Experiment: m.b. Thallium(I) acetate 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1867 and Echvi_1868 are separated by 53 nucleotides Echvi_1868 and Echvi_1869 are separated by 22 nucleotides Echvi_1869 and Echvi_1870 are separated by 154 nucleotides
Echvi_1867: Echvi_1867 - SusD family., at 2,190,084 to 2,191,994
_1867
Echvi_1868: Echvi_1868 - hypothetical protein, at 2,192,048 to 2,192,284
_1868
Echvi_1869: Echvi_1869 - mannonate dehydratase, at 2,192,307 to 2,193,470
_1869
Echvi_1870: Echvi_1870 - hypothetical protein, at 2,193,625 to 2,196,543
_1870
Position (kb)
2192
2193
2194 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2191.311 kb on - strand, within Echvi_1867 at 2191.316 kb on + strand, within Echvi_1867 at 2191.317 kb on - strand, within Echvi_1867 at 2191.317 kb on - strand, within Echvi_1867 at 2191.317 kb on - strand, within Echvi_1867 at 2191.354 kb on - strand, within Echvi_1867 at 2191.354 kb on - strand, within Echvi_1867 at 2191.453 kb on - strand, within Echvi_1867 at 2191.463 kb on - strand, within Echvi_1867 at 2191.479 kb on + strand, within Echvi_1867 at 2191.539 kb on - strand, within Echvi_1867 at 2191.564 kb on - strand, within Echvi_1867 at 2191.599 kb on - strand, within Echvi_1867 at 2191.625 kb on + strand, within Echvi_1867 at 2191.628 kb on + strand, within Echvi_1867 at 2191.628 kb on + strand, within Echvi_1867 at 2191.628 kb on + strand, within Echvi_1867 at 2191.629 kb on - strand, within Echvi_1867 at 2191.668 kb on - strand, within Echvi_1867 at 2191.668 kb on - strand, within Echvi_1867 at 2191.670 kb on + strand, within Echvi_1867 at 2191.699 kb on - strand, within Echvi_1867 at 2191.700 kb on + strand, within Echvi_1867 at 2191.700 kb on + strand, within Echvi_1867 at 2191.700 kb on + strand, within Echvi_1867 at 2191.701 kb on - strand, within Echvi_1867 at 2191.701 kb on - strand, within Echvi_1867 at 2191.742 kb on + strand, within Echvi_1867 at 2191.742 kb on + strand, within Echvi_1867 at 2191.742 kb on + strand, within Echvi_1867 at 2191.743 kb on - strand, within Echvi_1867 at 2191.746 kb on + strand, within Echvi_1867 at 2191.746 kb on + strand, within Echvi_1867 at 2191.746 kb on + strand, within Echvi_1867 at 2191.747 kb on - strand, within Echvi_1867 at 2191.747 kb on - strand, within Echvi_1867 at 2191.747 kb on - strand, within Echvi_1867 at 2191.747 kb on - strand, within Echvi_1867 at 2191.747 kb on - strand, within Echvi_1867 at 2191.751 kb on - strand, within Echvi_1867 at 2191.751 kb on - strand, within Echvi_1867 at 2191.850 kb on - strand at 2191.859 kb on + strand at 2191.860 kb on - strand at 2191.874 kb on + strand at 2191.874 kb on + strand at 2191.875 kb on - strand at 2191.875 kb on - strand at 2191.875 kb on - strand at 2191.895 kb on + strand at 2191.895 kb on + strand at 2191.900 kb on + strand at 2191.900 kb on + strand at 2191.901 kb on - strand at 2191.901 kb on - strand at 2191.901 kb on - strand at 2191.925 kb on + strand at 2191.926 kb on - strand at 2191.962 kb on - strand at 2191.965 kb on - strand at 2191.965 kb on - strand at 2191.965 kb on - strand at 2191.971 kb on + strand at 2192.083 kb on + strand, within Echvi_1868 at 2192.083 kb on + strand, within Echvi_1868 at 2192.084 kb on - strand, within Echvi_1868 at 2192.142 kb on - strand, within Echvi_1868 at 2192.145 kb on - strand, within Echvi_1868 at 2192.145 kb on - strand, within Echvi_1868 at 2192.145 kb on - strand, within Echvi_1868 at 2192.145 kb on - strand, within Echvi_1868 at 2192.162 kb on + strand, within Echvi_1868 at 2192.164 kb on + strand, within Echvi_1868 at 2192.164 kb on + strand, within Echvi_1868 at 2192.164 kb on + strand, within Echvi_1868 at 2192.164 kb on + strand, within Echvi_1868 at 2192.164 kb on + strand, within Echvi_1868 at 2192.164 kb on + strand, within Echvi_1868 at 2192.164 kb on + strand, within Echvi_1868 at 2192.164 kb on + strand, within Echvi_1868 at 2192.165 kb on - strand, within Echvi_1868 at 2192.165 kb on - strand, within Echvi_1868 at 2192.165 kb on - strand, within Echvi_1868 at 2192.165 kb on - strand, within Echvi_1868 at 2192.165 kb on - strand, within Echvi_1868 at 2192.165 kb on - strand, within Echvi_1868 at 2192.165 kb on - strand, within Echvi_1868 at 2192.165 kb on - strand, within Echvi_1868 at 2192.165 kb on - strand, within Echvi_1868 at 2192.167 kb on - strand, within Echvi_1868 at 2192.177 kb on - strand, within Echvi_1868 at 2192.240 kb on - strand, within Echvi_1868 at 2192.268 kb on - strand at 2192.303 kb on - strand at 2192.553 kb on + strand, within Echvi_1869 at 2192.591 kb on + strand, within Echvi_1869 at 2192.603 kb on - strand, within Echvi_1869 at 2192.616 kb on + strand, within Echvi_1869 at 2192.761 kb on - strand, within Echvi_1869 at 2192.804 kb on + strand, within Echvi_1869 at 2192.804 kb on + strand, within Echvi_1869 at 2192.839 kb on + strand, within Echvi_1869 at 2192.840 kb on - strand, within Echvi_1869 at 2192.897 kb on + strand, within Echvi_1869 at 2192.898 kb on - strand, within Echvi_1869 at 2192.906 kb on - strand, within Echvi_1869 at 2192.906 kb on - strand, within Echvi_1869 at 2192.963 kb on + strand, within Echvi_1869 at 2193.034 kb on + strand, within Echvi_1869 at 2193.034 kb on + strand, within Echvi_1869 at 2193.035 kb on - strand, within Echvi_1869 at 2193.150 kb on - strand, within Echvi_1869 at 2193.150 kb on - strand, within Echvi_1869 at 2193.306 kb on - strand, within Echvi_1869 at 2193.306 kb on - strand, within Echvi_1869 at 2193.306 kb on - strand, within Echvi_1869 at 2193.452 kb on - strand at 2193.472 kb on + strand at 2193.715 kb on - strand at 2193.734 kb on + strand at 2193.735 kb on - strand at 2193.735 kb on - strand at 2193.873 kb on - strand at 2193.938 kb on + strand, within Echvi_1870 at 2193.976 kb on - strand, within Echvi_1870 at 2194.002 kb on - strand, within Echvi_1870 at 2194.002 kb on - strand, within Echvi_1870 at 2194.174 kb on + strand, within Echvi_1870 at 2194.174 kb on + strand, within Echvi_1870 at 2194.174 kb on + strand, within Echvi_1870 at 2194.174 kb on + strand, within Echvi_1870 at 2194.175 kb on - strand, within Echvi_1870 at 2194.175 kb on - strand, within Echvi_1870 at 2194.175 kb on - strand, within Echvi_1870 at 2194.175 kb on - strand, within Echvi_1870 at 2194.175 kb on - strand, within Echvi_1870 at 2194.175 kb on - strand, within Echvi_1870 at 2194.175 kb on - strand, within Echvi_1870 at 2194.175 kb on - strand, within Echvi_1870 at 2194.175 kb on - strand, within Echvi_1870 at 2194.175 kb on - strand, within Echvi_1870 at 2194.175 kb on - strand, within Echvi_1870 at 2194.175 kb on - strand, within Echvi_1870 at 2194.175 kb on - strand, within Echvi_1870 at 2194.219 kb on + strand, within Echvi_1870 at 2194.300 kb on - strand, within Echvi_1870 at 2194.359 kb on + strand, within Echvi_1870 at 2194.360 kb on - strand, within Echvi_1870 at 2194.437 kb on + strand, within Echvi_1870 at 2194.438 kb on - strand, within Echvi_1870
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.025 mg/ml remove 2,191,311 - Echvi_1867 0.64 -0.5 2,191,316 + Echvi_1867 0.64 +0.2 2,191,317 - Echvi_1867 0.65 -0.1 2,191,317 - Echvi_1867 0.65 -1.3 2,191,317 - Echvi_1867 0.65 +0.8 2,191,354 - Echvi_1867 0.66 -2.8 2,191,354 - Echvi_1867 0.66 -0.6 2,191,453 - Echvi_1867 0.72 -0.4 2,191,463 - Echvi_1867 0.72 +0.6 2,191,479 + Echvi_1867 0.73 -1.2 2,191,539 - Echvi_1867 0.76 -1.5 2,191,564 - Echvi_1867 0.77 -0.8 2,191,599 - Echvi_1867 0.79 -0.2 2,191,625 + Echvi_1867 0.81 +0.4 2,191,628 + Echvi_1867 0.81 +1.5 2,191,628 + Echvi_1867 0.81 -0.9 2,191,628 + Echvi_1867 0.81 +0.8 2,191,629 - Echvi_1867 0.81 +0.5 2,191,668 - Echvi_1867 0.83 +0.3 2,191,668 - Echvi_1867 0.83 -0.8 2,191,670 + Echvi_1867 0.83 +0.1 2,191,699 - Echvi_1867 0.85 -0.2 2,191,700 + Echvi_1867 0.85 -1.8 2,191,700 + Echvi_1867 0.85 -0.6 2,191,700 + Echvi_1867 0.85 +0.5 2,191,701 - Echvi_1867 0.85 -2.9 2,191,701 - Echvi_1867 0.85 -0.2 2,191,742 + Echvi_1867 0.87 -1.7 2,191,742 + Echvi_1867 0.87 +0.7 2,191,742 + Echvi_1867 0.87 -1.5 2,191,743 - Echvi_1867 0.87 +0.8 2,191,746 + Echvi_1867 0.87 +0.2 2,191,746 + Echvi_1867 0.87 -1.4 2,191,746 + Echvi_1867 0.87 -0.9 2,191,747 - Echvi_1867 0.87 +0.2 2,191,747 - Echvi_1867 0.87 -0.5 2,191,747 - Echvi_1867 0.87 +0.8 2,191,747 - Echvi_1867 0.87 -1.5 2,191,747 - Echvi_1867 0.87 +0.7 2,191,751 - Echvi_1867 0.87 -0.3 2,191,751 - Echvi_1867 0.87 +0.3 2,191,850 - +1.8 2,191,859 + +0.3 2,191,860 - +0.5 2,191,874 + +0.7 2,191,874 + -1.3 2,191,875 - -0.1 2,191,875 - -1.4 2,191,875 - +0.4 2,191,895 + -1.3 2,191,895 + -0.5 2,191,900 + +0.3 2,191,900 + -0.0 2,191,901 - -0.7 2,191,901 - -0.2 2,191,901 - +0.0 2,191,925 + -0.3 2,191,926 - +1.2 2,191,962 - +0.9 2,191,965 - -0.3 2,191,965 - -0.2 2,191,965 - -0.1 2,191,971 + -0.1 2,192,083 + Echvi_1868 0.15 -0.0 2,192,083 + Echvi_1868 0.15 -0.9 2,192,084 - Echvi_1868 0.15 +0.5 2,192,142 - Echvi_1868 0.40 +1.1 2,192,145 - Echvi_1868 0.41 +0.4 2,192,145 - Echvi_1868 0.41 -0.2 2,192,145 - Echvi_1868 0.41 +0.7 2,192,145 - Echvi_1868 0.41 -0.3 2,192,162 + Echvi_1868 0.48 -0.1 2,192,164 + Echvi_1868 0.49 +1.1 2,192,164 + Echvi_1868 0.49 -1.6 2,192,164 + Echvi_1868 0.49 -1.2 2,192,164 + Echvi_1868 0.49 -0.8 2,192,164 + Echvi_1868 0.49 +1.0 2,192,164 + Echvi_1868 0.49 -0.6 2,192,164 + Echvi_1868 0.49 +0.5 2,192,164 + Echvi_1868 0.49 +0.8 2,192,165 - Echvi_1868 0.49 -0.5 2,192,165 - Echvi_1868 0.49 +0.8 2,192,165 - Echvi_1868 0.49 +0.2 2,192,165 - Echvi_1868 0.49 +0.6 2,192,165 - Echvi_1868 0.49 -0.7 2,192,165 - Echvi_1868 0.49 -0.9 2,192,165 - Echvi_1868 0.49 +0.2 2,192,165 - Echvi_1868 0.49 -1.4 2,192,165 - Echvi_1868 0.49 -1.0 2,192,167 - Echvi_1868 0.50 -1.1 2,192,177 - Echvi_1868 0.54 -0.8 2,192,240 - Echvi_1868 0.81 +1.2 2,192,268 - -0.7 2,192,303 - +0.7 2,192,553 + Echvi_1869 0.21 +1.9 2,192,591 + Echvi_1869 0.24 +1.1 2,192,603 - Echvi_1869 0.25 -0.4 2,192,616 + Echvi_1869 0.27 +1.4 2,192,761 - Echvi_1869 0.39 -0.0 2,192,804 + Echvi_1869 0.43 +1.9 2,192,804 + Echvi_1869 0.43 -1.6 2,192,839 + Echvi_1869 0.46 +0.3 2,192,840 - Echvi_1869 0.46 -0.1 2,192,897 + Echvi_1869 0.51 -0.2 2,192,898 - Echvi_1869 0.51 +0.4 2,192,906 - Echvi_1869 0.51 +0.7 2,192,906 - Echvi_1869 0.51 -0.2 2,192,963 + Echvi_1869 0.56 -0.4 2,193,034 + Echvi_1869 0.62 -0.2 2,193,034 + Echvi_1869 0.62 -0.0 2,193,035 - Echvi_1869 0.63 +0.4 2,193,150 - Echvi_1869 0.72 +0.5 2,193,150 - Echvi_1869 0.72 +0.6 2,193,306 - Echvi_1869 0.86 +0.8 2,193,306 - Echvi_1869 0.86 -0.4 2,193,306 - Echvi_1869 0.86 +1.4 2,193,452 - -2.5 2,193,472 + +1.2 2,193,715 - -0.7 2,193,734 + -1.1 2,193,735 - -0.8 2,193,735 - -0.6 2,193,873 - -0.9 2,193,938 + Echvi_1870 0.11 -1.2 2,193,976 - Echvi_1870 0.12 +0.9 2,194,002 - Echvi_1870 0.13 -0.3 2,194,002 - Echvi_1870 0.13 +0.1 2,194,174 + Echvi_1870 0.19 -0.5 2,194,174 + Echvi_1870 0.19 -1.2 2,194,174 + Echvi_1870 0.19 +2.2 2,194,174 + Echvi_1870 0.19 +0.6 2,194,175 - Echvi_1870 0.19 +0.3 2,194,175 - Echvi_1870 0.19 +0.8 2,194,175 - Echvi_1870 0.19 -0.8 2,194,175 - Echvi_1870 0.19 +0.7 2,194,175 - Echvi_1870 0.19 +1.2 2,194,175 - Echvi_1870 0.19 -0.8 2,194,175 - Echvi_1870 0.19 +0.5 2,194,175 - Echvi_1870 0.19 -0.1 2,194,175 - Echvi_1870 0.19 +0.4 2,194,175 - Echvi_1870 0.19 +0.4 2,194,175 - Echvi_1870 0.19 +1.5 2,194,175 - Echvi_1870 0.19 +0.2 2,194,175 - Echvi_1870 0.19 -0.2 2,194,219 + Echvi_1870 0.20 -0.4 2,194,300 - Echvi_1870 0.23 -0.3 2,194,359 + Echvi_1870 0.25 -0.0 2,194,360 - Echvi_1870 0.25 -0.7 2,194,437 + Echvi_1870 0.28 -0.8 2,194,438 - Echvi_1870 0.28 +1.1
Or see this region's nucleotide sequence