Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3531 and EX28DRAFT_3532 overlap by 1 nucleotides EX28DRAFT_3532 and EX28DRAFT_3533 are separated by 411 nucleotides EX28DRAFT_3533 and EX28DRAFT_3534 are separated by 476 nucleotides
EX28DRAFT_3531: EX28DRAFT_3531 - hypothetical protein, at 194,237 to 194,557
_3531
EX28DRAFT_3532: EX28DRAFT_3532 - YfaZ precursor, at 194,557 to 195,102
_3532
EX28DRAFT_3533: EX28DRAFT_3533 - Uncharacterized protein conserved in bacteria, at 195,514 to 196,872
_3533
EX28DRAFT_3534: EX28DRAFT_3534 - Putative GTPases (G3E family), at 197,349 to 198,302
_3534
Position (kb) 195
196
197 Strain fitness (log2 ratio) -2
-1
0
1
2 at 194.579 kb on - strand at 194.582 kb on + strand at 194.582 kb on + strand at 194.670 kb on + strand, within EX28DRAFT_3532 at 194.670 kb on + strand, within EX28DRAFT_3532 at 194.709 kb on - strand, within EX28DRAFT_3532 at 194.747 kb on + strand, within EX28DRAFT_3532 at 194.748 kb on - strand, within EX28DRAFT_3532 at 194.748 kb on - strand, within EX28DRAFT_3532 at 194.964 kb on - strand, within EX28DRAFT_3532 at 195.107 kb on + strand at 195.296 kb on - strand at 195.417 kb on + strand at 195.419 kb on + strand at 195.419 kb on + strand at 195.419 kb on + strand at 195.419 kb on + strand at 195.420 kb on - strand at 195.420 kb on - strand at 195.497 kb on - strand at 195.497 kb on - strand at 195.507 kb on + strand at 195.513 kb on + strand at 195.514 kb on - strand at 195.631 kb on + strand at 195.699 kb on + strand, within EX28DRAFT_3533 at 195.794 kb on + strand, within EX28DRAFT_3533 at 195.889 kb on - strand, within EX28DRAFT_3533 at 196.159 kb on - strand, within EX28DRAFT_3533 at 196.218 kb on + strand, within EX28DRAFT_3533 at 196.219 kb on - strand, within EX28DRAFT_3533 at 196.327 kb on + strand, within EX28DRAFT_3533 at 196.327 kb on + strand, within EX28DRAFT_3533 at 196.328 kb on - strand, within EX28DRAFT_3533 at 196.328 kb on - strand, within EX28DRAFT_3533 at 196.354 kb on + strand, within EX28DRAFT_3533 at 196.437 kb on + strand, within EX28DRAFT_3533 at 196.466 kb on - strand, within EX28DRAFT_3533 at 196.466 kb on - strand, within EX28DRAFT_3533 at 196.777 kb on - strand at 196.845 kb on + strand at 196.847 kb on + strand at 196.847 kb on + strand at 196.870 kb on + strand at 196.870 kb on + strand at 196.876 kb on + strand at 196.876 kb on + strand at 196.913 kb on + strand at 196.973 kb on + strand at 196.973 kb on + strand at 196.974 kb on - strand at 196.974 kb on - strand at 196.988 kb on + strand at 197.003 kb on - strand at 197.003 kb on - strand at 197.003 kb on - strand at 197.003 kb on - strand at 197.003 kb on - strand at 197.014 kb on + strand at 197.015 kb on - strand at 197.261 kb on + strand at 197.409 kb on - strand at 197.699 kb on + strand, within EX28DRAFT_3534 at 197.699 kb on + strand, within EX28DRAFT_3534 at 197.700 kb on - strand, within EX28DRAFT_3534 at 197.755 kb on + strand, within EX28DRAFT_3534
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 194,579 - -0.2 194,582 + +0.1 194,582 + +0.9 194,670 + EX28DRAFT_3532 0.21 +0.1 194,670 + EX28DRAFT_3532 0.21 -2.1 194,709 - EX28DRAFT_3532 0.28 -0.3 194,747 + EX28DRAFT_3532 0.35 +0.8 194,748 - EX28DRAFT_3532 0.35 -0.5 194,748 - EX28DRAFT_3532 0.35 -1.3 194,964 - EX28DRAFT_3532 0.75 -0.5 195,107 + -0.1 195,296 - -0.8 195,417 + +0.3 195,419 + +0.2 195,419 + +0.2 195,419 + -0.6 195,419 + -0.4 195,420 - -1.2 195,420 - +0.2 195,497 - +0.4 195,497 - +0.0 195,507 + +0.0 195,513 + -0.7 195,514 - +0.4 195,631 + +0.2 195,699 + EX28DRAFT_3533 0.14 +0.3 195,794 + EX28DRAFT_3533 0.21 +0.1 195,889 - EX28DRAFT_3533 0.28 +0.2 196,159 - EX28DRAFT_3533 0.47 +1.0 196,218 + EX28DRAFT_3533 0.52 -1.8 196,219 - EX28DRAFT_3533 0.52 +0.2 196,327 + EX28DRAFT_3533 0.60 -0.3 196,327 + EX28DRAFT_3533 0.60 +0.7 196,328 - EX28DRAFT_3533 0.60 +0.3 196,328 - EX28DRAFT_3533 0.60 +0.2 196,354 + EX28DRAFT_3533 0.62 +0.1 196,437 + EX28DRAFT_3533 0.68 +0.2 196,466 - EX28DRAFT_3533 0.70 -0.0 196,466 - EX28DRAFT_3533 0.70 +0.7 196,777 - -0.1 196,845 + -0.5 196,847 + -0.1 196,847 + -1.0 196,870 + +0.7 196,870 + +0.1 196,876 + +1.1 196,876 + +0.3 196,913 + -0.3 196,973 + -0.0 196,973 + -0.1 196,974 - -0.7 196,974 - -0.1 196,988 + +0.7 197,003 - +0.3 197,003 - +2.1 197,003 - +0.8 197,003 - +0.0 197,003 - -0.2 197,014 + +0.5 197,015 - -0.2 197,261 + -0.3 197,409 - +0.3 197,699 + EX28DRAFT_3534 0.37 +0.0 197,699 + EX28DRAFT_3534 0.37 -0.4 197,700 - EX28DRAFT_3534 0.37 -0.4 197,755 + EX28DRAFT_3534 0.43 -0.5
Or see this region's nucleotide sequence