Strain Fitness in Escherichia coli BL21 around ECD_02456

Experiment: NophageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02455 and ECD_02456 are separated by 55 nucleotidesECD_02456 and ECD_04345 are separated by 193 nucleotidesECD_04345 and ECD_04346 overlap by 4 nucleotidesECD_04346 and ECD_02457 are separated by 271 nucleotides ECD_02455: ECD_02455 - putative DNA-binding transcriptional regulator, at 2,565,358 to 2,566,206 _02455 ECD_02456: ECD_02456 - putative 4Fe-4S cluster-containing protein, at 2,566,262 to 2,566,522 _02456 ECD_04345: ECD_04345 - toxic membrane protein, at 2,566,716 to 2,566,796 _04345 ECD_04346: ECD_04346 - hypothetical protein, at 2,566,793 to 2,566,945 _04346 ECD_02457: ECD_02457 - holo-[acyl-carrier-protein] synthase 1, at 2,567,217 to 2,567,597 _02457 Position (kb) 2566 2567Strain fitness (log2 ratio) -2 -1 0 1 2at 2565.369 kb on - strandat 2565.437 kb on + strandat 2565.437 kb on + strandat 2565.536 kb on - strand, within ECD_02455at 2565.555 kb on + strand, within ECD_02455at 2565.688 kb on + strand, within ECD_02455at 2565.688 kb on + strand, within ECD_02455at 2565.688 kb on + strand, within ECD_02455at 2565.688 kb on + strand, within ECD_02455at 2565.689 kb on - strand, within ECD_02455at 2565.689 kb on - strand, within ECD_02455at 2565.705 kb on + strand, within ECD_02455at 2565.708 kb on + strand, within ECD_02455at 2565.855 kb on + strand, within ECD_02455at 2565.878 kb on + strand, within ECD_02455at 2566.043 kb on - strand, within ECD_02455at 2566.044 kb on + strand, within ECD_02455at 2566.045 kb on - strand, within ECD_02455at 2566.045 kb on - strand, within ECD_02455at 2566.261 kb on + strandat 2566.369 kb on + strand, within ECD_02456at 2566.370 kb on - strand, within ECD_02456at 2566.436 kb on - strand, within ECD_02456at 2566.551 kb on + strandat 2566.654 kb on + strandat 2566.841 kb on + strand, within ECD_04346at 2566.841 kb on + strand, within ECD_04346at 2566.841 kb on + strand, within ECD_04346at 2566.992 kb on + strandat 2567.108 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NophageControl
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2,565,369 - +0.1
2,565,437 + +1.0
2,565,437 + -0.8
2,565,536 - ECD_02455 0.21 +0.7
2,565,555 + ECD_02455 0.23 -2.5
2,565,688 + ECD_02455 0.39 +0.7
2,565,688 + ECD_02455 0.39 +0.5
2,565,688 + ECD_02455 0.39 -0.2
2,565,688 + ECD_02455 0.39 +0.1
2,565,689 - ECD_02455 0.39 +0.1
2,565,689 - ECD_02455 0.39 +0.6
2,565,705 + ECD_02455 0.41 +0.9
2,565,708 + ECD_02455 0.41 -0.2
2,565,855 + ECD_02455 0.59 -0.3
2,565,878 + ECD_02455 0.61 -0.2
2,566,043 - ECD_02455 0.81 -0.4
2,566,044 + ECD_02455 0.81 +0.5
2,566,045 - ECD_02455 0.81 +0.5
2,566,045 - ECD_02455 0.81 +1.9
2,566,261 + +0.5
2,566,369 + ECD_02456 0.41 -0.2
2,566,370 - ECD_02456 0.41 -1.9
2,566,436 - ECD_02456 0.67 +0.7
2,566,551 + +0.2
2,566,654 + +0.7
2,566,841 + ECD_04346 0.31 +1.4
2,566,841 + ECD_04346 0.31 -0.5
2,566,841 + ECD_04346 0.31 -0.7
2,566,992 + -0.2
2,567,108 + -0.2

Or see this region's nucleotide sequence