Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_2464

Experiment: MS_media no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_2463 and EX28DRAFT_2464 overlap by 4 nucleotidesEX28DRAFT_2464 and EX28DRAFT_2465 are separated by 0 nucleotidesEX28DRAFT_2465 and EX28DRAFT_2466 are separated by 28 nucleotides EX28DRAFT_2463: EX28DRAFT_2463 - Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component, at 2,492,307 to 2,494,721 _2463 EX28DRAFT_2464: EX28DRAFT_2464 - Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component, at 2,494,718 to 2,495,404 _2464 EX28DRAFT_2465: EX28DRAFT_2465 - Lysophospholipase L1 and related esterases, at 2,495,405 to 2,495,998 _2465 EX28DRAFT_2466: EX28DRAFT_2466 - Short-chain dehydrogenases of various substrate specificities, at 2,496,027 to 2,496,797 _2466 Position (kb) 2494 2495 2496Strain fitness (log2 ratio) -1 0 1 2at 2493.852 kb on - strand, within EX28DRAFT_2463at 2493.852 kb on - strand, within EX28DRAFT_2463at 2493.852 kb on - strand, within EX28DRAFT_2463at 2494.386 kb on + strand, within EX28DRAFT_2463at 2494.396 kb on + strand, within EX28DRAFT_2463at 2494.405 kb on + strand, within EX28DRAFT_2463at 2494.409 kb on + strand, within EX28DRAFT_2463at 2494.738 kb on + strandat 2495.113 kb on + strand, within EX28DRAFT_2464at 2495.327 kb on - strand, within EX28DRAFT_2464at 2495.786 kb on + strand, within EX28DRAFT_2465at 2495.786 kb on + strand, within EX28DRAFT_2465at 2495.787 kb on - strand, within EX28DRAFT_2465at 2495.787 kb on - strand, within EX28DRAFT_2465at 2495.798 kb on + strand, within EX28DRAFT_2465at 2495.801 kb on - strand, within EX28DRAFT_2465at 2495.822 kb on + strand, within EX28DRAFT_2465at 2495.822 kb on + strand, within EX28DRAFT_2465at 2495.823 kb on - strand, within EX28DRAFT_2465at 2495.823 kb on - strand, within EX28DRAFT_2465at 2495.945 kb on - strandat 2496.020 kb on + strandat 2496.021 kb on - strandat 2496.044 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MS_media no stress control
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2,493,852 - EX28DRAFT_2463 0.64 -0.1
2,493,852 - EX28DRAFT_2463 0.64 +0.2
2,493,852 - EX28DRAFT_2463 0.64 -0.4
2,494,386 + EX28DRAFT_2463 0.86 -0.2
2,494,396 + EX28DRAFT_2463 0.87 +0.4
2,494,405 + EX28DRAFT_2463 0.87 -0.1
2,494,409 + EX28DRAFT_2463 0.87 +0.0
2,494,738 + -0.1
2,495,113 + EX28DRAFT_2464 0.57 +0.6
2,495,327 - EX28DRAFT_2464 0.89 -0.0
2,495,786 + EX28DRAFT_2465 0.64 +2.1
2,495,786 + EX28DRAFT_2465 0.64 -0.5
2,495,787 - EX28DRAFT_2465 0.64 -0.5
2,495,787 - EX28DRAFT_2465 0.64 -0.2
2,495,798 + EX28DRAFT_2465 0.66 -0.3
2,495,801 - EX28DRAFT_2465 0.67 +0.6
2,495,822 + EX28DRAFT_2465 0.70 -0.0
2,495,822 + EX28DRAFT_2465 0.70 +0.5
2,495,823 - EX28DRAFT_2465 0.70 -0.2
2,495,823 - EX28DRAFT_2465 0.70 -0.1
2,495,945 - -0.4
2,496,020 + +0.2
2,496,021 - -1.5
2,496,044 - -0.8

Or see this region's nucleotide sequence