Strain Fitness in Escherichia coli BL21 around ECD_02778

Experiment: NophageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02777 and ECD_02778 are separated by 108 nucleotidesECD_02778 and ECD_02779 overlap by 1 nucleotidesECD_02779 and ECD_02780 are separated by 183 nucleotides ECD_02777: ECD_02777 - glutathione synthetase, at 2,922,736 to 2,923,686 _02777 ECD_02778: ECD_02778 - uncharacterized protein, at 2,923,795 to 2,924,358 _02778 ECD_02779: ECD_02779 - putative Holliday junction resolvase, at 2,924,358 to 2,924,774 _02779 ECD_02780: ECD_02780 - putative PilT family AAA+ ATPase, at 2,924,958 to 2,925,938 _02780 Position (kb) 2923 2924 2925Strain fitness (log2 ratio) -2 -1 0 1 2at 2922.805 kb on - strandat 2922.844 kb on + strand, within ECD_02777at 2922.844 kb on + strand, within ECD_02777at 2922.845 kb on - strand, within ECD_02777at 2922.846 kb on + strand, within ECD_02777at 2922.846 kb on + strand, within ECD_02777at 2922.847 kb on - strand, within ECD_02777at 2922.847 kb on - strand, within ECD_02777at 2922.922 kb on + strand, within ECD_02777at 2922.922 kb on + strand, within ECD_02777at 2922.993 kb on + strand, within ECD_02777at 2923.020 kb on + strand, within ECD_02777at 2923.020 kb on + strand, within ECD_02777at 2923.024 kb on + strand, within ECD_02777at 2923.024 kb on + strand, within ECD_02777at 2923.025 kb on - strand, within ECD_02777at 2923.033 kb on + strand, within ECD_02777at 2923.034 kb on - strand, within ECD_02777at 2923.034 kb on - strand, within ECD_02777at 2923.035 kb on + strand, within ECD_02777at 2923.075 kb on - strand, within ECD_02777at 2923.175 kb on + strand, within ECD_02777at 2923.212 kb on + strand, within ECD_02777at 2923.212 kb on + strand, within ECD_02777at 2923.396 kb on + strand, within ECD_02777at 2923.673 kb on + strandat 2923.748 kb on + strandat 2923.818 kb on + strandat 2923.867 kb on + strand, within ECD_02778at 2923.881 kb on + strand, within ECD_02778at 2923.881 kb on + strand, within ECD_02778at 2923.881 kb on + strand, within ECD_02778at 2923.884 kb on + strand, within ECD_02778at 2924.165 kb on + strand, within ECD_02778at 2924.259 kb on + strand, within ECD_02778at 2924.371 kb on + strandat 2924.772 kb on + strandat 2924.772 kb on + strandat 2924.773 kb on - strandat 2924.800 kb on + strandat 2924.804 kb on + strandat 2924.804 kb on + strandat 2924.804 kb on + strandat 2924.805 kb on - strandat 2924.805 kb on - strandat 2924.807 kb on + strandat 2924.873 kb on + strandat 2924.873 kb on + strandat 2924.874 kb on - strandat 2924.882 kb on + strandat 2924.911 kb on + strandat 2924.911 kb on + strandat 2924.911 kb on + strandat 2924.912 kb on - strandat 2924.923 kb on - strandat 2924.923 kb on - strandat 2924.931 kb on + strandat 2924.931 kb on + strandat 2924.990 kb on - strandat 2925.033 kb on - strandat 2925.260 kb on + strand, within ECD_02780at 2925.261 kb on - strand, within ECD_02780at 2925.264 kb on + strand, within ECD_02780

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Per-strain Table

Position Strand Gene LocusTag Fraction NophageControl
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2,922,805 - -1.5
2,922,844 + ECD_02777 0.11 -0.2
2,922,844 + ECD_02777 0.11 -2.2
2,922,845 - ECD_02777 0.11 +0.2
2,922,846 + ECD_02777 0.12 -0.2
2,922,846 + ECD_02777 0.12 -0.6
2,922,847 - ECD_02777 0.12 -0.7
2,922,847 - ECD_02777 0.12 -0.4
2,922,922 + ECD_02777 0.20 +1.0
2,922,922 + ECD_02777 0.20 -1.4
2,922,993 + ECD_02777 0.27 -2.0
2,923,020 + ECD_02777 0.30 +0.8
2,923,020 + ECD_02777 0.30 +0.1
2,923,024 + ECD_02777 0.30 -1.2
2,923,024 + ECD_02777 0.30 -0.7
2,923,025 - ECD_02777 0.30 -0.4
2,923,033 + ECD_02777 0.31 -1.3
2,923,034 - ECD_02777 0.31 -0.7
2,923,034 - ECD_02777 0.31 -1.5
2,923,035 + ECD_02777 0.31 -0.9
2,923,075 - ECD_02777 0.36 -1.5
2,923,175 + ECD_02777 0.46 +0.2
2,923,212 + ECD_02777 0.50 -1.8
2,923,212 + ECD_02777 0.50 -1.1
2,923,396 + ECD_02777 0.69 -0.5
2,923,673 + -0.7
2,923,748 + -0.3
2,923,818 + -0.6
2,923,867 + ECD_02778 0.13 +0.1
2,923,881 + ECD_02778 0.15 +2.0
2,923,881 + ECD_02778 0.15 -0.7
2,923,881 + ECD_02778 0.15 -0.7
2,923,884 + ECD_02778 0.16 +0.3
2,924,165 + ECD_02778 0.66 +0.2
2,924,259 + ECD_02778 0.82 -0.9
2,924,371 + -0.7
2,924,772 + -0.2
2,924,772 + +0.5
2,924,773 - -0.7
2,924,800 + +0.0
2,924,804 + -0.4
2,924,804 + +0.4
2,924,804 + +0.5
2,924,805 - +0.0
2,924,805 - -0.1
2,924,807 + -1.1
2,924,873 + -1.2
2,924,873 + +0.2
2,924,874 - -0.1
2,924,882 + +0.4
2,924,911 + -0.7
2,924,911 + +0.7
2,924,911 + -0.5
2,924,912 - -1.2
2,924,923 - +0.4
2,924,923 - +1.6
2,924,931 + +0.7
2,924,931 + -0.3
2,924,990 - +1.5
2,925,033 - -0.2
2,925,260 + ECD_02780 0.31 -1.3
2,925,261 - ECD_02780 0.31 -0.5
2,925,264 + ECD_02780 0.31 -1.3

Or see this region's nucleotide sequence