Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_1151

Experiment: MS_media no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_1149 and EX28DRAFT_1150 are separated by 112 nucleotidesEX28DRAFT_1150 and EX28DRAFT_1151 overlap by 10 nucleotidesEX28DRAFT_1151 and EX28DRAFT_1152 overlap by 53 nucleotides EX28DRAFT_1149: EX28DRAFT_1149 - 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases, at 1,166,782 to 1,168,269 _1149 EX28DRAFT_1150: EX28DRAFT_1150 - Transcriptional regulator, at 1,168,382 to 1,169,266 _1150 EX28DRAFT_1151: EX28DRAFT_1151 - Transcriptional regulator, at 1,169,257 to 1,170,222 _1151 EX28DRAFT_1152: EX28DRAFT_1152 - Metallo-beta-lactamase superfamily, at 1,170,170 to 1,171,156 _1152 Position (kb) 1169 1170 1171Strain fitness (log2 ratio) -2 -1 0 1 2at 1168.290 kb on + strandat 1168.489 kb on - strand, within EX28DRAFT_1150at 1168.660 kb on - strand, within EX28DRAFT_1150at 1168.726 kb on + strand, within EX28DRAFT_1150at 1168.744 kb on + strand, within EX28DRAFT_1150at 1168.898 kb on + strand, within EX28DRAFT_1150at 1169.003 kb on + strand, within EX28DRAFT_1150at 1169.003 kb on + strand, within EX28DRAFT_1150at 1169.340 kb on - strandat 1169.474 kb on + strand, within EX28DRAFT_1151at 1169.474 kb on + strand, within EX28DRAFT_1151at 1169.475 kb on - strand, within EX28DRAFT_1151at 1169.714 kb on + strand, within EX28DRAFT_1151at 1169.714 kb on + strand, within EX28DRAFT_1151at 1169.715 kb on - strand, within EX28DRAFT_1151at 1169.718 kb on + strand, within EX28DRAFT_1151at 1170.142 kb on + strandat 1170.142 kb on + strandat 1170.143 kb on - strandat 1170.143 kb on - strandat 1170.143 kb on - strandat 1170.143 kb on - strandat 1170.143 kb on - strandat 1170.171 kb on + strandat 1170.172 kb on - strandat 1170.199 kb on + strandat 1170.200 kb on - strandat 1170.202 kb on - strandat 1170.202 kb on - strandat 1170.202 kb on - strandat 1170.202 kb on - strandat 1170.250 kb on - strandat 1170.250 kb on - strandat 1170.360 kb on + strand, within EX28DRAFT_1152at 1170.559 kb on - strand, within EX28DRAFT_1152at 1170.591 kb on + strand, within EX28DRAFT_1152at 1170.751 kb on + strand, within EX28DRAFT_1152at 1171.151 kb on - strandat 1171.156 kb on + strandat 1171.157 kb on - strandat 1171.184 kb on + strandat 1171.194 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MS_media no stress control
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1,168,290 + -0.5
1,168,489 - EX28DRAFT_1150 0.12 +0.2
1,168,660 - EX28DRAFT_1150 0.31 -0.2
1,168,726 + EX28DRAFT_1150 0.39 +0.1
1,168,744 + EX28DRAFT_1150 0.41 -0.2
1,168,898 + EX28DRAFT_1150 0.58 +0.2
1,169,003 + EX28DRAFT_1150 0.70 +0.8
1,169,003 + EX28DRAFT_1150 0.70 +0.1
1,169,340 - -0.4
1,169,474 + EX28DRAFT_1151 0.22 +0.8
1,169,474 + EX28DRAFT_1151 0.22 -0.3
1,169,475 - EX28DRAFT_1151 0.23 +2.3
1,169,714 + EX28DRAFT_1151 0.47 +0.8
1,169,714 + EX28DRAFT_1151 0.47 -0.5
1,169,715 - EX28DRAFT_1151 0.47 -0.3
1,169,718 + EX28DRAFT_1151 0.48 +0.6
1,170,142 + +0.3
1,170,142 + -0.3
1,170,143 - -0.2
1,170,143 - +0.1
1,170,143 - +0.6
1,170,143 - +0.3
1,170,143 - +0.1
1,170,171 + -0.0
1,170,172 - -0.0
1,170,199 + +1.6
1,170,200 - -0.6
1,170,202 - -0.9
1,170,202 - -0.3
1,170,202 - -0.5
1,170,202 - -0.6
1,170,250 - -2.3
1,170,250 - -1.4
1,170,360 + EX28DRAFT_1152 0.19 -1.3
1,170,559 - EX28DRAFT_1152 0.39 +0.3
1,170,591 + EX28DRAFT_1152 0.43 +0.1
1,170,751 + EX28DRAFT_1152 0.59 +0.1
1,171,151 - +1.3
1,171,156 + -0.3
1,171,157 - -0.3
1,171,184 + +0.9
1,171,194 + +0.0

Or see this region's nucleotide sequence