Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1860 and EX28DRAFT_1861 are separated by 93 nucleotides EX28DRAFT_1861 and EX28DRAFT_1862 are separated by 4 nucleotides EX28DRAFT_1862 and EX28DRAFT_1863 are separated by 58 nucleotides
EX28DRAFT_1860: EX28DRAFT_1860 - flagella basal body P-ring formation protein FlgA, at 1,875,381 to 1,876,040
_1860
EX28DRAFT_1861: EX28DRAFT_1861 - anti-sigma-28 factor, FlgM family, at 1,876,134 to 1,876,427
_1861
EX28DRAFT_1862: EX28DRAFT_1862 - Flagellar biosynthesis/type III secretory pathway chaperone, at 1,876,432 to 1,876,857
_1862
EX28DRAFT_1863: EX28DRAFT_1863 - murein biosynthesis integral membrane protein MurJ, at 1,876,916 to 1,878,451
_1863
Position (kb)
1876
1877 Strain fitness (log2 ratio)
-1
0
1 at 1875.497 kb on + strand, within EX28DRAFT_1860 at 1875.636 kb on + strand, within EX28DRAFT_1860 at 1875.640 kb on + strand, within EX28DRAFT_1860 at 1875.641 kb on - strand, within EX28DRAFT_1860 at 1875.641 kb on - strand, within EX28DRAFT_1860 at 1875.669 kb on + strand, within EX28DRAFT_1860 at 1875.669 kb on + strand, within EX28DRAFT_1860 at 1875.669 kb on + strand, within EX28DRAFT_1860 at 1875.669 kb on + strand, within EX28DRAFT_1860 at 1875.669 kb on + strand, within EX28DRAFT_1860 at 1875.669 kb on + strand, within EX28DRAFT_1860 at 1875.669 kb on + strand, within EX28DRAFT_1860 at 1875.670 kb on - strand, within EX28DRAFT_1860 at 1875.670 kb on - strand, within EX28DRAFT_1860 at 1875.912 kb on - strand, within EX28DRAFT_1860 at 1875.912 kb on - strand, within EX28DRAFT_1860 at 1876.022 kb on + strand at 1876.023 kb on - strand at 1876.036 kb on + strand at 1876.036 kb on + strand at 1876.037 kb on - strand at 1876.037 kb on - strand at 1876.037 kb on - strand at 1876.037 kb on - strand at 1876.075 kb on + strand at 1876.133 kb on + strand at 1876.421 kb on + strand at 1876.425 kb on + strand at 1876.426 kb on - strand at 1876.431 kb on + strand at 1876.432 kb on - strand at 1876.452 kb on - strand at 1876.594 kb on + strand, within EX28DRAFT_1862 at 1876.629 kb on + strand, within EX28DRAFT_1862 at 1876.746 kb on + strand, within EX28DRAFT_1862 at 1876.892 kb on + strand at 1876.893 kb on - strand at 1876.893 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 1,875,497 + EX28DRAFT_1860 0.18 -0.1 1,875,636 + EX28DRAFT_1860 0.39 +0.2 1,875,640 + EX28DRAFT_1860 0.39 +0.1 1,875,641 - EX28DRAFT_1860 0.39 -0.4 1,875,641 - EX28DRAFT_1860 0.39 +0.4 1,875,669 + EX28DRAFT_1860 0.44 +0.0 1,875,669 + EX28DRAFT_1860 0.44 +0.0 1,875,669 + EX28DRAFT_1860 0.44 -0.0 1,875,669 + EX28DRAFT_1860 0.44 +0.3 1,875,669 + EX28DRAFT_1860 0.44 +0.4 1,875,669 + EX28DRAFT_1860 0.44 -0.1 1,875,669 + EX28DRAFT_1860 0.44 -0.0 1,875,670 - EX28DRAFT_1860 0.44 -0.0 1,875,670 - EX28DRAFT_1860 0.44 -0.1 1,875,912 - EX28DRAFT_1860 0.80 -0.3 1,875,912 - EX28DRAFT_1860 0.80 +0.3 1,876,022 + +0.3 1,876,023 - -0.1 1,876,036 + +0.1 1,876,036 + +0.7 1,876,037 - -0.1 1,876,037 - -0.0 1,876,037 - +0.5 1,876,037 - -0.1 1,876,075 + +0.0 1,876,133 + +0.3 1,876,421 + +0.1 1,876,425 + -0.1 1,876,426 - -0.3 1,876,431 + -0.1 1,876,432 - +0.1 1,876,452 - -0.0 1,876,594 + EX28DRAFT_1862 0.38 +0.7 1,876,629 + EX28DRAFT_1862 0.46 +0.3 1,876,746 + EX28DRAFT_1862 0.74 +0.1 1,876,892 + -0.1 1,876,893 - -1.1 1,876,893 - -0.0
Or see this region's nucleotide sequence