 2901.438 kb on + strand at 2901.439 kb on - strand at 2901.439 kb on - strand at 2901.439 kb on - strand at 2901.439 kb on - strand at 2901.440 kb on + strand at 2901.440 kb on + strand at 2901.440 kb on + strand at 2901.441 kb on - strand at 2901.441 kb on - strand at 2901.442 kb on + strand at 2901.442 kb on + strand at 2901.442 kb on + strand at 2901.442 kb on + strand at 2901.442 kb on + strand at 2901.442 kb on + strand at 2901.442 kb on + strand at 2901.442 kb on + strand at 2901.442 kb on + strand at 2901.443 kb on - strand at 2901.445 kb on + strand at 2901.446 kb on - strand at 2901.469 kb on + strand, within Echvi_2444 at 2901.469 kb on + strand, within Echvi_2444 at 2901.542 kb on + strand, within Echvi_2444 at 2901.566 kb on + strand, within Echvi_2444 at 2901.567 kb on - strand, within Echvi_2444 at 2901.618 kb on + strand, within Echvi_2444 at 2901.618 kb on + strand, within Echvi_2444 at 2901.620 kb on + strand, within Echvi_2444 at 2901.621 kb on - strand, within Echvi_2444 at 2901.649 kb on + strand, within Echvi_2444 at 2901.649 kb on + strand, within Echvi_2444 at 2901.650 kb on - strand, within Echvi_2444 at 2901.650 kb on - strand, within Echvi_2444 at 2901.650 kb on - strand, within Echvi_2444 at 2901.667 kb on + strand, within Echvi_2444 at 2901.667 kb on + strand, within Echvi_2444 at 2901.667 kb on + strand, within Echvi_2444 at 2901.704 kb on + strand, within Echvi_2444 at 2901.705 kb on - strand, within Echvi_2444 at 2901.743 kb on + strand, within Echvi_2444 at 2901.743 kb on + strand, within Echvi_2444 at 2901.779 kb on - strand, within Echvi_2444 at 2901.795 kb on + strand, within Echvi_2444 at 2901.795 kb on + strand, within Echvi_2444 at 2901.796 kb on - strand, within Echvi_2444 at 2901.799 kb on + strand, within Echvi_2444 at 2901.853 kb on + strand, within Echvi_2444 at 2901.853 kb on + strand, within Echvi_2444 at 2901.925 kb on + strand, within Echvi_2444 at 2901.925 kb on + strand, within Echvi_2444 at 2901.925 kb on + strand, within Echvi_2444 at 2901.926 kb on - strand, within Echvi_2444 at 2901.929 kb on + strand, within Echvi_2444 at 2901.996 kb on + strand, within Echvi_2444 at 2902.026 kb on + strand, within Echvi_2444 at 2902.079 kb on - strand, within Echvi_2444 at 2902.080 kb on + strand, within Echvi_2444 at 2902.080 kb on + strand, within Echvi_2444 at 2902.080 kb on + strand, within Echvi_2444 at 2902.080 kb on + strand, within Echvi_2444 at 2902.131 kb on + strand, within Echvi_2444 at 2902.161 kb on - strand, within Echvi_2444 at 2902.209 kb on + strand, within Echvi_2444 at 2902.210 kb on - strand, within Echvi_2444 at 2902.213 kb on + strand, within Echvi_2444 at 2902.214 kb on - strand, within Echvi_2444 at 2902.277 kb on + strand at 2902.310 kb on + strand at 2902.310 kb on + strand at 2902.311 kb on - strand at 2902.319 kb on + strand at 2902.319 kb on + strand at 2902.324 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.025 mg/ml remove 2,900,130 + Echvi_2441 0.85 -0.0 2,900,178 + Echvi_2441 0.86 +0.5 2,900,178 + Echvi_2441 0.86 +0.6 2,900,178 + Echvi_2441 0.86 +0.2 2,900,218 + Echvi_2441 0.88 +0.4 2,900,219 - Echvi_2441 0.88 -1.3 2,900,295 - Echvi_2441 0.90 +1.7 2,900,295 - Echvi_2441 0.90 +0.9 2,900,309 + -0.4 2,900,310 - -1.8 2,900,314 + -1.1 2,900,338 - -0.3 2,900,342 - +1.3 2,900,351 + -0.1 2,900,361 + -1.8 2,900,361 + +0.4 2,900,412 + +0.8 2,900,523 + -0.1 2,900,523 + -0.2 2,900,550 + +1.3 2,900,551 - +0.0 2,900,551 - +0.1 2,900,586 + -0.6 2,900,633 - +0.1 2,900,658 + +0.3 2,900,659 - +2.4 2,900,667 + +0.3 2,900,731 - Echvi_2442 0.11 -0.9 2,900,767 + Echvi_2442 0.20 -0.5 2,900,767 + Echvi_2442 0.20 +0.7 2,900,767 + Echvi_2442 0.20 -0.2 2,900,768 - Echvi_2442 0.20 +1.1 2,900,768 - Echvi_2442 0.20 +0.4 2,900,771 + Echvi_2442 0.21 -0.6 2,900,771 + Echvi_2442 0.21 -2.3 2,900,771 + Echvi_2442 0.21 -1.6 2,900,771 + Echvi_2442 0.21 +0.0 2,900,771 + Echvi_2442 0.21 -1.3 2,900,771 + Echvi_2442 0.21 +0.1 2,900,771 + Echvi_2442 0.21 +0.4 2,900,771 + Echvi_2442 0.21 +0.7 2,900,771 + Echvi_2442 0.21 -0.6 2,900,771 + Echvi_2442 0.21 +0.1 2,900,771 + Echvi_2442 0.21 -1.0 2,900,771 + Echvi_2442 0.21 +0.0 2,900,771 + Echvi_2442 0.21 -0.4 2,900,772 - Echvi_2442 0.21 -0.6 2,900,772 - Echvi_2442 0.21 +1.9 2,900,772 - Echvi_2442 0.21 -0.1 2,900,775 + Echvi_2442 0.22 +0.0 2,900,775 + Echvi_2442 0.22 +1.4 2,900,775 + Echvi_2442 0.22 -0.1 2,900,775 + Echvi_2442 0.22 -1.3 2,900,775 + Echvi_2442 0.22 -0.8 2,900,775 + Echvi_2442 0.22 -0.5 2,900,775 + Echvi_2442 0.22 -0.2 2,900,775 + Echvi_2442 0.22 -0.4 2,900,775 + Echvi_2442 0.22 +0.3 2,900,775 + Echvi_2442 0.22 -0.9 2,900,775 + Echvi_2442 0.22 -0.5 2,900,776 - Echvi_2442 0.22 -0.5 2,900,776 - Echvi_2442 0.22 +0.6 2,900,776 - Echvi_2442 0.22 -1.3 2,900,807 + Echvi_2442 0.29 +0.7 2,900,807 + Echvi_2442 0.29 -1.3 2,900,807 + Echvi_2442 0.29 +0.9 2,900,819 - Echvi_2442 0.32 +0.7 2,900,848 + Echvi_2442 0.39 -1.5 2,900,848 + Echvi_2442 0.39 -2.4 2,900,897 + Echvi_2442 0.51 -2.0 2,900,898 - Echvi_2442 0.51 -0.2 2,900,902 + Echvi_2442 0.52 -0.6 2,900,903 - Echvi_2442 0.53 +0.1 2,900,943 + Echvi_2442 0.62 -0.3 2,900,943 + Echvi_2442 0.62 -0.2 2,900,943 + Echvi_2442 0.62 -0.6 2,900,944 - Echvi_2442 0.63 -0.5 2,900,944 - Echvi_2442 0.63 -0.1 2,900,945 + Echvi_2442 0.63 -1.1 2,900,945 + Echvi_2442 0.63 +1.5 2,900,946 - Echvi_2442 0.63 -0.9 2,901,029 + Echvi_2442 0.83 -1.0 2,901,029 + Echvi_2442 0.83 -1.2 2,901,029 + Echvi_2442 0.83 +0.6 2,901,033 + Echvi_2442 0.84 +0.2 2,901,033 + Echvi_2442 0.84 -1.5 2,901,033 + Echvi_2442 0.84 -0.8 2,901,033 + Echvi_2442 0.84 +0.3 2,901,033 + Echvi_2442 0.84 -1.0 2,901,033 + Echvi_2442 0.84 -0.6 2,901,034 - Echvi_2442 0.84 +0.9 2,901,034 - Echvi_2442 0.84 -1.2 2,901,072 + -0.5 2,901,073 - -0.8 2,901,075 - +0.4 2,901,161 + Echvi_2443 0.28 +0.7 2,901,162 - Echvi_2443 0.28 -0.2 2,901,162 - Echvi_2443 0.28 -2.9 2,901,162 - Echvi_2443 0.28 +0.0 2,901,173 + Echvi_2443 0.33 +0.2 2,901,174 - Echvi_2443 0.33 -2.7 2,901,200 + Echvi_2443 0.44 -1.0 2,901,201 - Echvi_2443 0.44 -0.6 2,901,329 - -1.2 2,901,353 + -0.4 2,901,353 + -0.1 2,901,360 - -1.1 2,901,368 + -0.6 2,901,368 + -0.2 2,901,374 + -0.4 2,901,409 + -0.2 2,901,418 + +0.6 2,901,418 + -0.5 2,901,438 + -0.4 2,901,439 - +0.6 2,901,439 - -1.2 2,901,439 - -1.6 2,901,439 - +0.6 2,901,440 + +0.2 2,901,440 + +0.1 2,901,440 + +0.1 2,901,441 - +2.2 2,901,441 - +0.9 2,901,442 + +0.1 2,901,442 + +0.0 2,901,442 + -0.2 2,901,442 + -0.8 2,901,442 + -0.7 2,901,442 + -0.1 2,901,442 + +0.7 2,901,442 + +0.0 2,901,442 + -1.9 2,901,443 - +0.2 2,901,445 + +0.1 2,901,446 - -1.6 2,901,469 + Echvi_2444 0.11 -0.7 2,901,469 + Echvi_2444 0.11 +0.4 2,901,542 + Echvi_2444 0.18 +0.4 2,901,566 + Echvi_2444 0.20 +0.3 2,901,567 - Echvi_2444 0.20 +1.2 2,901,618 + Echvi_2444 0.25 +0.6 2,901,618 + Echvi_2444 0.25 -0.2 2,901,620 + Echvi_2444 0.26 -0.0 2,901,621 - Echvi_2444 0.26 +1.4 2,901,649 + Echvi_2444 0.28 +0.2 2,901,649 + Echvi_2444 0.28 +0.1 2,901,650 - Echvi_2444 0.28 -1.1 2,901,650 - Echvi_2444 0.28 -0.1 2,901,650 - Echvi_2444 0.28 -1.2 2,901,667 + Echvi_2444 0.30 +0.8 2,901,667 + Echvi_2444 0.30 +0.1 2,901,667 + Echvi_2444 0.30 -0.2 2,901,704 + Echvi_2444 0.34 -0.0 2,901,705 - Echvi_2444 0.34 +0.2 2,901,743 + Echvi_2444 0.38 -0.3 2,901,743 + Echvi_2444 0.38 +0.3 2,901,779 - Echvi_2444 0.41 -0.7 2,901,795 + Echvi_2444 0.43 +1.6 2,901,795 + Echvi_2444 0.43 -0.0 2,901,796 - Echvi_2444 0.43 -1.3 2,901,799 + Echvi_2444 0.43 -1.1 2,901,853 + Echvi_2444 0.49 -0.1 2,901,853 + Echvi_2444 0.49 +0.7 2,901,925 + Echvi_2444 0.56 +1.1 2,901,925 + Echvi_2444 0.56 -0.3 2,901,925 + Echvi_2444 0.56 +0.1 2,901,926 - Echvi_2444 0.56 +0.9 2,901,929 + Echvi_2444 0.56 +0.3 2,901,996 + Echvi_2444 0.63 +0.6 2,902,026 + Echvi_2444 0.66 -0.6 2,902,079 - Echvi_2444 0.71 -0.7 2,902,080 + Echvi_2444 0.71 -0.2 2,902,080 + Echvi_2444 0.71 +0.1 2,902,080 + Echvi_2444 0.71 +0.5 2,902,080 + Echvi_2444 0.71 -0.1 2,902,131 + Echvi_2444 0.76 +1.0 2,902,161 - Echvi_2444 0.79 +0.2 2,902,209 + Echvi_2444 0.84 +0.9 2,902,210 - Echvi_2444 0.84 -1.3 2,902,213 + Echvi_2444 0.84 +0.4 2,902,214 - Echvi_2444 0.84 -0.2 2,902,277 + -0.9 2,902,310 + -0.3 2,902,310 + +1.0 2,902,311 - -2.4 2,902,319 + +0.7 2,902,319 + +0.2 2,902,324 + +0.2
Or see this region's nucleotide sequence