Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_20140 and CA264_20145 are separated by 19 nucleotides CA264_20145 and CA264_20150 are separated by 272 nucleotides
CA264_20140: CA264_20140 - acriflavin resistance protein, at 4,643,179 to 4,646,277
_20140
CA264_20145: CA264_20145 - hypothetical protein, at 4,646,297 to 4,647,709
_20145
CA264_20150: CA264_20150 - hypothetical protein, at 4,647,982 to 4,648,863
_20150
Position (kb)
4646
4647
4648 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4645.301 kb on - strand, within CA264_20140 at 4645.325 kb on - strand, within CA264_20140 at 4645.325 kb on - strand, within CA264_20140 at 4645.325 kb on - strand, within CA264_20140 at 4645.332 kb on - strand, within CA264_20140 at 4645.332 kb on - strand, within CA264_20140 at 4645.332 kb on - strand, within CA264_20140 at 4645.379 kb on - strand, within CA264_20140 at 4645.379 kb on - strand, within CA264_20140 at 4645.463 kb on + strand, within CA264_20140 at 4645.463 kb on + strand, within CA264_20140 at 4645.463 kb on + strand, within CA264_20140 at 4645.616 kb on + strand, within CA264_20140 at 4645.617 kb on - strand, within CA264_20140 at 4645.670 kb on + strand, within CA264_20140 at 4645.683 kb on - strand, within CA264_20140 at 4645.683 kb on - strand, within CA264_20140 at 4645.689 kb on + strand, within CA264_20140 at 4645.732 kb on + strand, within CA264_20140 at 4645.761 kb on + strand, within CA264_20140 at 4645.794 kb on + strand, within CA264_20140 at 4645.987 kb on - strand at 4645.994 kb on + strand at 4645.994 kb on + strand at 4645.995 kb on - strand at 4645.999 kb on + strand at 4646.000 kb on - strand at 4646.276 kb on - strand at 4646.335 kb on + strand at 4646.335 kb on + strand at 4646.336 kb on - strand at 4646.382 kb on + strand at 4646.523 kb on + strand, within CA264_20145 at 4646.547 kb on - strand, within CA264_20145 at 4646.558 kb on + strand, within CA264_20145 at 4646.558 kb on + strand, within CA264_20145 at 4646.579 kb on + strand, within CA264_20145 at 4646.579 kb on + strand, within CA264_20145 at 4646.580 kb on - strand, within CA264_20145 at 4646.630 kb on + strand, within CA264_20145 at 4646.641 kb on + strand, within CA264_20145 at 4646.641 kb on + strand, within CA264_20145 at 4646.642 kb on - strand, within CA264_20145 at 4646.642 kb on - strand, within CA264_20145 at 4646.717 kb on - strand, within CA264_20145 at 4646.757 kb on + strand, within CA264_20145 at 4646.846 kb on + strand, within CA264_20145 at 4646.917 kb on - strand, within CA264_20145 at 4646.919 kb on - strand, within CA264_20145 at 4646.926 kb on - strand, within CA264_20145 at 4646.971 kb on - strand, within CA264_20145 at 4647.018 kb on + strand, within CA264_20145 at 4647.019 kb on - strand, within CA264_20145 at 4647.038 kb on + strand, within CA264_20145 at 4647.040 kb on + strand, within CA264_20145 at 4647.040 kb on + strand, within CA264_20145 at 4647.040 kb on + strand, within CA264_20145 at 4647.040 kb on + strand, within CA264_20145 at 4647.040 kb on + strand, within CA264_20145 at 4647.040 kb on + strand, within CA264_20145 at 4647.040 kb on + strand, within CA264_20145 at 4647.041 kb on - strand, within CA264_20145 at 4647.041 kb on - strand, within CA264_20145 at 4647.041 kb on - strand, within CA264_20145 at 4647.041 kb on - strand, within CA264_20145 at 4647.041 kb on - strand, within CA264_20145 at 4647.044 kb on + strand, within CA264_20145 at 4647.044 kb on + strand, within CA264_20145 at 4647.167 kb on + strand, within CA264_20145 at 4647.167 kb on + strand, within CA264_20145 at 4647.190 kb on + strand, within CA264_20145 at 4647.191 kb on - strand, within CA264_20145 at 4647.191 kb on - strand, within CA264_20145 at 4647.236 kb on + strand, within CA264_20145 at 4647.269 kb on - strand, within CA264_20145 at 4647.280 kb on + strand, within CA264_20145 at 4647.280 kb on + strand, within CA264_20145 at 4647.280 kb on + strand, within CA264_20145 at 4647.280 kb on + strand, within CA264_20145 at 4647.282 kb on + strand, within CA264_20145 at 4647.283 kb on - strand, within CA264_20145 at 4647.304 kb on + strand, within CA264_20145 at 4647.309 kb on - strand, within CA264_20145 at 4647.432 kb on + strand, within CA264_20145 at 4647.455 kb on + strand, within CA264_20145 at 4647.707 kb on + strand at 4647.707 kb on + strand at 4647.707 kb on + strand at 4647.707 kb on + strand at 4647.707 kb on + strand at 4647.721 kb on + strand at 4647.721 kb on + strand at 4647.721 kb on + strand at 4647.722 kb on - strand at 4647.739 kb on - strand at 4647.767 kb on - strand at 4647.835 kb on + strand at 4647.840 kb on - strand at 4647.845 kb on - strand at 4647.845 kb on - strand at 4647.845 kb on - strand at 4647.848 kb on + strand at 4647.849 kb on - strand at 4647.849 kb on - strand at 4647.849 kb on - strand at 4647.854 kb on + strand at 4647.854 kb on + strand at 4647.866 kb on - strand at 4647.890 kb on - strand at 4647.890 kb on - strand at 4647.890 kb on - strand at 4647.890 kb on - strand at 4647.911 kb on + strand at 4647.960 kb on + strand at 4647.977 kb on + strand at 4647.997 kb on + strand at 4648.032 kb on + strand at 4648.037 kb on + strand at 4648.037 kb on + strand at 4648.037 kb on + strand at 4648.058 kb on + strand at 4648.062 kb on + strand at 4648.062 kb on + strand at 4648.062 kb on + strand at 4648.063 kb on - strand at 4648.063 kb on - strand at 4648.145 kb on + strand, within CA264_20150 at 4648.148 kb on + strand, within CA264_20150 at 4648.149 kb on - strand, within CA264_20150 at 4648.150 kb on + strand, within CA264_20150 at 4648.150 kb on + strand, within CA264_20150 at 4648.150 kb on + strand, within CA264_20150 at 4648.150 kb on + strand, within CA264_20150 at 4648.151 kb on - strand, within CA264_20150 at 4648.151 kb on - strand, within CA264_20150 at 4648.151 kb on - strand, within CA264_20150 at 4648.178 kb on - strand, within CA264_20150 at 4648.201 kb on + strand, within CA264_20150 at 4648.202 kb on - strand, within CA264_20150 at 4648.209 kb on - strand, within CA264_20150 at 4648.209 kb on - strand, within CA264_20150 at 4648.209 kb on - strand, within CA264_20150 at 4648.210 kb on + strand, within CA264_20150 at 4648.210 kb on + strand, within CA264_20150 at 4648.210 kb on + strand, within CA264_20150 at 4648.210 kb on + strand, within CA264_20150 at 4648.211 kb on - strand, within CA264_20150 at 4648.211 kb on - strand, within CA264_20150 at 4648.211 kb on - strand, within CA264_20150 at 4648.214 kb on + strand, within CA264_20150 at 4648.214 kb on + strand, within CA264_20150 at 4648.214 kb on + strand, within CA264_20150 at 4648.214 kb on + strand, within CA264_20150 at 4648.214 kb on + strand, within CA264_20150 at 4648.214 kb on + strand, within CA264_20150 at 4648.214 kb on + strand, within CA264_20150 at 4648.215 kb on - strand, within CA264_20150 at 4648.241 kb on - strand, within CA264_20150 at 4648.262 kb on + strand, within CA264_20150 at 4648.262 kb on + strand, within CA264_20150 at 4648.263 kb on - strand, within CA264_20150 at 4648.263 kb on - strand, within CA264_20150 at 4648.265 kb on + strand, within CA264_20150 at 4648.265 kb on + strand, within CA264_20150 at 4648.319 kb on + strand, within CA264_20150 at 4648.352 kb on - strand, within CA264_20150 at 4648.361 kb on - strand, within CA264_20150 at 4648.387 kb on - strand, within CA264_20150 at 4648.387 kb on - strand, within CA264_20150 at 4648.506 kb on + strand, within CA264_20150 at 4648.575 kb on + strand, within CA264_20150 at 4648.585 kb on + strand, within CA264_20150 at 4648.605 kb on + strand, within CA264_20150 at 4648.628 kb on - strand, within CA264_20150 at 4648.662 kb on + strand, within CA264_20150 at 4648.671 kb on + strand, within CA264_20150
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 4,645,301 - CA264_20140 0.68 -0.2 4,645,325 - CA264_20140 0.69 -0.2 4,645,325 - CA264_20140 0.69 +0.4 4,645,325 - CA264_20140 0.69 +0.1 4,645,332 - CA264_20140 0.69 +0.4 4,645,332 - CA264_20140 0.69 -0.2 4,645,332 - CA264_20140 0.69 +0.1 4,645,379 - CA264_20140 0.71 -0.6 4,645,379 - CA264_20140 0.71 +0.3 4,645,463 + CA264_20140 0.74 -0.7 4,645,463 + CA264_20140 0.74 -0.5 4,645,463 + CA264_20140 0.74 +0.8 4,645,616 + CA264_20140 0.79 -0.2 4,645,617 - CA264_20140 0.79 +0.0 4,645,670 + CA264_20140 0.80 +0.8 4,645,683 - CA264_20140 0.81 -0.9 4,645,683 - CA264_20140 0.81 -1.5 4,645,689 + CA264_20140 0.81 -1.1 4,645,732 + CA264_20140 0.82 -1.6 4,645,761 + CA264_20140 0.83 +0.1 4,645,794 + CA264_20140 0.84 +0.8 4,645,987 - +0.6 4,645,994 + +0.9 4,645,994 + +0.0 4,645,995 - -0.2 4,645,999 + +0.3 4,646,000 - -0.8 4,646,276 - -0.7 4,646,335 + +1.5 4,646,335 + +0.0 4,646,336 - -0.9 4,646,382 + +0.3 4,646,523 + CA264_20145 0.16 -0.7 4,646,547 - CA264_20145 0.18 +0.2 4,646,558 + CA264_20145 0.18 -0.6 4,646,558 + CA264_20145 0.18 -0.3 4,646,579 + CA264_20145 0.20 -0.5 4,646,579 + CA264_20145 0.20 -0.3 4,646,580 - CA264_20145 0.20 -0.7 4,646,630 + CA264_20145 0.24 -1.1 4,646,641 + CA264_20145 0.24 -0.1 4,646,641 + CA264_20145 0.24 -0.1 4,646,642 - CA264_20145 0.24 +1.2 4,646,642 - CA264_20145 0.24 +0.3 4,646,717 - CA264_20145 0.30 -0.3 4,646,757 + CA264_20145 0.33 +1.0 4,646,846 + CA264_20145 0.39 -0.2 4,646,917 - CA264_20145 0.44 +1.0 4,646,919 - CA264_20145 0.44 -0.4 4,646,926 - CA264_20145 0.45 +0.9 4,646,971 - CA264_20145 0.48 +1.2 4,647,018 + CA264_20145 0.51 -1.0 4,647,019 - CA264_20145 0.51 -0.3 4,647,038 + CA264_20145 0.52 -0.5 4,647,040 + CA264_20145 0.53 -0.3 4,647,040 + CA264_20145 0.53 +1.8 4,647,040 + CA264_20145 0.53 -0.4 4,647,040 + CA264_20145 0.53 +0.4 4,647,040 + CA264_20145 0.53 -0.3 4,647,040 + CA264_20145 0.53 -0.8 4,647,040 + CA264_20145 0.53 -0.2 4,647,041 - CA264_20145 0.53 -0.3 4,647,041 - CA264_20145 0.53 +0.6 4,647,041 - CA264_20145 0.53 +1.9 4,647,041 - CA264_20145 0.53 +0.3 4,647,041 - CA264_20145 0.53 -0.1 4,647,044 + CA264_20145 0.53 -0.5 4,647,044 + CA264_20145 0.53 +1.8 4,647,167 + CA264_20145 0.62 +0.4 4,647,167 + CA264_20145 0.62 -0.5 4,647,190 + CA264_20145 0.63 +0.3 4,647,191 - CA264_20145 0.63 +0.2 4,647,191 - CA264_20145 0.63 -0.9 4,647,236 + CA264_20145 0.66 +0.7 4,647,269 - CA264_20145 0.69 +1.1 4,647,280 + CA264_20145 0.70 +0.6 4,647,280 + CA264_20145 0.70 -0.6 4,647,280 + CA264_20145 0.70 +1.2 4,647,280 + CA264_20145 0.70 -0.8 4,647,282 + CA264_20145 0.70 -0.7 4,647,283 - CA264_20145 0.70 -0.3 4,647,304 + CA264_20145 0.71 -0.5 4,647,309 - CA264_20145 0.72 -0.7 4,647,432 + CA264_20145 0.80 -0.4 4,647,455 + CA264_20145 0.82 -0.1 4,647,707 + +0.2 4,647,707 + -0.7 4,647,707 + -0.7 4,647,707 + +0.0 4,647,707 + -0.4 4,647,721 + -0.8 4,647,721 + +1.8 4,647,721 + +0.5 4,647,722 - -0.3 4,647,739 - -0.9 4,647,767 - -1.0 4,647,835 + +2.1 4,647,840 - -0.9 4,647,845 - +0.2 4,647,845 - -0.3 4,647,845 - -0.1 4,647,848 + -0.1 4,647,849 - -0.2 4,647,849 - +1.8 4,647,849 - +0.8 4,647,854 + -0.2 4,647,854 + +0.5 4,647,866 - -0.5 4,647,890 - -0.2 4,647,890 - -0.3 4,647,890 - -1.0 4,647,890 - -0.4 4,647,911 + +0.5 4,647,960 + +0.8 4,647,977 + +0.3 4,647,997 + +1.2 4,648,032 + +0.3 4,648,037 + +0.0 4,648,037 + -0.2 4,648,037 + -0.5 4,648,058 + +1.0 4,648,062 + +0.1 4,648,062 + +0.7 4,648,062 + +0.8 4,648,063 - +0.7 4,648,063 - -0.0 4,648,145 + CA264_20150 0.18 +0.2 4,648,148 + CA264_20150 0.19 -1.7 4,648,149 - CA264_20150 0.19 +0.3 4,648,150 + CA264_20150 0.19 +1.1 4,648,150 + CA264_20150 0.19 +0.8 4,648,150 + CA264_20150 0.19 -0.1 4,648,150 + CA264_20150 0.19 -0.0 4,648,151 - CA264_20150 0.19 +0.8 4,648,151 - CA264_20150 0.19 +0.4 4,648,151 - CA264_20150 0.19 -0.5 4,648,178 - CA264_20150 0.22 -0.1 4,648,201 + CA264_20150 0.25 -0.6 4,648,202 - CA264_20150 0.25 -0.0 4,648,209 - CA264_20150 0.26 -0.7 4,648,209 - CA264_20150 0.26 -0.8 4,648,209 - CA264_20150 0.26 -0.1 4,648,210 + CA264_20150 0.26 -0.5 4,648,210 + CA264_20150 0.26 +1.7 4,648,210 + CA264_20150 0.26 +0.2 4,648,210 + CA264_20150 0.26 -1.1 4,648,211 - CA264_20150 0.26 -0.3 4,648,211 - CA264_20150 0.26 -0.5 4,648,211 - CA264_20150 0.26 +0.3 4,648,214 + CA264_20150 0.26 -0.3 4,648,214 + CA264_20150 0.26 -1.0 4,648,214 + CA264_20150 0.26 +0.3 4,648,214 + CA264_20150 0.26 +0.0 4,648,214 + CA264_20150 0.26 +1.6 4,648,214 + CA264_20150 0.26 -0.4 4,648,214 + CA264_20150 0.26 +0.4 4,648,215 - CA264_20150 0.26 -0.1 4,648,241 - CA264_20150 0.29 -0.6 4,648,262 + CA264_20150 0.32 -0.8 4,648,262 + CA264_20150 0.32 -0.6 4,648,263 - CA264_20150 0.32 +0.2 4,648,263 - CA264_20150 0.32 -0.5 4,648,265 + CA264_20150 0.32 -1.8 4,648,265 + CA264_20150 0.32 -0.3 4,648,319 + CA264_20150 0.38 +0.0 4,648,352 - CA264_20150 0.42 +0.3 4,648,361 - CA264_20150 0.43 -1.1 4,648,387 - CA264_20150 0.46 -0.4 4,648,387 - CA264_20150 0.46 -0.6 4,648,506 + CA264_20150 0.59 -1.8 4,648,575 + CA264_20150 0.67 -1.4 4,648,585 + CA264_20150 0.68 -0.1 4,648,605 + CA264_20150 0.71 +1.0 4,648,628 - CA264_20150 0.73 +0.1 4,648,662 + CA264_20150 0.77 -1.3 4,648,671 + CA264_20150 0.78 -1.1
Or see this region's nucleotide sequence