Experiment: m.b. Thallium(I) acetate 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1536 and Echvi_1537 are separated by 98 nucleotides Echvi_1537 and Echvi_1538 are separated by 66 nucleotides
Echvi_1536: Echvi_1536 - phosphatidylserine decarboxylase precursor-related protein, at 1,760,532 to 1,761,194
_1536
Echvi_1537: Echvi_1537 - hypothetical protein, at 1,761,293 to 1,761,730
_1537
Echvi_1538: Echvi_1538 - hypothetical protein, at 1,761,797 to 1,763,128
_1538
Position (kb)
1761
1762 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1760.296 kb on + strand at 1760.296 kb on + strand at 1760.296 kb on + strand at 1760.323 kb on - strand at 1760.350 kb on + strand at 1760.350 kb on + strand at 1760.391 kb on + strand at 1760.392 kb on - strand at 1760.393 kb on + strand at 1760.473 kb on - strand at 1760.509 kb on + strand at 1761.192 kb on + strand at 1761.310 kb on + strand at 1761.312 kb on + strand at 1761.420 kb on - strand, within Echvi_1537 at 1761.435 kb on - strand, within Echvi_1537 at 1761.435 kb on - strand, within Echvi_1537 at 1761.459 kb on + strand, within Echvi_1537 at 1761.460 kb on - strand, within Echvi_1537 at 1761.462 kb on + strand, within Echvi_1537 at 1761.463 kb on - strand, within Echvi_1537 at 1761.463 kb on - strand, within Echvi_1537 at 1761.490 kb on + strand, within Echvi_1537 at 1761.491 kb on - strand, within Echvi_1537 at 1761.492 kb on + strand, within Echvi_1537 at 1761.492 kb on + strand, within Echvi_1537 at 1761.492 kb on + strand, within Echvi_1537 at 1761.492 kb on + strand, within Echvi_1537 at 1761.493 kb on - strand, within Echvi_1537 at 1761.516 kb on + strand, within Echvi_1537 at 1761.517 kb on - strand, within Echvi_1537 at 1761.517 kb on - strand, within Echvi_1537 at 1761.643 kb on - strand, within Echvi_1537 at 1761.643 kb on - strand, within Echvi_1537 at 1761.723 kb on + strand at 1761.723 kb on + strand at 1761.738 kb on + strand at 1761.768 kb on + strand at 1761.778 kb on + strand at 1761.779 kb on - strand at 1761.859 kb on + strand at 1761.898 kb on - strand at 1761.902 kb on - strand at 1761.902 kb on - strand at 1761.902 kb on - strand at 1761.934 kb on - strand, within Echvi_1538 at 1761.994 kb on - strand, within Echvi_1538 at 1762.052 kb on + strand, within Echvi_1538 at 1762.053 kb on - strand, within Echvi_1538 at 1762.053 kb on - strand, within Echvi_1538 at 1762.053 kb on - strand, within Echvi_1538 at 1762.121 kb on + strand, within Echvi_1538 at 1762.121 kb on + strand, within Echvi_1538 at 1762.121 kb on + strand, within Echvi_1538 at 1762.127 kb on - strand, within Echvi_1538 at 1762.128 kb on + strand, within Echvi_1538 at 1762.143 kb on + strand, within Echvi_1538 at 1762.153 kb on + strand, within Echvi_1538 at 1762.154 kb on - strand, within Echvi_1538 at 1762.167 kb on - strand, within Echvi_1538 at 1762.167 kb on - strand, within Echvi_1538 at 1762.167 kb on - strand, within Echvi_1538 at 1762.191 kb on - strand, within Echvi_1538 at 1762.221 kb on - strand, within Echvi_1538 at 1762.221 kb on - strand, within Echvi_1538 at 1762.237 kb on - strand, within Echvi_1538 at 1762.237 kb on - strand, within Echvi_1538 at 1762.330 kb on + strand, within Echvi_1538 at 1762.330 kb on + strand, within Echvi_1538 at 1762.331 kb on - strand, within Echvi_1538 at 1762.331 kb on - strand, within Echvi_1538 at 1762.331 kb on - strand, within Echvi_1538 at 1762.444 kb on - strand, within Echvi_1538 at 1762.444 kb on - strand, within Echvi_1538 at 1762.444 kb on - strand, within Echvi_1538 at 1762.444 kb on - strand, within Echvi_1538 at 1762.448 kb on + strand, within Echvi_1538 at 1762.449 kb on - strand, within Echvi_1538 at 1762.449 kb on - strand, within Echvi_1538 at 1762.449 kb on - strand, within Echvi_1538 at 1762.449 kb on - strand, within Echvi_1538 at 1762.449 kb on - strand, within Echvi_1538 at 1762.449 kb on - strand, within Echvi_1538 at 1762.463 kb on - strand, within Echvi_1538 at 1762.463 kb on - strand, within Echvi_1538 at 1762.534 kb on + strand, within Echvi_1538 at 1762.534 kb on + strand, within Echvi_1538 at 1762.534 kb on + strand, within Echvi_1538 at 1762.534 kb on + strand, within Echvi_1538 at 1762.534 kb on + strand, within Echvi_1538 at 1762.535 kb on - strand, within Echvi_1538 at 1762.640 kb on + strand, within Echvi_1538
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.025 mg/ml remove 1,760,296 + -0.1 1,760,296 + +0.4 1,760,296 + -1.2 1,760,323 - +0.3 1,760,350 + -0.2 1,760,350 + -1.1 1,760,391 + -1.5 1,760,392 - +0.5 1,760,393 + +1.1 1,760,473 - +1.1 1,760,509 + +1.4 1,761,192 + -0.6 1,761,310 + +0.7 1,761,312 + -0.2 1,761,420 - Echvi_1537 0.29 +2.9 1,761,435 - Echvi_1537 0.32 +0.1 1,761,435 - Echvi_1537 0.32 -2.4 1,761,459 + Echvi_1537 0.38 +0.6 1,761,460 - Echvi_1537 0.38 +0.6 1,761,462 + Echvi_1537 0.39 +2.0 1,761,463 - Echvi_1537 0.39 +0.2 1,761,463 - Echvi_1537 0.39 -2.8 1,761,490 + Echvi_1537 0.45 +0.6 1,761,491 - Echvi_1537 0.45 -0.7 1,761,492 + Echvi_1537 0.45 +1.0 1,761,492 + Echvi_1537 0.45 +0.2 1,761,492 + Echvi_1537 0.45 +0.7 1,761,492 + Echvi_1537 0.45 +0.2 1,761,493 - Echvi_1537 0.46 +1.8 1,761,516 + Echvi_1537 0.51 +0.3 1,761,517 - Echvi_1537 0.51 -1.0 1,761,517 - Echvi_1537 0.51 +0.1 1,761,643 - Echvi_1537 0.80 -1.2 1,761,643 - Echvi_1537 0.80 +1.2 1,761,723 + +0.8 1,761,723 + +0.0 1,761,738 + -0.2 1,761,768 + -0.2 1,761,778 + +0.4 1,761,779 - +0.5 1,761,859 + +1.0 1,761,898 - -0.1 1,761,902 - -0.0 1,761,902 - +1.1 1,761,902 - -0.9 1,761,934 - Echvi_1538 0.10 +0.7 1,761,994 - Echvi_1538 0.15 +0.1 1,762,052 + Echvi_1538 0.19 +0.7 1,762,053 - Echvi_1538 0.19 +0.0 1,762,053 - Echvi_1538 0.19 -1.2 1,762,053 - Echvi_1538 0.19 +0.7 1,762,121 + Echvi_1538 0.24 +0.4 1,762,121 + Echvi_1538 0.24 +0.9 1,762,121 + Echvi_1538 0.24 -0.2 1,762,127 - Echvi_1538 0.25 +0.0 1,762,128 + Echvi_1538 0.25 -0.5 1,762,143 + Echvi_1538 0.26 -0.3 1,762,153 + Echvi_1538 0.27 -0.3 1,762,154 - Echvi_1538 0.27 -0.4 1,762,167 - Echvi_1538 0.28 -0.4 1,762,167 - Echvi_1538 0.28 +0.2 1,762,167 - Echvi_1538 0.28 +0.8 1,762,191 - Echvi_1538 0.30 +2.1 1,762,221 - Echvi_1538 0.32 +0.2 1,762,221 - Echvi_1538 0.32 +0.2 1,762,237 - Echvi_1538 0.33 -0.1 1,762,237 - Echvi_1538 0.33 -0.7 1,762,330 + Echvi_1538 0.40 +0.3 1,762,330 + Echvi_1538 0.40 -1.6 1,762,331 - Echvi_1538 0.40 -0.6 1,762,331 - Echvi_1538 0.40 +0.0 1,762,331 - Echvi_1538 0.40 +0.4 1,762,444 - Echvi_1538 0.49 +2.0 1,762,444 - Echvi_1538 0.49 +0.1 1,762,444 - Echvi_1538 0.49 +1.0 1,762,444 - Echvi_1538 0.49 +0.9 1,762,448 + Echvi_1538 0.49 +0.2 1,762,449 - Echvi_1538 0.49 -0.6 1,762,449 - Echvi_1538 0.49 +0.2 1,762,449 - Echvi_1538 0.49 +0.2 1,762,449 - Echvi_1538 0.49 +1.8 1,762,449 - Echvi_1538 0.49 +0.1 1,762,449 - Echvi_1538 0.49 +0.1 1,762,463 - Echvi_1538 0.50 +1.0 1,762,463 - Echvi_1538 0.50 +1.3 1,762,534 + Echvi_1538 0.55 +0.8 1,762,534 + Echvi_1538 0.55 -0.3 1,762,534 + Echvi_1538 0.55 -0.3 1,762,534 + Echvi_1538 0.55 +0.5 1,762,534 + Echvi_1538 0.55 +0.3 1,762,535 - Echvi_1538 0.55 -0.1 1,762,640 + Echvi_1538 0.63 +1.4
Or see this region's nucleotide sequence