Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0363 and EX28DRAFT_0364 overlap by 1 nucleotides EX28DRAFT_0364 and EX28DRAFT_0365 are separated by 69 nucleotides
EX28DRAFT_0363: EX28DRAFT_0363 - O-6-methylguanine DNA methyltransferase, at 333,506 to 334,564
_0363
EX28DRAFT_0364: EX28DRAFT_0364 - Alkylated DNA repair protein, at 334,564 to 335,220
_0364
EX28DRAFT_0365: EX28DRAFT_0365 - cyclic peptide transporter, at 335,290 to 336,933
_0365
Position (kb) 334
335
336 Strain fitness (log2 ratio) -1
0
1
2 at 333.865 kb on + strand, within EX28DRAFT_0363 at 333.998 kb on + strand, within EX28DRAFT_0363 at 333.998 kb on + strand, within EX28DRAFT_0363 at 333.998 kb on + strand, within EX28DRAFT_0363 at 333.999 kb on - strand, within EX28DRAFT_0363 at 333.999 kb on - strand, within EX28DRAFT_0363 at 334.071 kb on - strand, within EX28DRAFT_0363 at 334.079 kb on - strand, within EX28DRAFT_0363 at 334.203 kb on - strand, within EX28DRAFT_0363 at 334.273 kb on - strand, within EX28DRAFT_0363 at 334.790 kb on - strand, within EX28DRAFT_0364 at 334.877 kb on + strand, within EX28DRAFT_0364 at 334.889 kb on - strand, within EX28DRAFT_0364 at 334.990 kb on - strand, within EX28DRAFT_0364 at 335.179 kb on - strand at 335.218 kb on + strand at 335.297 kb on + strand at 335.298 kb on - strand at 335.342 kb on + strand at 335.343 kb on - strand at 335.569 kb on - strand, within EX28DRAFT_0365 at 335.577 kb on - strand, within EX28DRAFT_0365 at 335.643 kb on + strand, within EX28DRAFT_0365 at 335.710 kb on + strand, within EX28DRAFT_0365 at 335.785 kb on - strand, within EX28DRAFT_0365 at 335.803 kb on + strand, within EX28DRAFT_0365 at 335.803 kb on + strand, within EX28DRAFT_0365 at 335.838 kb on + strand, within EX28DRAFT_0365 at 335.838 kb on + strand, within EX28DRAFT_0365 at 335.838 kb on + strand, within EX28DRAFT_0365 at 335.838 kb on + strand, within EX28DRAFT_0365 at 335.839 kb on - strand, within EX28DRAFT_0365 at 335.846 kb on - strand, within EX28DRAFT_0365 at 335.847 kb on + strand, within EX28DRAFT_0365 at 335.864 kb on + strand, within EX28DRAFT_0365 at 335.913 kb on + strand, within EX28DRAFT_0365 at 335.913 kb on + strand, within EX28DRAFT_0365 at 335.920 kb on - strand, within EX28DRAFT_0365 at 335.929 kb on + strand, within EX28DRAFT_0365 at 335.929 kb on + strand, within EX28DRAFT_0365 at 335.929 kb on + strand, within EX28DRAFT_0365 at 335.930 kb on - strand, within EX28DRAFT_0365 at 335.931 kb on + strand, within EX28DRAFT_0365 at 335.961 kb on + strand, within EX28DRAFT_0365 at 335.961 kb on + strand, within EX28DRAFT_0365 at 335.961 kb on + strand, within EX28DRAFT_0365 at 335.962 kb on - strand, within EX28DRAFT_0365 at 335.962 kb on - strand, within EX28DRAFT_0365 at 335.962 kb on - strand, within EX28DRAFT_0365 at 335.964 kb on + strand, within EX28DRAFT_0365 at 336.012 kb on + strand, within EX28DRAFT_0365 at 336.012 kb on + strand, within EX28DRAFT_0365 at 336.038 kb on + strand, within EX28DRAFT_0365 at 336.039 kb on - strand, within EX28DRAFT_0365 at 336.177 kb on + strand, within EX28DRAFT_0365 at 336.177 kb on + strand, within EX28DRAFT_0365 at 336.178 kb on - strand, within EX28DRAFT_0365 at 336.178 kb on - strand, within EX28DRAFT_0365 at 336.210 kb on + strand, within EX28DRAFT_0365
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 333,865 + EX28DRAFT_0363 0.34 +0.0 333,998 + EX28DRAFT_0363 0.46 +0.5 333,998 + EX28DRAFT_0363 0.46 -0.5 333,998 + EX28DRAFT_0363 0.46 -0.1 333,999 - EX28DRAFT_0363 0.47 +0.2 333,999 - EX28DRAFT_0363 0.47 +0.3 334,071 - EX28DRAFT_0363 0.53 +0.1 334,079 - EX28DRAFT_0363 0.54 -0.7 334,203 - EX28DRAFT_0363 0.66 +0.9 334,273 - EX28DRAFT_0363 0.72 -0.3 334,790 - EX28DRAFT_0364 0.34 +0.3 334,877 + EX28DRAFT_0364 0.48 +0.0 334,889 - EX28DRAFT_0364 0.49 +1.0 334,990 - EX28DRAFT_0364 0.65 +0.5 335,179 - +0.2 335,218 + +0.4 335,297 + +0.3 335,298 - +0.3 335,342 + +0.5 335,343 - +0.2 335,569 - EX28DRAFT_0365 0.17 +2.6 335,577 - EX28DRAFT_0365 0.17 -0.9 335,643 + EX28DRAFT_0365 0.21 +0.4 335,710 + EX28DRAFT_0365 0.26 -0.1 335,785 - EX28DRAFT_0365 0.30 +0.3 335,803 + EX28DRAFT_0365 0.31 +0.3 335,803 + EX28DRAFT_0365 0.31 +0.8 335,838 + EX28DRAFT_0365 0.33 +0.5 335,838 + EX28DRAFT_0365 0.33 -1.4 335,838 + EX28DRAFT_0365 0.33 -0.5 335,838 + EX28DRAFT_0365 0.33 -0.2 335,839 - EX28DRAFT_0365 0.33 -0.3 335,846 - EX28DRAFT_0365 0.34 -0.9 335,847 + EX28DRAFT_0365 0.34 +0.1 335,864 + EX28DRAFT_0365 0.35 +0.1 335,913 + EX28DRAFT_0365 0.38 +0.1 335,913 + EX28DRAFT_0365 0.38 +0.2 335,920 - EX28DRAFT_0365 0.38 -0.3 335,929 + EX28DRAFT_0365 0.39 +0.0 335,929 + EX28DRAFT_0365 0.39 +0.1 335,929 + EX28DRAFT_0365 0.39 +0.6 335,930 - EX28DRAFT_0365 0.39 +0.6 335,931 + EX28DRAFT_0365 0.39 +0.5 335,961 + EX28DRAFT_0365 0.41 -0.4 335,961 + EX28DRAFT_0365 0.41 +1.0 335,961 + EX28DRAFT_0365 0.41 +0.0 335,962 - EX28DRAFT_0365 0.41 -0.4 335,962 - EX28DRAFT_0365 0.41 -0.1 335,962 - EX28DRAFT_0365 0.41 -0.3 335,964 + EX28DRAFT_0365 0.41 -0.0 336,012 + EX28DRAFT_0365 0.44 -0.0 336,012 + EX28DRAFT_0365 0.44 +0.1 336,038 + EX28DRAFT_0365 0.45 -0.3 336,039 - EX28DRAFT_0365 0.46 +2.4 336,177 + EX28DRAFT_0365 0.54 -0.1 336,177 + EX28DRAFT_0365 0.54 -0.2 336,178 - EX28DRAFT_0365 0.54 -0.4 336,178 - EX28DRAFT_0365 0.54 -0.2 336,210 + EX28DRAFT_0365 0.56 -0.2
Or see this region's nucleotide sequence