Experiment: m.b. Thallium(I) acetate 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1545 and Echvi_1546 are separated by 30 nucleotides Echvi_1546 and Echvi_1547 are separated by 290 nucleotides
Echvi_1545: Echvi_1545 - alanine racemase, at 1,772,725 to 1,773,879
_1545
Echvi_1546: Echvi_1546 - amidohydrolase, at 1,773,910 to 1,775,043
_1546
Echvi_1547: Echvi_1547 - hypothetical protein, at 1,775,334 to 1,775,510
_1547
Position (kb)
1773
1774
1775
1776 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1772.954 kb on - strand, within Echvi_1545 at 1772.996 kb on + strand, within Echvi_1545 at 1773.001 kb on + strand, within Echvi_1545 at 1773.170 kb on + strand, within Echvi_1545 at 1773.170 kb on + strand, within Echvi_1545 at 1773.170 kb on + strand, within Echvi_1545 at 1773.170 kb on + strand, within Echvi_1545 at 1773.170 kb on + strand, within Echvi_1545 at 1773.171 kb on - strand, within Echvi_1545 at 1773.171 kb on - strand, within Echvi_1545 at 1773.171 kb on - strand, within Echvi_1545 at 1773.197 kb on + strand, within Echvi_1545 at 1773.198 kb on - strand, within Echvi_1545 at 1773.247 kb on + strand, within Echvi_1545 at 1773.248 kb on - strand, within Echvi_1545 at 1773.402 kb on + strand, within Echvi_1545 at 1773.403 kb on - strand, within Echvi_1545 at 1773.428 kb on + strand, within Echvi_1545 at 1773.428 kb on + strand, within Echvi_1545 at 1773.429 kb on - strand, within Echvi_1545 at 1773.690 kb on + strand, within Echvi_1545 at 1773.805 kb on + strand at 1773.870 kb on + strand at 1773.871 kb on - strand at 1773.871 kb on - strand at 1773.871 kb on - strand at 1773.898 kb on + strand at 1773.898 kb on + strand at 1773.899 kb on - strand at 1773.899 kb on - strand at 1773.945 kb on + strand at 1773.945 kb on + strand at 1773.963 kb on + strand at 1773.964 kb on - strand at 1774.228 kb on + strand, within Echvi_1546 at 1774.229 kb on - strand, within Echvi_1546 at 1774.229 kb on - strand, within Echvi_1546 at 1774.444 kb on - strand, within Echvi_1546 at 1774.565 kb on - strand, within Echvi_1546 at 1774.600 kb on - strand, within Echvi_1546 at 1774.726 kb on + strand, within Echvi_1546 at 1774.785 kb on + strand, within Echvi_1546 at 1774.816 kb on + strand, within Echvi_1546 at 1774.816 kb on + strand, within Echvi_1546 at 1774.863 kb on + strand, within Echvi_1546 at 1774.863 kb on + strand, within Echvi_1546 at 1774.867 kb on - strand, within Echvi_1546 at 1774.875 kb on + strand, within Echvi_1546 at 1774.903 kb on - strand, within Echvi_1546 at 1774.903 kb on - strand at 1775.015 kb on - strand at 1775.091 kb on - strand at 1775.112 kb on + strand at 1775.112 kb on + strand at 1775.113 kb on - strand at 1775.164 kb on + strand at 1775.164 kb on + strand at 1775.286 kb on + strand at 1775.286 kb on + strand at 1775.286 kb on + strand at 1775.296 kb on + strand at 1775.315 kb on + strand at 1775.320 kb on + strand at 1775.402 kb on + strand, within Echvi_1547 at 1775.402 kb on + strand, within Echvi_1547 at 1775.403 kb on - strand, within Echvi_1547 at 1775.415 kb on - strand, within Echvi_1547 at 1775.429 kb on + strand, within Echvi_1547 at 1775.429 kb on + strand, within Echvi_1547 at 1775.492 kb on + strand, within Echvi_1547 at 1775.492 kb on + strand, within Echvi_1547 at 1775.493 kb on - strand at 1775.493 kb on - strand at 1775.493 kb on - strand at 1775.493 kb on - strand at 1775.522 kb on - strand at 1775.530 kb on + strand at 1775.594 kb on - strand at 1775.605 kb on + strand at 1775.605 kb on + strand at 1775.606 kb on - strand at 1775.606 kb on - strand at 1775.620 kb on + strand at 1775.620 kb on + strand at 1775.621 kb on - strand at 1775.624 kb on + strand at 1775.624 kb on + strand at 1775.624 kb on + strand at 1775.624 kb on + strand at 1775.624 kb on + strand at 1775.625 kb on - strand at 1775.625 kb on - strand at 1775.625 kb on - strand at 1775.703 kb on + strand at 1775.703 kb on + strand at 1775.770 kb on + strand at 1775.770 kb on + strand at 1775.771 kb on - strand at 1775.775 kb on - strand at 1775.817 kb on + strand at 1775.967 kb on + strand at 1775.971 kb on + strand at 1776.021 kb on + strand at 1776.022 kb on - strand at 1776.022 kb on - strand at 1776.025 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.025 mg/ml remove 1,772,954 - Echvi_1545 0.20 +0.5 1,772,996 + Echvi_1545 0.23 -0.3 1,773,001 + Echvi_1545 0.24 +0.3 1,773,170 + Echvi_1545 0.39 +0.8 1,773,170 + Echvi_1545 0.39 -0.8 1,773,170 + Echvi_1545 0.39 +0.9 1,773,170 + Echvi_1545 0.39 -0.7 1,773,170 + Echvi_1545 0.39 -0.4 1,773,171 - Echvi_1545 0.39 +0.0 1,773,171 - Echvi_1545 0.39 -0.1 1,773,171 - Echvi_1545 0.39 +0.2 1,773,197 + Echvi_1545 0.41 +0.4 1,773,198 - Echvi_1545 0.41 -0.6 1,773,247 + Echvi_1545 0.45 +1.3 1,773,248 - Echvi_1545 0.45 +1.2 1,773,402 + Echvi_1545 0.59 -0.5 1,773,403 - Echvi_1545 0.59 -0.0 1,773,428 + Echvi_1545 0.61 +0.1 1,773,428 + Echvi_1545 0.61 -0.3 1,773,429 - Echvi_1545 0.61 +0.0 1,773,690 + Echvi_1545 0.84 -1.1 1,773,805 + +0.2 1,773,870 + -0.8 1,773,871 - -0.6 1,773,871 - -0.3 1,773,871 - +0.5 1,773,898 + +0.8 1,773,898 + +0.6 1,773,899 - +0.7 1,773,899 - +0.7 1,773,945 + -1.0 1,773,945 + -0.6 1,773,963 + +1.4 1,773,964 - +0.6 1,774,228 + Echvi_1546 0.28 -2.4 1,774,229 - Echvi_1546 0.28 -1.2 1,774,229 - Echvi_1546 0.28 -0.2 1,774,444 - Echvi_1546 0.47 -0.9 1,774,565 - Echvi_1546 0.58 -0.9 1,774,600 - Echvi_1546 0.61 -0.0 1,774,726 + Echvi_1546 0.72 -1.8 1,774,785 + Echvi_1546 0.77 +0.3 1,774,816 + Echvi_1546 0.80 -0.1 1,774,816 + Echvi_1546 0.80 -0.1 1,774,863 + Echvi_1546 0.84 -0.2 1,774,863 + Echvi_1546 0.84 -0.3 1,774,867 - Echvi_1546 0.84 -1.3 1,774,875 + Echvi_1546 0.85 -0.8 1,774,903 - Echvi_1546 0.88 -1.2 1,774,903 - +1.5 1,775,015 - +0.2 1,775,091 - -0.6 1,775,112 + -0.2 1,775,112 + -0.5 1,775,113 - +0.6 1,775,164 + -0.5 1,775,164 + -0.3 1,775,286 + -0.6 1,775,286 + -0.2 1,775,286 + -0.7 1,775,296 + +0.7 1,775,315 + -0.1 1,775,320 + -0.3 1,775,402 + Echvi_1547 0.38 -0.6 1,775,402 + Echvi_1547 0.38 +0.5 1,775,403 - Echvi_1547 0.39 +0.8 1,775,415 - Echvi_1547 0.46 -0.5 1,775,429 + Echvi_1547 0.54 +1.4 1,775,429 + Echvi_1547 0.54 -1.1 1,775,492 + Echvi_1547 0.89 -0.7 1,775,492 + Echvi_1547 0.89 -0.1 1,775,493 - -1.5 1,775,493 - +0.5 1,775,493 - -0.4 1,775,493 - -0.1 1,775,522 - -0.4 1,775,530 + +0.2 1,775,594 - -0.2 1,775,605 + -1.2 1,775,605 + +0.0 1,775,606 - -2.9 1,775,606 - -0.4 1,775,620 + +0.0 1,775,620 + +0.0 1,775,621 - +1.8 1,775,624 + +0.3 1,775,624 + +1.1 1,775,624 + +0.0 1,775,624 + -0.3 1,775,624 + -0.1 1,775,625 - -0.2 1,775,625 - -0.2 1,775,625 - -1.2 1,775,703 + +1.1 1,775,703 + -3.1 1,775,770 + +2.0 1,775,770 + -0.1 1,775,771 - -0.0 1,775,775 - -0.8 1,775,817 + -0.3 1,775,967 + +0.0 1,775,971 + -0.2 1,776,021 + +1.1 1,776,022 - +0.5 1,776,022 - -0.6 1,776,025 + +0.2
Or see this region's nucleotide sequence