Experiment: m.b. Thallium(I) acetate 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1711 and Echvi_1712 are separated by 143 nucleotides Echvi_1712 and Echvi_1713 are separated by 2 nucleotides
Echvi_1711: Echvi_1711 - hypothetical protein, at 2,014,873 to 2,015,913
_1711
Echvi_1712: Echvi_1712 - RND family efflux transporter, MFP subunit, at 2,016,057 to 2,017,130
_1712
Echvi_1713: Echvi_1713 - Cation/multidrug efflux pump, at 2,017,133 to 2,020,180
_1713
Position (kb)
2016
2017
2018 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2015.083 kb on + strand, within Echvi_1711 at 2015.084 kb on - strand, within Echvi_1711 at 2015.087 kb on + strand, within Echvi_1711 at 2015.087 kb on + strand, within Echvi_1711 at 2015.088 kb on - strand, within Echvi_1711 at 2015.088 kb on - strand, within Echvi_1711 at 2015.088 kb on - strand, within Echvi_1711 at 2015.089 kb on + strand, within Echvi_1711 at 2015.089 kb on + strand, within Echvi_1711 at 2015.090 kb on - strand, within Echvi_1711 at 2015.090 kb on - strand, within Echvi_1711 at 2015.106 kb on - strand, within Echvi_1711 at 2015.110 kb on + strand, within Echvi_1711 at 2015.110 kb on + strand, within Echvi_1711 at 2015.110 kb on + strand, within Echvi_1711 at 2015.111 kb on - strand, within Echvi_1711 at 2015.153 kb on + strand, within Echvi_1711 at 2015.206 kb on + strand, within Echvi_1711 at 2015.207 kb on - strand, within Echvi_1711 at 2015.207 kb on - strand, within Echvi_1711 at 2015.207 kb on - strand, within Echvi_1711 at 2015.211 kb on + strand, within Echvi_1711 at 2015.233 kb on - strand, within Echvi_1711 at 2015.256 kb on + strand, within Echvi_1711 at 2015.257 kb on - strand, within Echvi_1711 at 2015.259 kb on + strand, within Echvi_1711 at 2015.259 kb on + strand, within Echvi_1711 at 2015.279 kb on + strand, within Echvi_1711 at 2015.380 kb on + strand, within Echvi_1711 at 2015.380 kb on + strand, within Echvi_1711 at 2015.383 kb on - strand, within Echvi_1711 at 2015.399 kb on + strand, within Echvi_1711 at 2015.402 kb on + strand, within Echvi_1711 at 2015.411 kb on - strand, within Echvi_1711 at 2015.415 kb on + strand, within Echvi_1711 at 2015.427 kb on + strand, within Echvi_1711 at 2015.427 kb on + strand, within Echvi_1711 at 2015.427 kb on + strand, within Echvi_1711 at 2015.427 kb on + strand, within Echvi_1711 at 2015.428 kb on - strand, within Echvi_1711 at 2015.428 kb on - strand, within Echvi_1711 at 2015.428 kb on - strand, within Echvi_1711 at 2015.455 kb on - strand, within Echvi_1711 at 2015.484 kb on - strand, within Echvi_1711 at 2015.536 kb on + strand, within Echvi_1711 at 2015.536 kb on + strand, within Echvi_1711 at 2015.537 kb on - strand, within Echvi_1711 at 2015.537 kb on - strand, within Echvi_1711 at 2015.538 kb on + strand, within Echvi_1711 at 2015.538 kb on + strand, within Echvi_1711 at 2015.538 kb on + strand, within Echvi_1711 at 2015.538 kb on + strand, within Echvi_1711 at 2015.538 kb on + strand, within Echvi_1711 at 2015.538 kb on + strand, within Echvi_1711 at 2015.539 kb on - strand, within Echvi_1711 at 2015.539 kb on - strand, within Echvi_1711 at 2015.540 kb on + strand, within Echvi_1711 at 2015.540 kb on + strand, within Echvi_1711 at 2015.540 kb on + strand, within Echvi_1711 at 2015.540 kb on + strand, within Echvi_1711 at 2015.540 kb on + strand, within Echvi_1711 at 2015.540 kb on + strand, within Echvi_1711 at 2015.541 kb on - strand, within Echvi_1711 at 2015.541 kb on - strand, within Echvi_1711 at 2015.541 kb on - strand, within Echvi_1711 at 2015.541 kb on - strand, within Echvi_1711 at 2015.541 kb on - strand, within Echvi_1711 at 2015.541 kb on - strand, within Echvi_1711 at 2015.541 kb on - strand, within Echvi_1711 at 2015.541 kb on - strand, within Echvi_1711 at 2015.543 kb on - strand, within Echvi_1711 at 2015.579 kb on + strand, within Echvi_1711 at 2015.622 kb on + strand, within Echvi_1711 at 2015.622 kb on + strand, within Echvi_1711 at 2015.622 kb on + strand, within Echvi_1711 at 2015.623 kb on - strand, within Echvi_1711 at 2015.648 kb on + strand, within Echvi_1711 at 2015.649 kb on - strand, within Echvi_1711 at 2015.658 kb on + strand, within Echvi_1711 at 2015.658 kb on + strand, within Echvi_1711 at 2015.659 kb on - strand, within Echvi_1711 at 2015.665 kb on + strand, within Echvi_1711 at 2015.665 kb on + strand, within Echvi_1711 at 2015.668 kb on + strand, within Echvi_1711 at 2015.669 kb on - strand, within Echvi_1711 at 2015.669 kb on - strand, within Echvi_1711 at 2015.670 kb on + strand, within Echvi_1711 at 2015.670 kb on + strand, within Echvi_1711 at 2015.671 kb on - strand, within Echvi_1711 at 2015.710 kb on + strand, within Echvi_1711 at 2015.710 kb on + strand, within Echvi_1711 at 2015.711 kb on - strand, within Echvi_1711 at 2015.738 kb on + strand, within Echvi_1711 at 2015.738 kb on + strand, within Echvi_1711 at 2015.739 kb on - strand, within Echvi_1711 at 2015.786 kb on + strand, within Echvi_1711 at 2015.889 kb on - strand at 2015.889 kb on - strand at 2015.892 kb on - strand at 2015.894 kb on + strand at 2015.895 kb on - strand at 2015.911 kb on + strand at 2015.911 kb on + strand at 2015.926 kb on - strand at 2015.939 kb on + strand at 2015.940 kb on - strand at 2015.940 kb on - strand at 2015.940 kb on - strand at 2015.940 kb on - strand at 2015.961 kb on - strand at 2016.040 kb on - strand at 2016.216 kb on + strand, within Echvi_1712 at 2016.242 kb on - strand, within Echvi_1712 at 2016.260 kb on - strand, within Echvi_1712 at 2016.260 kb on - strand, within Echvi_1712 at 2016.318 kb on + strand, within Echvi_1712 at 2016.318 kb on + strand, within Echvi_1712 at 2016.318 kb on + strand, within Echvi_1712 at 2016.319 kb on - strand, within Echvi_1712 at 2016.319 kb on - strand, within Echvi_1712 at 2016.319 kb on - strand, within Echvi_1712 at 2016.417 kb on + strand, within Echvi_1712 at 2016.417 kb on + strand, within Echvi_1712 at 2016.419 kb on + strand, within Echvi_1712 at 2016.420 kb on - strand, within Echvi_1712 at 2016.741 kb on + strand, within Echvi_1712 at 2016.742 kb on - strand, within Echvi_1712 at 2016.937 kb on - strand, within Echvi_1712 at 2016.993 kb on + strand, within Echvi_1712 at 2017.181 kb on - strand at 2017.181 kb on - strand at 2017.277 kb on + strand at 2017.277 kb on + strand at 2017.440 kb on - strand, within Echvi_1713 at 2017.941 kb on - strand, within Echvi_1713 at 2017.949 kb on + strand, within Echvi_1713
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.025 mg/ml remove 2,015,083 + Echvi_1711 0.20 -1.2 2,015,084 - Echvi_1711 0.20 -0.5 2,015,087 + Echvi_1711 0.21 +0.7 2,015,087 + Echvi_1711 0.21 -2.7 2,015,088 - Echvi_1711 0.21 +0.8 2,015,088 - Echvi_1711 0.21 -0.6 2,015,088 - Echvi_1711 0.21 +0.3 2,015,089 + Echvi_1711 0.21 +1.0 2,015,089 + Echvi_1711 0.21 -0.1 2,015,090 - Echvi_1711 0.21 +1.1 2,015,090 - Echvi_1711 0.21 +0.3 2,015,106 - Echvi_1711 0.22 +0.4 2,015,110 + Echvi_1711 0.23 +0.1 2,015,110 + Echvi_1711 0.23 -0.8 2,015,110 + Echvi_1711 0.23 -0.4 2,015,111 - Echvi_1711 0.23 -0.8 2,015,153 + Echvi_1711 0.27 +0.8 2,015,206 + Echvi_1711 0.32 +0.3 2,015,207 - Echvi_1711 0.32 +1.5 2,015,207 - Echvi_1711 0.32 -0.1 2,015,207 - Echvi_1711 0.32 +0.8 2,015,211 + Echvi_1711 0.32 +0.1 2,015,233 - Echvi_1711 0.35 +1.0 2,015,256 + Echvi_1711 0.37 -0.6 2,015,257 - Echvi_1711 0.37 +1.1 2,015,259 + Echvi_1711 0.37 -0.3 2,015,259 + Echvi_1711 0.37 -0.0 2,015,279 + Echvi_1711 0.39 +0.7 2,015,380 + Echvi_1711 0.49 +0.2 2,015,380 + Echvi_1711 0.49 +0.2 2,015,383 - Echvi_1711 0.49 +0.5 2,015,399 + Echvi_1711 0.51 -0.1 2,015,402 + Echvi_1711 0.51 -0.4 2,015,411 - Echvi_1711 0.52 +0.3 2,015,415 + Echvi_1711 0.52 -0.5 2,015,427 + Echvi_1711 0.53 +0.1 2,015,427 + Echvi_1711 0.53 +0.1 2,015,427 + Echvi_1711 0.53 -0.1 2,015,427 + Echvi_1711 0.53 -1.4 2,015,428 - Echvi_1711 0.53 +2.3 2,015,428 - Echvi_1711 0.53 +0.7 2,015,428 - Echvi_1711 0.53 +0.3 2,015,455 - Echvi_1711 0.56 -0.4 2,015,484 - Echvi_1711 0.59 +0.7 2,015,536 + Echvi_1711 0.64 -0.3 2,015,536 + Echvi_1711 0.64 +0.0 2,015,537 - Echvi_1711 0.64 +0.3 2,015,537 - Echvi_1711 0.64 -1.7 2,015,538 + Echvi_1711 0.64 -2.7 2,015,538 + Echvi_1711 0.64 +1.5 2,015,538 + Echvi_1711 0.64 +0.2 2,015,538 + Echvi_1711 0.64 +2.3 2,015,538 + Echvi_1711 0.64 -1.4 2,015,538 + Echvi_1711 0.64 +0.0 2,015,539 - Echvi_1711 0.64 +1.5 2,015,539 - Echvi_1711 0.64 -0.2 2,015,540 + Echvi_1711 0.64 +1.2 2,015,540 + Echvi_1711 0.64 +0.5 2,015,540 + Echvi_1711 0.64 -0.2 2,015,540 + Echvi_1711 0.64 -0.7 2,015,540 + Echvi_1711 0.64 +0.8 2,015,540 + Echvi_1711 0.64 +2.2 2,015,541 - Echvi_1711 0.64 +0.4 2,015,541 - Echvi_1711 0.64 +0.0 2,015,541 - Echvi_1711 0.64 +1.0 2,015,541 - Echvi_1711 0.64 +0.0 2,015,541 - Echvi_1711 0.64 -0.1 2,015,541 - Echvi_1711 0.64 -0.5 2,015,541 - Echvi_1711 0.64 -0.3 2,015,541 - Echvi_1711 0.64 -0.1 2,015,543 - Echvi_1711 0.64 -0.1 2,015,579 + Echvi_1711 0.68 +0.8 2,015,622 + Echvi_1711 0.72 -0.0 2,015,622 + Echvi_1711 0.72 +2.4 2,015,622 + Echvi_1711 0.72 -1.5 2,015,623 - Echvi_1711 0.72 -1.7 2,015,648 + Echvi_1711 0.74 -0.1 2,015,649 - Echvi_1711 0.75 -0.5 2,015,658 + Echvi_1711 0.75 -0.7 2,015,658 + Echvi_1711 0.75 -0.5 2,015,659 - Echvi_1711 0.76 +0.2 2,015,665 + Echvi_1711 0.76 -0.3 2,015,665 + Echvi_1711 0.76 -1.0 2,015,668 + Echvi_1711 0.76 +0.2 2,015,669 - Echvi_1711 0.76 -0.2 2,015,669 - Echvi_1711 0.76 +0.5 2,015,670 + Echvi_1711 0.77 -2.0 2,015,670 + Echvi_1711 0.77 -0.4 2,015,671 - Echvi_1711 0.77 +1.0 2,015,710 + Echvi_1711 0.80 +0.2 2,015,710 + Echvi_1711 0.80 -0.1 2,015,711 - Echvi_1711 0.80 -0.1 2,015,738 + Echvi_1711 0.83 -1.2 2,015,738 + Echvi_1711 0.83 -0.5 2,015,739 - Echvi_1711 0.83 +0.1 2,015,786 + Echvi_1711 0.88 -0.2 2,015,889 - +0.7 2,015,889 - +0.4 2,015,892 - -0.9 2,015,894 + +0.8 2,015,895 - +0.2 2,015,911 + +1.5 2,015,911 + -1.2 2,015,926 - -1.2 2,015,939 + -0.9 2,015,940 - +0.5 2,015,940 - +0.4 2,015,940 - +0.9 2,015,940 - +0.8 2,015,961 - +0.5 2,016,040 - -0.2 2,016,216 + Echvi_1712 0.15 +1.9 2,016,242 - Echvi_1712 0.17 +0.7 2,016,260 - Echvi_1712 0.19 +0.7 2,016,260 - Echvi_1712 0.19 -1.2 2,016,318 + Echvi_1712 0.24 +0.2 2,016,318 + Echvi_1712 0.24 +1.3 2,016,318 + Echvi_1712 0.24 +0.7 2,016,319 - Echvi_1712 0.24 -0.7 2,016,319 - Echvi_1712 0.24 +0.6 2,016,319 - Echvi_1712 0.24 -1.2 2,016,417 + Echvi_1712 0.34 +0.3 2,016,417 + Echvi_1712 0.34 -0.5 2,016,419 + Echvi_1712 0.34 +0.2 2,016,420 - Echvi_1712 0.34 -0.9 2,016,741 + Echvi_1712 0.64 -1.9 2,016,742 - Echvi_1712 0.64 +2.0 2,016,937 - Echvi_1712 0.82 -0.8 2,016,993 + Echvi_1712 0.87 +0.3 2,017,181 - -2.3 2,017,181 - +0.2 2,017,277 + +0.5 2,017,277 + +1.5 2,017,440 - Echvi_1713 0.10 -0.2 2,017,941 - Echvi_1713 0.27 -0.6 2,017,949 + Echvi_1713 0.27 -0.0
Or see this region's nucleotide sequence