Strain Fitness in Escherichia coli BL21 around ECD_01754

Experiment: NophageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01753 and ECD_01754 are separated by 146 nucleotidesECD_01754 and ECD_01755 are separated by 180 nucleotides ECD_01753: ECD_01753 - UPF0229 family protein, at 1,813,332 to 1,814,615 _01753 ECD_01754: ECD_01754 - putative membrane-anchored diguanylate cyclase, at 1,814,762 to 1,816,237 _01754 ECD_01755: ECD_01755 - putative diguanylate cyclase, at 1,816,418 to 1,817,908 _01755 Position (kb) 1814 1815 1816 1817Strain fitness (log2 ratio) -1 0 1at 1813.775 kb on + strand, within ECD_01753at 1814.452 kb on - strand, within ECD_01753at 1816.432 kb on + strandat 1816.576 kb on + strand, within ECD_01755at 1816.580 kb on + strand, within ECD_01755

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Per-strain Table

Position Strand Gene LocusTag Fraction NophageControl
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1,813,775 + ECD_01753 0.35 +1.4
1,814,452 - ECD_01753 0.87 +1.0
1,816,432 + -0.8
1,816,576 + ECD_01755 0.11 -1.0
1,816,580 + ECD_01755 0.11 +1.0

Or see this region's nucleotide sequence