Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_20415 and CA264_20420 are separated by 171 nucleotides CA264_20420 and CA264_20425 overlap by 4 nucleotides CA264_20425 and CA264_20430 are separated by 2 nucleotides CA264_20430 and CA264_20435 are separated by 244 nucleotides
CA264_20415: CA264_20415 - 2-iminoacetate synthase ThiH, at 4,704,793 to 4,705,902
_20415
CA264_20420: CA264_20420 - thiazole synthase, at 4,706,074 to 4,706,847
_20420
CA264_20425: CA264_20425 - thiamine phosphate synthase, at 4,706,844 to 4,707,488
_20425
CA264_20430: CA264_20430 - hydroxymethylpyrimidine/phosphomethylpyrimidine kinase, at 4,707,491 to 4,708,243
_20430
CA264_20435: CA264_20435 - phosphomethylpyrimidine synthase ThiC, at 4,708,488 to 4,710,350
_20435
Position (kb)
4706
4707
4708 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4705.845 kb on - strand at 4705.885 kb on + strand at 4705.885 kb on + strand at 4705.885 kb on + strand at 4705.887 kb on + strand at 4705.888 kb on - strand at 4705.894 kb on - strand at 4705.906 kb on + strand at 4705.906 kb on + strand at 4705.906 kb on + strand at 4705.907 kb on - strand at 4705.911 kb on - strand at 4705.914 kb on + strand at 4705.917 kb on + strand at 4705.920 kb on - strand at 4705.943 kb on - strand at 4705.982 kb on - strand at 4706.012 kb on + strand at 4706.320 kb on - strand, within CA264_20420 at 4706.329 kb on + strand, within CA264_20420 at 4706.330 kb on - strand, within CA264_20420 at 4706.330 kb on - strand, within CA264_20420 at 4706.456 kb on + strand, within CA264_20420 at 4706.514 kb on + strand, within CA264_20420 at 4706.560 kb on - strand, within CA264_20420 at 4706.640 kb on + strand, within CA264_20420 at 4706.678 kb on - strand, within CA264_20420 at 4706.800 kb on - strand at 4706.847 kb on + strand at 4706.847 kb on + strand at 4706.922 kb on - strand, within CA264_20425 at 4706.942 kb on + strand, within CA264_20425 at 4706.942 kb on + strand, within CA264_20425 at 4706.943 kb on - strand, within CA264_20425 at 4706.949 kb on + strand, within CA264_20425 at 4706.949 kb on + strand, within CA264_20425 at 4706.949 kb on + strand, within CA264_20425 at 4706.949 kb on + strand, within CA264_20425 at 4706.949 kb on + strand, within CA264_20425 at 4706.950 kb on - strand, within CA264_20425 at 4706.950 kb on - strand, within CA264_20425 at 4706.950 kb on - strand, within CA264_20425 at 4706.963 kb on + strand, within CA264_20425 at 4706.964 kb on - strand, within CA264_20425 at 4706.999 kb on + strand, within CA264_20425 at 4706.999 kb on + strand, within CA264_20425 at 4706.999 kb on + strand, within CA264_20425 at 4707.000 kb on - strand, within CA264_20425 at 4707.003 kb on + strand, within CA264_20425 at 4707.003 kb on + strand, within CA264_20425 at 4707.004 kb on - strand, within CA264_20425 at 4707.004 kb on - strand, within CA264_20425 at 4707.004 kb on - strand, within CA264_20425 at 4707.005 kb on + strand, within CA264_20425 at 4707.006 kb on - strand, within CA264_20425 at 4707.008 kb on + strand, within CA264_20425 at 4707.008 kb on + strand, within CA264_20425 at 4707.008 kb on + strand, within CA264_20425 at 4707.008 kb on + strand, within CA264_20425 at 4707.009 kb on - strand, within CA264_20425 at 4707.009 kb on - strand, within CA264_20425 at 4707.017 kb on + strand, within CA264_20425 at 4707.047 kb on + strand, within CA264_20425 at 4707.056 kb on - strand, within CA264_20425 at 4707.072 kb on + strand, within CA264_20425 at 4707.072 kb on + strand, within CA264_20425 at 4707.072 kb on + strand, within CA264_20425 at 4707.095 kb on + strand, within CA264_20425 at 4707.123 kb on + strand, within CA264_20425 at 4707.127 kb on + strand, within CA264_20425 at 4707.128 kb on - strand, within CA264_20425 at 4707.128 kb on - strand, within CA264_20425 at 4707.128 kb on - strand, within CA264_20425 at 4707.132 kb on + strand, within CA264_20425 at 4707.133 kb on - strand, within CA264_20425 at 4707.156 kb on + strand, within CA264_20425 at 4707.212 kb on + strand, within CA264_20425 at 4707.242 kb on + strand, within CA264_20425 at 4707.297 kb on - strand, within CA264_20425 at 4707.300 kb on + strand, within CA264_20425 at 4707.300 kb on + strand, within CA264_20425 at 4707.301 kb on - strand, within CA264_20425 at 4707.360 kb on + strand, within CA264_20425 at 4707.367 kb on + strand, within CA264_20425 at 4707.367 kb on + strand, within CA264_20425 at 4707.469 kb on + strand at 4707.470 kb on - strand at 4707.470 kb on - strand at 4707.504 kb on + strand at 4707.504 kb on + strand at 4707.509 kb on + strand at 4707.509 kb on + strand at 4707.510 kb on - strand at 4707.520 kb on + strand at 4707.521 kb on - strand at 4707.596 kb on + strand, within CA264_20430 at 4707.651 kb on - strand, within CA264_20430 at 4707.689 kb on - strand, within CA264_20430 at 4707.691 kb on - strand, within CA264_20430 at 4707.691 kb on - strand, within CA264_20430 at 4707.691 kb on - strand, within CA264_20430 at 4707.693 kb on + strand, within CA264_20430 at 4707.696 kb on - strand, within CA264_20430 at 4707.700 kb on - strand, within CA264_20430 at 4707.725 kb on - strand, within CA264_20430 at 4707.737 kb on + strand, within CA264_20430 at 4707.737 kb on + strand, within CA264_20430 at 4707.761 kb on + strand, within CA264_20430 at 4707.981 kb on - strand, within CA264_20430 at 4708.024 kb on + strand, within CA264_20430 at 4708.024 kb on + strand, within CA264_20430 at 4708.025 kb on - strand, within CA264_20430 at 4708.027 kb on - strand, within CA264_20430 at 4708.027 kb on - strand, within CA264_20430 at 4708.040 kb on + strand, within CA264_20430 at 4708.041 kb on - strand, within CA264_20430 at 4708.047 kb on - strand, within CA264_20430 at 4708.058 kb on + strand, within CA264_20430 at 4708.058 kb on + strand, within CA264_20430 at 4708.058 kb on + strand, within CA264_20430 at 4708.110 kb on + strand, within CA264_20430 at 4708.111 kb on - strand, within CA264_20430 at 4708.132 kb on + strand, within CA264_20430 at 4708.133 kb on - strand, within CA264_20430 at 4708.225 kb on - strand at 4708.257 kb on + strand at 4708.312 kb on + strand at 4708.312 kb on + strand at 4708.313 kb on - strand at 4708.366 kb on - strand at 4708.371 kb on - strand at 4708.395 kb on + strand at 4708.395 kb on + strand at 4708.395 kb on + strand at 4708.396 kb on - strand at 4708.396 kb on - strand at 4708.399 kb on + strand at 4708.399 kb on + strand at 4708.399 kb on + strand at 4708.399 kb on + strand at 4708.399 kb on + strand at 4708.399 kb on + strand at 4708.400 kb on - strand at 4708.400 kb on - strand at 4708.400 kb on - strand at 4708.403 kb on + strand at 4708.403 kb on + strand at 4708.403 kb on + strand at 4708.404 kb on - strand at 4708.419 kb on + strand at 4708.487 kb on - strand at 4708.487 kb on - strand at 4708.487 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 4,705,845 - +1.3 4,705,885 + -0.2 4,705,885 + +1.1 4,705,885 + -1.3 4,705,887 + -0.4 4,705,888 - -0.7 4,705,894 - -0.9 4,705,906 + +0.2 4,705,906 + +0.3 4,705,906 + +1.1 4,705,907 - -0.6 4,705,911 - +1.6 4,705,914 + -2.0 4,705,917 + +0.1 4,705,920 - +2.1 4,705,943 - +1.6 4,705,982 - +2.0 4,706,012 + +2.0 4,706,320 - CA264_20420 0.32 +1.9 4,706,329 + CA264_20420 0.33 +0.6 4,706,330 - CA264_20420 0.33 +0.3 4,706,330 - CA264_20420 0.33 +0.5 4,706,456 + CA264_20420 0.49 +0.0 4,706,514 + CA264_20420 0.57 -2.0 4,706,560 - CA264_20420 0.63 +1.7 4,706,640 + CA264_20420 0.73 +0.2 4,706,678 - CA264_20420 0.78 +2.2 4,706,800 - +1.7 4,706,847 + +0.5 4,706,847 + +0.8 4,706,922 - CA264_20425 0.12 +1.1 4,706,942 + CA264_20425 0.15 +1.1 4,706,942 + CA264_20425 0.15 +0.6 4,706,943 - CA264_20425 0.15 +1.9 4,706,949 + CA264_20425 0.16 -0.5 4,706,949 + CA264_20425 0.16 +2.0 4,706,949 + CA264_20425 0.16 +0.5 4,706,949 + CA264_20425 0.16 +0.5 4,706,949 + CA264_20425 0.16 +0.9 4,706,950 - CA264_20425 0.16 +1.4 4,706,950 - CA264_20425 0.16 +1.4 4,706,950 - CA264_20425 0.16 +2.0 4,706,963 + CA264_20425 0.18 +0.8 4,706,964 - CA264_20425 0.19 +1.7 4,706,999 + CA264_20425 0.24 +1.1 4,706,999 + CA264_20425 0.24 +0.7 4,706,999 + CA264_20425 0.24 +0.8 4,707,000 - CA264_20425 0.24 +1.5 4,707,003 + CA264_20425 0.25 +0.7 4,707,003 + CA264_20425 0.25 +1.2 4,707,004 - CA264_20425 0.25 +1.2 4,707,004 - CA264_20425 0.25 +1.1 4,707,004 - CA264_20425 0.25 +0.4 4,707,005 + CA264_20425 0.25 +0.2 4,707,006 - CA264_20425 0.25 +2.1 4,707,008 + CA264_20425 0.25 +0.5 4,707,008 + CA264_20425 0.25 +0.9 4,707,008 + CA264_20425 0.25 +0.9 4,707,008 + CA264_20425 0.25 -0.6 4,707,009 - CA264_20425 0.26 +2.1 4,707,009 - CA264_20425 0.26 +1.7 4,707,017 + CA264_20425 0.27 +0.9 4,707,047 + CA264_20425 0.31 +0.6 4,707,056 - CA264_20425 0.33 +2.1 4,707,072 + CA264_20425 0.35 +0.9 4,707,072 + CA264_20425 0.35 -0.1 4,707,072 + CA264_20425 0.35 +1.2 4,707,095 + CA264_20425 0.39 +0.3 4,707,123 + CA264_20425 0.43 +0.9 4,707,127 + CA264_20425 0.44 +0.7 4,707,128 - CA264_20425 0.44 +1.3 4,707,128 - CA264_20425 0.44 +1.2 4,707,128 - CA264_20425 0.44 +1.3 4,707,132 + CA264_20425 0.45 +0.9 4,707,133 - CA264_20425 0.45 +1.5 4,707,156 + CA264_20425 0.48 +1.7 4,707,212 + CA264_20425 0.57 +0.2 4,707,242 + CA264_20425 0.62 +0.8 4,707,297 - CA264_20425 0.70 +0.5 4,707,300 + CA264_20425 0.71 +1.2 4,707,300 + CA264_20425 0.71 +0.7 4,707,301 - CA264_20425 0.71 +1.7 4,707,360 + CA264_20425 0.80 +1.6 4,707,367 + CA264_20425 0.81 +0.8 4,707,367 + CA264_20425 0.81 +0.4 4,707,469 + +0.2 4,707,470 - +1.0 4,707,470 - +1.4 4,707,504 + +0.5 4,707,504 + +0.7 4,707,509 + +1.8 4,707,509 + +1.4 4,707,510 - +1.8 4,707,520 + +0.9 4,707,521 - +1.5 4,707,596 + CA264_20430 0.14 +1.0 4,707,651 - CA264_20430 0.21 +1.2 4,707,689 - CA264_20430 0.26 +0.7 4,707,691 - CA264_20430 0.27 +1.5 4,707,691 - CA264_20430 0.27 +2.4 4,707,691 - CA264_20430 0.27 +1.5 4,707,693 + CA264_20430 0.27 -0.0 4,707,696 - CA264_20430 0.27 +1.3 4,707,700 - CA264_20430 0.28 +2.0 4,707,725 - CA264_20430 0.31 +1.4 4,707,737 + CA264_20430 0.33 -0.2 4,707,737 + CA264_20430 0.33 +1.1 4,707,761 + CA264_20430 0.36 +1.1 4,707,981 - CA264_20430 0.65 +1.6 4,708,024 + CA264_20430 0.71 +0.4 4,708,024 + CA264_20430 0.71 +0.8 4,708,025 - CA264_20430 0.71 +1.7 4,708,027 - CA264_20430 0.71 +3.0 4,708,027 - CA264_20430 0.71 +1.9 4,708,040 + CA264_20430 0.73 +0.6 4,708,041 - CA264_20430 0.73 +1.8 4,708,047 - CA264_20430 0.74 +1.8 4,708,058 + CA264_20430 0.75 +1.3 4,708,058 + CA264_20430 0.75 +0.7 4,708,058 + CA264_20430 0.75 +1.9 4,708,110 + CA264_20430 0.82 -1.3 4,708,111 - CA264_20430 0.82 +1.3 4,708,132 + CA264_20430 0.85 +0.0 4,708,133 - CA264_20430 0.85 +1.4 4,708,225 - +0.9 4,708,257 + +1.3 4,708,312 + -0.2 4,708,312 + +0.5 4,708,313 - +1.8 4,708,366 - +1.5 4,708,371 - +0.0 4,708,395 + +0.3 4,708,395 + +0.6 4,708,395 + +0.2 4,708,396 - +1.3 4,708,396 - +0.9 4,708,399 + -0.2 4,708,399 + +1.2 4,708,399 + +0.1 4,708,399 + +0.3 4,708,399 + +1.2 4,708,399 + +0.7 4,708,400 - +1.0 4,708,400 - +3.2 4,708,400 - +1.4 4,708,403 + +2.8 4,708,403 + +1.0 4,708,403 + +1.8 4,708,404 - +0.9 4,708,419 + +1.6 4,708,487 - +1.6 4,708,487 - +1.1 4,708,487 - +1.1
Or see this region's nucleotide sequence