Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1350 and EX28DRAFT_1351 are separated by 53 nucleotides EX28DRAFT_1351 and EX28DRAFT_1352 are separated by 389 nucleotides
EX28DRAFT_1350: EX28DRAFT_1350 - glyceraldehyde-3-phosphate dehydrogenase, type I, at 1,364,149 to 1,365,150
_1350
EX28DRAFT_1351: EX28DRAFT_1351 - Uncharacterized conserved protein, at 1,365,204 to 1,365,998
_1351
EX28DRAFT_1352: EX28DRAFT_1352 - Arabinose efflux permease, at 1,366,388 to 1,367,707
_1352
Position (kb)
1365
1366 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1364.299 kb on + strand, within EX28DRAFT_1350 at 1364.299 kb on + strand, within EX28DRAFT_1350 at 1364.299 kb on + strand, within EX28DRAFT_1350 at 1364.299 kb on + strand, within EX28DRAFT_1350 at 1364.417 kb on + strand, within EX28DRAFT_1350 at 1364.417 kb on + strand, within EX28DRAFT_1350 at 1364.422 kb on - strand, within EX28DRAFT_1350 at 1364.446 kb on + strand, within EX28DRAFT_1350 at 1364.448 kb on + strand, within EX28DRAFT_1350 at 1364.580 kb on + strand, within EX28DRAFT_1350 at 1364.580 kb on + strand, within EX28DRAFT_1350 at 1364.581 kb on - strand, within EX28DRAFT_1350 at 1364.581 kb on - strand, within EX28DRAFT_1350 at 1364.684 kb on - strand, within EX28DRAFT_1350 at 1364.758 kb on - strand, within EX28DRAFT_1350 at 1364.758 kb on - strand, within EX28DRAFT_1350 at 1364.949 kb on + strand, within EX28DRAFT_1350 at 1364.949 kb on + strand, within EX28DRAFT_1350 at 1364.950 kb on - strand, within EX28DRAFT_1350 at 1364.962 kb on + strand, within EX28DRAFT_1350 at 1365.097 kb on + strand at 1365.206 kb on - strand at 1365.211 kb on - strand at 1365.627 kb on - strand, within EX28DRAFT_1351 at 1365.760 kb on + strand, within EX28DRAFT_1351 at 1365.761 kb on - strand, within EX28DRAFT_1351 at 1365.945 kb on - strand at 1366.149 kb on + strand at 1366.149 kb on + strand at 1366.152 kb on + strand at 1366.153 kb on - strand at 1366.173 kb on + strand at 1366.195 kb on - strand at 1366.195 kb on - strand at 1366.195 kb on - strand at 1366.224 kb on - strand at 1366.224 kb on - strand at 1366.358 kb on + strand at 1366.358 kb on + strand at 1366.359 kb on - strand at 1366.359 kb on - strand at 1366.359 kb on - strand at 1366.359 kb on - strand at 1366.417 kb on - strand at 1366.519 kb on + strand at 1366.568 kb on + strand, within EX28DRAFT_1352 at 1366.568 kb on + strand, within EX28DRAFT_1352 at 1366.569 kb on - strand, within EX28DRAFT_1352 at 1366.628 kb on - strand, within EX28DRAFT_1352 at 1366.648 kb on + strand, within EX28DRAFT_1352 at 1366.718 kb on + strand, within EX28DRAFT_1352 at 1366.718 kb on + strand, within EX28DRAFT_1352 at 1366.718 kb on + strand, within EX28DRAFT_1352 at 1366.719 kb on - strand, within EX28DRAFT_1352 at 1366.765 kb on + strand, within EX28DRAFT_1352 at 1366.826 kb on + strand, within EX28DRAFT_1352
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 1,364,299 + EX28DRAFT_1350 0.15 -0.2 1,364,299 + EX28DRAFT_1350 0.15 +0.6 1,364,299 + EX28DRAFT_1350 0.15 -0.3 1,364,299 + EX28DRAFT_1350 0.15 +0.5 1,364,417 + EX28DRAFT_1350 0.27 +0.5 1,364,417 + EX28DRAFT_1350 0.27 -0.1 1,364,422 - EX28DRAFT_1350 0.27 +0.6 1,364,446 + EX28DRAFT_1350 0.30 -4.6 1,364,448 + EX28DRAFT_1350 0.30 +0.0 1,364,580 + EX28DRAFT_1350 0.43 +0.2 1,364,580 + EX28DRAFT_1350 0.43 -0.8 1,364,581 - EX28DRAFT_1350 0.43 -0.8 1,364,581 - EX28DRAFT_1350 0.43 -0.2 1,364,684 - EX28DRAFT_1350 0.53 -0.2 1,364,758 - EX28DRAFT_1350 0.61 +0.6 1,364,758 - EX28DRAFT_1350 0.61 -0.3 1,364,949 + EX28DRAFT_1350 0.80 -0.5 1,364,949 + EX28DRAFT_1350 0.80 -0.0 1,364,950 - EX28DRAFT_1350 0.80 +0.2 1,364,962 + EX28DRAFT_1350 0.81 +0.1 1,365,097 + +0.2 1,365,206 - -0.8 1,365,211 - +0.0 1,365,627 - EX28DRAFT_1351 0.53 +0.0 1,365,760 + EX28DRAFT_1351 0.70 +0.8 1,365,761 - EX28DRAFT_1351 0.70 +0.2 1,365,945 - -1.1 1,366,149 + -0.8 1,366,149 + -0.4 1,366,152 + -0.5 1,366,153 - -0.8 1,366,173 + -0.0 1,366,195 - -0.1 1,366,195 - -0.3 1,366,195 - +1.3 1,366,224 - +0.3 1,366,224 - +0.3 1,366,358 + +0.5 1,366,358 + +0.3 1,366,359 - -0.4 1,366,359 - +0.6 1,366,359 - -0.4 1,366,359 - -0.0 1,366,417 - +1.6 1,366,519 + -0.9 1,366,568 + EX28DRAFT_1352 0.14 +0.0 1,366,568 + EX28DRAFT_1352 0.14 -0.0 1,366,569 - EX28DRAFT_1352 0.14 -0.3 1,366,628 - EX28DRAFT_1352 0.18 +0.2 1,366,648 + EX28DRAFT_1352 0.20 +0.5 1,366,718 + EX28DRAFT_1352 0.25 -0.1 1,366,718 + EX28DRAFT_1352 0.25 +0.1 1,366,718 + EX28DRAFT_1352 0.25 -0.6 1,366,719 - EX28DRAFT_1352 0.25 -0.2 1,366,765 + EX28DRAFT_1352 0.29 +0.5 1,366,826 + EX28DRAFT_1352 0.33 -0.2
Or see this region's nucleotide sequence