Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3023 and EX28DRAFT_3024 overlap by 4 nucleotides EX28DRAFT_3024 and EX28DRAFT_3025 overlap by 8 nucleotides EX28DRAFT_3025 and EX28DRAFT_3026 are separated by 5 nucleotides
EX28DRAFT_3023: EX28DRAFT_3023 - oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain, at 334,399 to 335,376
_3023
EX28DRAFT_3024: EX28DRAFT_3024 - oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain, at 335,373 to 336,350
_3024
EX28DRAFT_3025: EX28DRAFT_3025 - ABC-type dipeptide/oligopeptide/nickel transport systems, permease components, at 336,343 to 337,188
_3025
EX28DRAFT_3026: EX28DRAFT_3026 - ABC-type dipeptide/oligopeptide/nickel transport systems, permease components, at 337,194 to 338,147
_3026
Position (kb) 335
336
337 Strain fitness (log2 ratio) -1
0
1
2 at 334.374 kb on - strand at 334.378 kb on + strand at 334.378 kb on + strand at 334.379 kb on - strand at 334.379 kb on - strand at 334.396 kb on + strand at 334.400 kb on + strand at 334.401 kb on - strand at 334.643 kb on + strand, within EX28DRAFT_3023 at 334.643 kb on + strand, within EX28DRAFT_3023 at 334.644 kb on - strand, within EX28DRAFT_3023 at 334.685 kb on + strand, within EX28DRAFT_3023 at 334.685 kb on + strand, within EX28DRAFT_3023 at 334.686 kb on - strand, within EX28DRAFT_3023 at 334.686 kb on - strand, within EX28DRAFT_3023 at 334.710 kb on + strand, within EX28DRAFT_3023 at 334.710 kb on + strand, within EX28DRAFT_3023 at 334.748 kb on + strand, within EX28DRAFT_3023 at 334.748 kb on + strand, within EX28DRAFT_3023 at 334.785 kb on + strand, within EX28DRAFT_3023 at 334.879 kb on - strand, within EX28DRAFT_3023 at 334.955 kb on + strand, within EX28DRAFT_3023 at 334.956 kb on - strand, within EX28DRAFT_3023 at 335.063 kb on + strand, within EX28DRAFT_3023 at 335.299 kb on - strand at 335.437 kb on + strand at 335.602 kb on + strand, within EX28DRAFT_3024 at 335.665 kb on + strand, within EX28DRAFT_3024 at 335.666 kb on - strand, within EX28DRAFT_3024 at 336.197 kb on + strand, within EX28DRAFT_3024 at 336.336 kb on + strand at 336.336 kb on + strand at 336.339 kb on + strand at 336.339 kb on + strand at 336.339 kb on + strand at 336.339 kb on + strand at 336.340 kb on - strand at 336.340 kb on - strand at 336.470 kb on + strand, within EX28DRAFT_3025 at 336.470 kb on + strand, within EX28DRAFT_3025 at 336.470 kb on + strand, within EX28DRAFT_3025 at 336.470 kb on + strand, within EX28DRAFT_3025 at 336.471 kb on - strand, within EX28DRAFT_3025 at 336.487 kb on - strand, within EX28DRAFT_3025 at 336.677 kb on + strand, within EX28DRAFT_3025 at 336.678 kb on - strand, within EX28DRAFT_3025 at 336.678 kb on - strand, within EX28DRAFT_3025 at 336.751 kb on - strand, within EX28DRAFT_3025 at 336.785 kb on + strand, within EX28DRAFT_3025 at 336.786 kb on - strand, within EX28DRAFT_3025 at 336.966 kb on - strand, within EX28DRAFT_3025 at 337.111 kb on - strand at 337.231 kb on + strand at 337.295 kb on + strand, within EX28DRAFT_3026
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 334,374 - +0.1 334,378 + +0.8 334,378 + +0.4 334,379 - -0.4 334,379 - -0.2 334,396 + -0.1 334,400 + -0.0 334,401 - -0.3 334,643 + EX28DRAFT_3023 0.25 -0.8 334,643 + EX28DRAFT_3023 0.25 -1.3 334,644 - EX28DRAFT_3023 0.25 -0.2 334,685 + EX28DRAFT_3023 0.29 -1.4 334,685 + EX28DRAFT_3023 0.29 +1.0 334,686 - EX28DRAFT_3023 0.29 +0.0 334,686 - EX28DRAFT_3023 0.29 +0.2 334,710 + EX28DRAFT_3023 0.32 -0.4 334,710 + EX28DRAFT_3023 0.32 -0.7 334,748 + EX28DRAFT_3023 0.36 -0.0 334,748 + EX28DRAFT_3023 0.36 -0.1 334,785 + EX28DRAFT_3023 0.39 +0.4 334,879 - EX28DRAFT_3023 0.49 +0.1 334,955 + EX28DRAFT_3023 0.57 -0.0 334,956 - EX28DRAFT_3023 0.57 -0.4 335,063 + EX28DRAFT_3023 0.68 +0.2 335,299 - -0.3 335,437 + -0.7 335,602 + EX28DRAFT_3024 0.23 +1.2 335,665 + EX28DRAFT_3024 0.30 -0.3 335,666 - EX28DRAFT_3024 0.30 -0.1 336,197 + EX28DRAFT_3024 0.84 +0.4 336,336 + +0.2 336,336 + -0.2 336,339 + +0.4 336,339 + -0.9 336,339 + +0.7 336,339 + -0.1 336,340 - +2.0 336,340 - -0.1 336,470 + EX28DRAFT_3025 0.15 +0.2 336,470 + EX28DRAFT_3025 0.15 +0.1 336,470 + EX28DRAFT_3025 0.15 +0.1 336,470 + EX28DRAFT_3025 0.15 -0.6 336,471 - EX28DRAFT_3025 0.15 +0.3 336,487 - EX28DRAFT_3025 0.17 +0.1 336,677 + EX28DRAFT_3025 0.39 -1.4 336,678 - EX28DRAFT_3025 0.40 +0.8 336,678 - EX28DRAFT_3025 0.40 -0.2 336,751 - EX28DRAFT_3025 0.48 -0.1 336,785 + EX28DRAFT_3025 0.52 +0.1 336,786 - EX28DRAFT_3025 0.52 +0.1 336,966 - EX28DRAFT_3025 0.74 -0.4 337,111 - -0.1 337,231 + -0.7 337,295 + EX28DRAFT_3026 0.11 +0.1
Or see this region's nucleotide sequence