Strain Fitness in Escherichia coli BL21 around ECD_02198

Experiment: NophageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02198 and ECD_02199 are separated by 86 nucleotidesECD_02199 and ECD_02200 overlap by 4 nucleotides ECD_02198: ECD_02198 - DUF1877 family protein, at 2,275,218 to 2,275,721 _02198 ECD_02199: ECD_02199 - putative ISRSO11-transposase OrfA protein, at 2,275,808 to 2,276,329 _02199 ECD_02200: ECD_02200 - YadA protein, at 2,276,326 to 2,277,165 _02200 Position (kb) 2275 2276Strain fitness (log2 ratio) -3 -2 -1 0 1at 2274.683 kb on + strandat 2275.459 kb on + strand, within ECD_02198at 2275.459 kb on + strand, within ECD_02198at 2275.612 kb on + strand, within ECD_02198at 2275.612 kb on + strand, within ECD_02198at 2275.676 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NophageControl
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2,274,683 + -2.8
2,275,459 + ECD_02198 0.48 -0.2
2,275,459 + ECD_02198 0.48 +0.6
2,275,612 + ECD_02198 0.78 +0.7
2,275,612 + ECD_02198 0.78 +0.2
2,275,676 + -0.6

Or see this region's nucleotide sequence