Experiment: m.b. Thallium(I) acetate 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0542 and Echvi_0543 are separated by 192 nucleotides Echvi_0543 and Echvi_0544 are separated by 473 nucleotides
Echvi_0542: Echvi_0542 - RND family efflux transporter, MFP subunit, at 606,216 to 607,307
_0542
Echvi_0543: Echvi_0543 - hypothetical protein, at 607,500 to 607,907
_0543
Echvi_0544: Echvi_0544 - DNA-binding transcriptional activator of the SARP family, at 608,381 to 610,894
_0544
Position (kb) 607
608 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 606.560 kb on + strand, within Echvi_0542 at 606.560 kb on + strand, within Echvi_0542 at 606.569 kb on + strand, within Echvi_0542 at 606.602 kb on + strand, within Echvi_0542 at 606.638 kb on + strand, within Echvi_0542 at 606.695 kb on + strand, within Echvi_0542 at 606.695 kb on + strand, within Echvi_0542 at 606.696 kb on - strand, within Echvi_0542 at 606.696 kb on - strand, within Echvi_0542 at 606.696 kb on - strand, within Echvi_0542 at 606.696 kb on - strand, within Echvi_0542 at 606.697 kb on + strand, within Echvi_0542 at 606.697 kb on + strand, within Echvi_0542 at 606.727 kb on + strand, within Echvi_0542 at 606.727 kb on + strand, within Echvi_0542 at 606.727 kb on + strand, within Echvi_0542 at 606.727 kb on + strand, within Echvi_0542 at 606.727 kb on + strand, within Echvi_0542 at 606.727 kb on + strand, within Echvi_0542 at 606.727 kb on + strand, within Echvi_0542 at 606.728 kb on - strand, within Echvi_0542 at 606.728 kb on - strand, within Echvi_0542 at 606.728 kb on - strand, within Echvi_0542 at 606.728 kb on - strand, within Echvi_0542 at 606.728 kb on - strand, within Echvi_0542 at 606.729 kb on - strand, within Echvi_0542 at 606.730 kb on + strand, within Echvi_0542 at 606.730 kb on + strand, within Echvi_0542 at 606.731 kb on - strand, within Echvi_0542 at 606.731 kb on - strand, within Echvi_0542 at 606.733 kb on - strand, within Echvi_0542 at 606.740 kb on + strand, within Echvi_0542 at 606.740 kb on + strand, within Echvi_0542 at 606.740 kb on + strand, within Echvi_0542 at 606.740 kb on + strand, within Echvi_0542 at 606.741 kb on - strand, within Echvi_0542 at 606.741 kb on - strand, within Echvi_0542 at 606.741 kb on - strand, within Echvi_0542 at 606.791 kb on + strand, within Echvi_0542 at 606.792 kb on - strand, within Echvi_0542 at 606.902 kb on + strand, within Echvi_0542 at 606.903 kb on - strand, within Echvi_0542 at 606.975 kb on + strand, within Echvi_0542 at 606.975 kb on + strand, within Echvi_0542 at 606.975 kb on + strand, within Echvi_0542 at 606.976 kb on - strand, within Echvi_0542 at 606.976 kb on - strand, within Echvi_0542 at 607.024 kb on + strand, within Echvi_0542 at 607.024 kb on + strand, within Echvi_0542 at 607.122 kb on + strand, within Echvi_0542 at 607.122 kb on + strand, within Echvi_0542 at 607.123 kb on - strand, within Echvi_0542 at 607.159 kb on + strand, within Echvi_0542 at 607.159 kb on + strand, within Echvi_0542 at 607.159 kb on + strand, within Echvi_0542 at 607.159 kb on + strand, within Echvi_0542 at 607.159 kb on + strand, within Echvi_0542 at 607.159 kb on + strand, within Echvi_0542 at 607.160 kb on - strand, within Echvi_0542 at 607.160 kb on - strand, within Echvi_0542 at 607.160 kb on - strand, within Echvi_0542 at 607.160 kb on - strand, within Echvi_0542 at 607.160 kb on - strand, within Echvi_0542 at 607.206 kb on + strand at 607.206 kb on + strand at 607.207 kb on - strand at 607.257 kb on - strand at 607.284 kb on + strand at 607.285 kb on - strand at 607.354 kb on + strand at 607.354 kb on + strand at 607.383 kb on + strand at 607.422 kb on + strand at 607.422 kb on + strand at 607.426 kb on + strand at 607.426 kb on + strand at 607.433 kb on + strand at 607.443 kb on - strand at 607.467 kb on + strand at 607.467 kb on + strand at 607.494 kb on - strand at 607.498 kb on + strand at 607.498 kb on + strand at 607.498 kb on + strand at 607.498 kb on + strand at 607.498 kb on + strand at 607.498 kb on + strand at 607.498 kb on + strand at 607.498 kb on + strand at 607.498 kb on + strand at 607.498 kb on + strand at 607.498 kb on + strand at 607.499 kb on - strand at 607.499 kb on - strand at 607.499 kb on - strand at 607.499 kb on - strand at 607.501 kb on + strand at 607.501 kb on + strand at 607.502 kb on - strand at 607.502 kb on - strand at 607.502 kb on - strand at 607.503 kb on + strand at 607.503 kb on + strand at 607.520 kb on + strand at 607.521 kb on - strand at 607.524 kb on + strand at 607.525 kb on - strand at 607.542 kb on + strand, within Echvi_0543 at 607.542 kb on + strand, within Echvi_0543 at 607.543 kb on - strand, within Echvi_0543 at 607.563 kb on - strand, within Echvi_0543 at 607.608 kb on + strand, within Echvi_0543 at 607.609 kb on - strand, within Echvi_0543 at 607.612 kb on + strand, within Echvi_0543 at 607.613 kb on - strand, within Echvi_0543 at 607.661 kb on + strand, within Echvi_0543 at 607.754 kb on + strand, within Echvi_0543 at 607.755 kb on - strand, within Echvi_0543 at 607.799 kb on - strand, within Echvi_0543 at 607.871 kb on + strand at 607.871 kb on + strand at 607.871 kb on + strand at 607.871 kb on + strand at 607.872 kb on - strand at 607.882 kb on - strand at 607.882 kb on - strand at 607.882 kb on - strand at 607.923 kb on + strand at 607.924 kb on - strand at 607.957 kb on + strand at 607.960 kb on + strand at 607.961 kb on - strand at 607.982 kb on - strand at 607.990 kb on + strand at 607.991 kb on - strand at 607.991 kb on - strand at 607.995 kb on + strand at 608.029 kb on + strand at 608.030 kb on - strand at 608.037 kb on + strand at 608.051 kb on - strand at 608.063 kb on - strand at 608.063 kb on - strand at 608.086 kb on + strand at 608.123 kb on - strand at 608.161 kb on + strand at 608.181 kb on + strand at 608.193 kb on + strand at 608.193 kb on + strand at 608.193 kb on + strand at 608.193 kb on + strand at 608.193 kb on + strand at 608.241 kb on - strand at 608.246 kb on + strand at 608.255 kb on - strand at 608.255 kb on - strand at 608.255 kb on - strand at 608.284 kb on + strand at 608.284 kb on + strand at 608.285 kb on - strand at 608.308 kb on + strand at 608.329 kb on - strand at 608.329 kb on - strand at 608.329 kb on - strand at 608.331 kb on + strand at 608.332 kb on - strand at 608.337 kb on + strand at 608.337 kb on + strand at 608.338 kb on - strand at 608.338 kb on - strand at 608.338 kb on - strand at 608.338 kb on - strand at 608.338 kb on - strand at 608.352 kb on + strand at 608.407 kb on - strand at 608.410 kb on - strand at 608.410 kb on - strand at 608.432 kb on - strand at 608.439 kb on + strand at 608.439 kb on + strand at 608.448 kb on + strand at 608.449 kb on - strand at 608.507 kb on + strand at 608.507 kb on + strand at 608.507 kb on + strand at 608.507 kb on + strand at 608.507 kb on + strand at 608.508 kb on - strand at 608.508 kb on - strand at 608.508 kb on - strand at 608.508 kb on - strand at 608.509 kb on + strand at 608.510 kb on - strand at 608.510 kb on - strand at 608.574 kb on + strand at 608.574 kb on + strand at 608.574 kb on + strand at 608.597 kb on + strand at 608.597 kb on + strand at 608.599 kb on + strand at 608.600 kb on - strand at 608.643 kb on + strand, within Echvi_0544 at 608.643 kb on + strand, within Echvi_0544 at 608.678 kb on - strand, within Echvi_0544 at 608.741 kb on - strand, within Echvi_0544 at 608.848 kb on + strand, within Echvi_0544 at 608.849 kb on - strand, within Echvi_0544 at 608.852 kb on + strand, within Echvi_0544 at 608.853 kb on - strand, within Echvi_0544 at 608.853 kb on - strand, within Echvi_0544
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.025 mg/ml remove 606,560 + Echvi_0542 0.32 +0.2 606,560 + Echvi_0542 0.32 -0.1 606,569 + Echvi_0542 0.32 -0.6 606,602 + Echvi_0542 0.35 +0.1 606,638 + Echvi_0542 0.39 -0.8 606,695 + Echvi_0542 0.44 +0.6 606,695 + Echvi_0542 0.44 -1.0 606,696 - Echvi_0542 0.44 -0.9 606,696 - Echvi_0542 0.44 +1.2 606,696 - Echvi_0542 0.44 -1.1 606,696 - Echvi_0542 0.44 -2.1 606,697 + Echvi_0542 0.44 -0.2 606,697 + Echvi_0542 0.44 -1.5 606,727 + Echvi_0542 0.47 +1.9 606,727 + Echvi_0542 0.47 -1.4 606,727 + Echvi_0542 0.47 -0.5 606,727 + Echvi_0542 0.47 -0.1 606,727 + Echvi_0542 0.47 +0.5 606,727 + Echvi_0542 0.47 +1.0 606,727 + Echvi_0542 0.47 -1.2 606,728 - Echvi_0542 0.47 +0.4 606,728 - Echvi_0542 0.47 -0.3 606,728 - Echvi_0542 0.47 -1.1 606,728 - Echvi_0542 0.47 -0.6 606,728 - Echvi_0542 0.47 -0.6 606,729 - Echvi_0542 0.47 -0.1 606,730 + Echvi_0542 0.47 -0.4 606,730 + Echvi_0542 0.47 -0.8 606,731 - Echvi_0542 0.47 -3.4 606,731 - Echvi_0542 0.47 -1.6 606,733 - Echvi_0542 0.47 -0.1 606,740 + Echvi_0542 0.48 +0.4 606,740 + Echvi_0542 0.48 +0.0 606,740 + Echvi_0542 0.48 +0.5 606,740 + Echvi_0542 0.48 -0.0 606,741 - Echvi_0542 0.48 -0.0 606,741 - Echvi_0542 0.48 -1.1 606,741 - Echvi_0542 0.48 +0.9 606,791 + Echvi_0542 0.53 -1.1 606,792 - Echvi_0542 0.53 -0.3 606,902 + Echvi_0542 0.63 +0.7 606,903 - Echvi_0542 0.63 -0.0 606,975 + Echvi_0542 0.70 +1.1 606,975 + Echvi_0542 0.70 -0.6 606,975 + Echvi_0542 0.70 -0.8 606,976 - Echvi_0542 0.70 +0.9 606,976 - Echvi_0542 0.70 -0.7 607,024 + Echvi_0542 0.74 +1.2 607,024 + Echvi_0542 0.74 -0.3 607,122 + Echvi_0542 0.83 +0.1 607,122 + Echvi_0542 0.83 -0.1 607,123 - Echvi_0542 0.83 +0.9 607,159 + Echvi_0542 0.86 -0.9 607,159 + Echvi_0542 0.86 -0.3 607,159 + Echvi_0542 0.86 -0.6 607,159 + Echvi_0542 0.86 +0.0 607,159 + Echvi_0542 0.86 +0.6 607,159 + Echvi_0542 0.86 +0.1 607,160 - Echvi_0542 0.86 -0.4 607,160 - Echvi_0542 0.86 -0.2 607,160 - Echvi_0542 0.86 +0.0 607,160 - Echvi_0542 0.86 -0.2 607,160 - Echvi_0542 0.86 -0.9 607,206 + -0.2 607,206 + -0.0 607,207 - -0.1 607,257 - -1.2 607,284 + +0.1 607,285 - -0.7 607,354 + -0.6 607,354 + +0.8 607,383 + -1.9 607,422 + +2.5 607,422 + +2.1 607,426 + +0.7 607,426 + -0.5 607,433 + -0.1 607,443 - -1.5 607,467 + +0.8 607,467 + +0.7 607,494 - +0.7 607,498 + -0.3 607,498 + +0.2 607,498 + -0.7 607,498 + -0.5 607,498 + -0.4 607,498 + +0.1 607,498 + +0.3 607,498 + +0.5 607,498 + +0.4 607,498 + +0.1 607,498 + -0.3 607,499 - -0.4 607,499 - +0.6 607,499 - -0.1 607,499 - -1.4 607,501 + -1.8 607,501 + -0.2 607,502 - +0.6 607,502 - -0.0 607,502 - +0.2 607,503 + +0.6 607,503 + +0.8 607,520 + -0.5 607,521 - -0.9 607,524 + -0.1 607,525 - -0.2 607,542 + Echvi_0543 0.10 +0.7 607,542 + Echvi_0543 0.10 +0.5 607,543 - Echvi_0543 0.11 +0.0 607,563 - Echvi_0543 0.15 +1.3 607,608 + Echvi_0543 0.26 +0.4 607,609 - Echvi_0543 0.27 +0.3 607,612 + Echvi_0543 0.27 +0.4 607,613 - Echvi_0543 0.28 +1.1 607,661 + Echvi_0543 0.39 +0.4 607,754 + Echvi_0543 0.62 +0.3 607,755 - Echvi_0543 0.62 +0.3 607,799 - Echvi_0543 0.73 +1.2 607,871 + -0.2 607,871 + +5.1 607,871 + +0.1 607,871 + +0.0 607,872 - -0.1 607,882 - +0.2 607,882 - +1.2 607,882 - +1.3 607,923 + +1.2 607,924 - -1.6 607,957 + +0.1 607,960 + -0.4 607,961 - +0.2 607,982 - -0.0 607,990 + +1.3 607,991 - +0.6 607,991 - -1.7 607,995 + +0.9 608,029 + +0.9 608,030 - +0.2 608,037 + +0.2 608,051 - +0.6 608,063 - +0.2 608,063 - +0.1 608,086 + +0.0 608,123 - -1.9 608,161 + +0.2 608,181 + -0.7 608,193 + -0.6 608,193 + -0.3 608,193 + +1.3 608,193 + +0.2 608,193 + +0.1 608,241 - -0.6 608,246 + -0.2 608,255 - -0.7 608,255 - +0.0 608,255 - +0.7 608,284 + +0.6 608,284 + +0.5 608,285 - +0.2 608,308 + +0.6 608,329 - -0.2 608,329 - +0.2 608,329 - -2.4 608,331 + +0.1 608,332 - +0.2 608,337 + +0.9 608,337 + +0.9 608,338 - -1.8 608,338 - +1.7 608,338 - +0.9 608,338 - -0.0 608,338 - -1.3 608,352 + +1.5 608,407 - +0.4 608,410 - +0.2 608,410 - -0.9 608,432 - +1.2 608,439 + +1.2 608,439 + -1.0 608,448 + -0.3 608,449 - -0.3 608,507 + +0.2 608,507 + +0.9 608,507 + +0.5 608,507 + +0.8 608,507 + -0.6 608,508 - -1.5 608,508 - -0.5 608,508 - -0.1 608,508 - +0.3 608,509 + -0.8 608,510 - +1.0 608,510 - +0.2 608,574 + +0.9 608,574 + +0.5 608,574 + -0.5 608,597 + +0.1 608,597 + -0.3 608,599 + -0.6 608,600 - -1.0 608,643 + Echvi_0544 0.10 -0.7 608,643 + Echvi_0544 0.10 +1.3 608,678 - Echvi_0544 0.12 -0.3 608,741 - Echvi_0544 0.14 -1.3 608,848 + Echvi_0544 0.19 +0.3 608,849 - Echvi_0544 0.19 -0.3 608,852 + Echvi_0544 0.19 +1.0 608,853 - Echvi_0544 0.19 -0.1 608,853 - Echvi_0544 0.19 -1.0
Or see this region's nucleotide sequence