Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0863 and EX28DRAFT_0864 are separated by 549 nucleotides EX28DRAFT_0864 and EX28DRAFT_0865 are separated by 65 nucleotides
EX28DRAFT_0863: EX28DRAFT_0863 - DNA-binding protein H-NS, at 874,579 to 874,992
_0863
EX28DRAFT_0864: EX28DRAFT_0864 - thymidine kinase (EC 2.7.1.21), at 875,542 to 876,156
_0864
EX28DRAFT_0865: EX28DRAFT_0865 - Alcohol dehydrogenase, class IV, at 876,222 to 878,900
_0865
Position (kb) 875
876
877 Strain fitness (log2 ratio) -1
0
1 at 875.097 kb on + strand at 875.101 kb on + strand at 875.101 kb on + strand at 875.110 kb on + strand at 875.131 kb on - strand at 875.257 kb on - strand at 875.279 kb on - strand at 875.279 kb on - strand at 875.289 kb on + strand at 875.296 kb on + strand at 875.297 kb on - strand at 875.361 kb on - strand at 875.363 kb on - strand at 875.390 kb on - strand at 875.464 kb on + strand at 875.554 kb on + strand at 875.554 kb on + strand at 875.555 kb on - strand at 875.618 kb on - strand, within EX28DRAFT_0864 at 875.647 kb on + strand, within EX28DRAFT_0864 at 875.648 kb on - strand, within EX28DRAFT_0864 at 875.650 kb on - strand, within EX28DRAFT_0864 at 875.761 kb on - strand, within EX28DRAFT_0864 at 876.056 kb on + strand, within EX28DRAFT_0864 at 876.057 kb on - strand, within EX28DRAFT_0864 at 876.057 kb on - strand, within EX28DRAFT_0864 at 876.073 kb on + strand, within EX28DRAFT_0864 at 876.097 kb on + strand at 876.098 kb on - strand at 876.100 kb on - strand at 876.171 kb on + strand at 876.171 kb on + strand at 876.220 kb on - strand at 876.220 kb on - strand at 876.314 kb on - strand at 876.377 kb on + strand at 876.378 kb on - strand at 876.410 kb on + strand at 876.410 kb on + strand at 876.410 kb on + strand at 876.411 kb on - strand at 876.411 kb on - strand at 876.411 kb on - strand at 876.414 kb on + strand at 876.415 kb on - strand at 876.415 kb on - strand at 876.604 kb on + strand, within EX28DRAFT_0865 at 876.605 kb on - strand, within EX28DRAFT_0865 at 876.648 kb on - strand, within EX28DRAFT_0865 at 876.728 kb on + strand, within EX28DRAFT_0865 at 876.779 kb on + strand, within EX28DRAFT_0865 at 876.779 kb on + strand, within EX28DRAFT_0865 at 876.916 kb on + strand, within EX28DRAFT_0865 at 876.916 kb on + strand, within EX28DRAFT_0865 at 876.917 kb on - strand, within EX28DRAFT_0865 at 876.917 kb on - strand, within EX28DRAFT_0865 at 877.071 kb on + strand, within EX28DRAFT_0865
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 875,097 + +0.5 875,101 + +0.9 875,101 + +0.5 875,110 + +0.7 875,131 - +0.1 875,257 - +1.2 875,279 - +0.9 875,279 - +0.3 875,289 + -0.2 875,296 + -0.0 875,297 - +0.8 875,361 - +0.5 875,363 - +0.3 875,390 - +0.3 875,464 + -0.4 875,554 + -1.6 875,554 + +0.1 875,555 - -0.3 875,618 - EX28DRAFT_0864 0.12 +0.7 875,647 + EX28DRAFT_0864 0.17 +0.6 875,648 - EX28DRAFT_0864 0.17 -0.1 875,650 - EX28DRAFT_0864 0.18 +1.1 875,761 - EX28DRAFT_0864 0.36 -0.1 876,056 + EX28DRAFT_0864 0.84 +0.8 876,057 - EX28DRAFT_0864 0.84 +0.7 876,057 - EX28DRAFT_0864 0.84 -0.5 876,073 + EX28DRAFT_0864 0.86 +0.1 876,097 + -0.3 876,098 - -0.9 876,100 - -0.3 876,171 + -0.7 876,171 + +0.2 876,220 - +0.8 876,220 - +0.1 876,314 - -0.5 876,377 + -0.1 876,378 - +0.4 876,410 + -0.4 876,410 + -0.3 876,410 + -0.8 876,411 - +0.4 876,411 - +0.3 876,411 - -0.2 876,414 + -0.3 876,415 - -0.3 876,415 - +0.2 876,604 + EX28DRAFT_0865 0.14 +0.1 876,605 - EX28DRAFT_0865 0.14 -0.6 876,648 - EX28DRAFT_0865 0.16 -0.7 876,728 + EX28DRAFT_0865 0.19 -0.4 876,779 + EX28DRAFT_0865 0.21 +0.0 876,779 + EX28DRAFT_0865 0.21 +0.3 876,916 + EX28DRAFT_0865 0.26 -0.1 876,916 + EX28DRAFT_0865 0.26 -0.4 876,917 - EX28DRAFT_0865 0.26 +0.6 876,917 - EX28DRAFT_0865 0.26 -0.4 877,071 + EX28DRAFT_0865 0.32 -0.5
Or see this region's nucleotide sequence