Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1444

Experiment: m.b. Thallium(I) acetate 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEchvi_1443 and Echvi_1444 are separated by 513 nucleotidesEchvi_1444 and Echvi_1445 are separated by 101 nucleotides Echvi_1443: Echvi_1443 - protein-(glutamine-N5) methyltransferase, release factor-specific, at 1,656,105 to 1,656,944 _1443 Echvi_1444: Echvi_1444 - Acetyltransferases, including N-acetylases of ribosomal proteins, at 1,657,458 to 1,657,985 _1444 Echvi_1445: Echvi_1445 - peptide chain release factor 1, at 1,658,087 to 1,659,163 _1445 Position (kb) 1657 1658Strain fitness (log2 ratio) -3 -2 -1 0 1at 1656.924 kb on + strandat 1656.924 kb on + strandat 1656.924 kb on + strandat 1656.925 kb on - strandat 1656.925 kb on - strandat 1657.014 kb on + strandat 1657.035 kb on + strandat 1657.064 kb on + strandat 1657.065 kb on - strandat 1657.073 kb on + strandat 1657.074 kb on - strandat 1657.074 kb on - strandat 1657.076 kb on + strandat 1657.077 kb on - strandat 1657.077 kb on - strandat 1657.077 kb on - strandat 1657.077 kb on - strandat 1657.091 kb on + strandat 1657.091 kb on + strandat 1657.092 kb on - strandat 1657.171 kb on + strandat 1657.181 kb on + strandat 1657.235 kb on - strandat 1657.290 kb on - strandat 1657.301 kb on + strandat 1657.302 kb on - strandat 1657.302 kb on - strandat 1657.302 kb on - strandat 1657.318 kb on + strandat 1657.319 kb on - strandat 1657.319 kb on - strandat 1657.354 kb on - strandat 1657.464 kb on - strandat 1657.476 kb on + strandat 1657.477 kb on - strandat 1657.597 kb on + strand, within Echvi_1444at 1657.621 kb on - strand, within Echvi_1444at 1657.759 kb on - strand, within Echvi_1444at 1657.823 kb on + strand, within Echvi_1444at 1657.823 kb on + strand, within Echvi_1444at 1657.824 kb on - strand, within Echvi_1444at 1657.858 kb on + strand, within Echvi_1444at 1657.859 kb on - strand, within Echvi_1444at 1657.859 kb on - strand, within Echvi_1444at 1657.859 kb on - strand, within Echvi_1444at 1657.859 kb on - strand, within Echvi_1444at 1657.918 kb on + strand, within Echvi_1444at 1657.949 kb on + strandat 1657.949 kb on + strandat 1657.950 kb on - strandat 1658.013 kb on + strandat 1658.014 kb on - strandat 1658.014 kb on - strandat 1658.047 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.025 mg/ml
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1,656,924 + +0.2
1,656,924 + +1.0
1,656,924 + -2.0
1,656,925 - +1.1
1,656,925 - +1.3
1,657,014 + -0.3
1,657,035 + -0.5
1,657,064 + +0.6
1,657,065 - +0.3
1,657,073 + +0.2
1,657,074 - -1.5
1,657,074 - -1.5
1,657,076 + +1.0
1,657,077 - -0.8
1,657,077 - +0.5
1,657,077 - +0.9
1,657,077 - -0.1
1,657,091 + +0.3
1,657,091 + +1.1
1,657,092 - +0.9
1,657,171 + +1.0
1,657,181 + +0.2
1,657,235 - -2.5
1,657,290 - -1.5
1,657,301 + +1.1
1,657,302 - -1.8
1,657,302 - -0.1
1,657,302 - -0.3
1,657,318 + +1.2
1,657,319 - +0.6
1,657,319 - -2.6
1,657,354 - -0.8
1,657,464 - +0.2
1,657,476 + -1.1
1,657,477 - +0.3
1,657,597 + Echvi_1444 0.26 -1.1
1,657,621 - Echvi_1444 0.31 -1.3
1,657,759 - Echvi_1444 0.57 -0.2
1,657,823 + Echvi_1444 0.69 +0.1
1,657,823 + Echvi_1444 0.69 -1.3
1,657,824 - Echvi_1444 0.69 -1.7
1,657,858 + Echvi_1444 0.76 -0.2
1,657,859 - Echvi_1444 0.76 -1.3
1,657,859 - Echvi_1444 0.76 -0.3
1,657,859 - Echvi_1444 0.76 -0.1
1,657,859 - Echvi_1444 0.76 -1.0
1,657,918 + Echvi_1444 0.87 +0.4
1,657,949 + +0.1
1,657,949 + -0.4
1,657,950 - +0.5
1,658,013 + +0.5
1,658,014 - +1.4
1,658,014 - -0.3
1,658,047 - -3.1

Or see this region's nucleotide sequence