Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1152 and EX28DRAFT_1153 are separated by 141 nucleotides EX28DRAFT_1153 and EX28DRAFT_1154 are separated by 77 nucleotides EX28DRAFT_1154 and EX28DRAFT_1155 are separated by 132 nucleotides
EX28DRAFT_1152: EX28DRAFT_1152 - Metallo-beta-lactamase superfamily, at 1,170,170 to 1,171,156
_1152
EX28DRAFT_1153: EX28DRAFT_1153 - 5'-nucleotidase, lipoprotein e(P4) family, at 1,171,298 to 1,172,056
_1153
EX28DRAFT_1154: EX28DRAFT_1154 - Acetyltransferases, at 1,172,134 to 1,172,661
_1154
EX28DRAFT_1155: EX28DRAFT_1155 - malto-oligosyltrehalose trehalohydrolase, at 1,172,794 to 1,174,581
_1155
Position (kb)
1171
1172
1173 Strain fitness (log2 ratio)
-2
-1
0
1 at 1170.360 kb on + strand, within EX28DRAFT_1152 at 1170.559 kb on - strand, within EX28DRAFT_1152 at 1170.591 kb on + strand, within EX28DRAFT_1152 at 1170.751 kb on + strand, within EX28DRAFT_1152 at 1171.151 kb on - strand at 1171.156 kb on + strand at 1171.157 kb on - strand at 1171.184 kb on + strand at 1171.194 kb on + strand at 1171.592 kb on + strand, within EX28DRAFT_1153 at 1171.616 kb on - strand, within EX28DRAFT_1153 at 1171.644 kb on + strand, within EX28DRAFT_1153 at 1171.644 kb on + strand, within EX28DRAFT_1153 at 1171.645 kb on - strand, within EX28DRAFT_1153 at 1171.750 kb on + strand, within EX28DRAFT_1153 at 1171.750 kb on + strand, within EX28DRAFT_1153 at 1171.750 kb on + strand, within EX28DRAFT_1153 at 1171.751 kb on - strand, within EX28DRAFT_1153 at 1172.022 kb on - strand at 1172.147 kb on + strand at 1172.147 kb on + strand at 1172.147 kb on + strand at 1172.148 kb on - strand at 1172.148 kb on - strand at 1172.148 kb on - strand at 1172.192 kb on + strand, within EX28DRAFT_1154 at 1172.192 kb on + strand, within EX28DRAFT_1154 at 1172.368 kb on + strand, within EX28DRAFT_1154 at 1172.397 kb on + strand, within EX28DRAFT_1154 at 1172.421 kb on + strand, within EX28DRAFT_1154 at 1172.422 kb on - strand, within EX28DRAFT_1154 at 1172.422 kb on - strand, within EX28DRAFT_1154 at 1172.554 kb on + strand, within EX28DRAFT_1154 at 1172.662 kb on - strand at 1172.662 kb on - strand at 1172.744 kb on + strand at 1172.744 kb on + strand at 1172.745 kb on - strand at 1172.752 kb on + strand at 1172.753 kb on - strand at 1172.766 kb on + strand at 1172.852 kb on + strand at 1172.853 kb on - strand at 1172.890 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 1,170,360 + EX28DRAFT_1152 0.19 -1.3 1,170,559 - EX28DRAFT_1152 0.39 +0.3 1,170,591 + EX28DRAFT_1152 0.43 +0.1 1,170,751 + EX28DRAFT_1152 0.59 +0.1 1,171,151 - +1.3 1,171,156 + -0.3 1,171,157 - -0.3 1,171,184 + +0.9 1,171,194 + +0.0 1,171,592 + EX28DRAFT_1153 0.39 +0.2 1,171,616 - EX28DRAFT_1153 0.42 -0.9 1,171,644 + EX28DRAFT_1153 0.46 +0.5 1,171,644 + EX28DRAFT_1153 0.46 -0.1 1,171,645 - EX28DRAFT_1153 0.46 +0.5 1,171,750 + EX28DRAFT_1153 0.60 +0.1 1,171,750 + EX28DRAFT_1153 0.60 +0.8 1,171,750 + EX28DRAFT_1153 0.60 +0.6 1,171,751 - EX28DRAFT_1153 0.60 +0.8 1,172,022 - -0.2 1,172,147 + +0.2 1,172,147 + -0.5 1,172,147 + -0.3 1,172,148 - +0.4 1,172,148 - +0.3 1,172,148 - +1.1 1,172,192 + EX28DRAFT_1154 0.11 -1.9 1,172,192 + EX28DRAFT_1154 0.11 -0.7 1,172,368 + EX28DRAFT_1154 0.44 -0.2 1,172,397 + EX28DRAFT_1154 0.50 +0.7 1,172,421 + EX28DRAFT_1154 0.54 +0.0 1,172,422 - EX28DRAFT_1154 0.55 -0.3 1,172,422 - EX28DRAFT_1154 0.55 -0.5 1,172,554 + EX28DRAFT_1154 0.80 -0.2 1,172,662 - +0.9 1,172,662 - +0.1 1,172,744 + -0.0 1,172,744 + -0.2 1,172,745 - -0.4 1,172,752 + +0.1 1,172,753 - +0.4 1,172,766 + -0.1 1,172,852 + -0.5 1,172,853 - +0.4 1,172,890 - -0.4
Or see this region's nucleotide sequence