Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_17420

Experiment: m.b. Thallium(I) acetate 0.001 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_17410 and CA264_17415 are separated by 390 nucleotidesCA264_17415 and CA264_17420 are separated by 126 nucleotidesCA264_17420 and CA264_17425 are separated by 94 nucleotidesCA264_17425 and CA264_17430 are separated by 336 nucleotides CA264_17410: CA264_17410 - hypothetical protein, at 4,060,062 to 4,061,294 _17410 CA264_17415: CA264_17415 - hypothetical protein, at 4,061,685 to 4,061,885 _17415 CA264_17420: CA264_17420 - hypothetical protein, at 4,062,012 to 4,062,260 _17420 CA264_17425: CA264_17425 - hypothetical protein, at 4,062,355 to 4,062,786 _17425 CA264_17430: CA264_17430 - DUF2807 domain-containing protein, at 4,063,123 to 4,063,848 _17430 Position (kb) 4062 4063Strain fitness (log2 ratio) -2 -1 0 1 2at 4061.013 kb on + strand, within CA264_17410at 4061.014 kb on - strand, within CA264_17410at 4061.014 kb on - strand, within CA264_17410at 4061.016 kb on - strand, within CA264_17410at 4061.142 kb on + strand, within CA264_17410at 4061.358 kb on + strandat 4061.359 kb on - strandat 4061.401 kb on - strandat 4061.434 kb on + strandat 4061.436 kb on + strandat 4061.436 kb on + strandat 4061.437 kb on - strandat 4061.440 kb on - strandat 4061.453 kb on - strandat 4061.527 kb on - strandat 4061.541 kb on + strandat 4061.542 kb on - strandat 4061.542 kb on - strandat 4061.622 kb on + strandat 4061.690 kb on + strandat 4061.711 kb on + strand, within CA264_17415at 4061.740 kb on + strand, within CA264_17415at 4061.805 kb on + strand, within CA264_17415at 4061.816 kb on - strand, within CA264_17415at 4061.852 kb on + strand, within CA264_17415at 4061.852 kb on + strand, within CA264_17415at 4061.853 kb on - strand, within CA264_17415at 4061.892 kb on - strandat 4061.962 kb on + strandat 4061.962 kb on + strandat 4061.994 kb on + strandat 4062.130 kb on + strand, within CA264_17420at 4062.131 kb on - strand, within CA264_17420at 4062.167 kb on + strand, within CA264_17420at 4062.175 kb on + strand, within CA264_17420at 4062.193 kb on - strand, within CA264_17420at 4062.193 kb on - strand, within CA264_17420at 4062.193 kb on - strand, within CA264_17420at 4062.225 kb on - strand, within CA264_17420at 4062.246 kb on - strandat 4062.261 kb on + strandat 4062.261 kb on + strandat 4062.261 kb on + strandat 4062.262 kb on - strandat 4062.262 kb on - strandat 4062.280 kb on + strandat 4062.281 kb on - strandat 4062.309 kb on - strandat 4062.335 kb on - strandat 4062.349 kb on + strandat 4062.366 kb on + strandat 4062.412 kb on + strand, within CA264_17425at 4062.448 kb on - strand, within CA264_17425at 4062.448 kb on - strand, within CA264_17425at 4062.452 kb on + strand, within CA264_17425at 4062.452 kb on + strand, within CA264_17425at 4062.453 kb on - strand, within CA264_17425at 4062.453 kb on - strand, within CA264_17425at 4062.502 kb on + strand, within CA264_17425at 4062.503 kb on - strand, within CA264_17425at 4062.503 kb on - strand, within CA264_17425at 4062.503 kb on - strand, within CA264_17425at 4062.553 kb on - strand, within CA264_17425at 4062.586 kb on + strand, within CA264_17425at 4062.607 kb on - strand, within CA264_17425at 4062.624 kb on + strand, within CA264_17425at 4062.624 kb on + strand, within CA264_17425at 4062.691 kb on + strand, within CA264_17425at 4062.692 kb on - strand, within CA264_17425at 4062.693 kb on + strand, within CA264_17425at 4062.713 kb on + strand, within CA264_17425at 4062.713 kb on + strand, within CA264_17425at 4062.768 kb on - strandat 4062.815 kb on + strandat 4062.815 kb on + strandat 4062.816 kb on - strandat 4062.816 kb on - strandat 4062.827 kb on + strandat 4062.827 kb on + strandat 4062.828 kb on - strandat 4062.848 kb on + strandat 4062.864 kb on + strandat 4062.868 kb on + strandat 4062.873 kb on - strandat 4062.916 kb on - strandat 4062.933 kb on + strandat 4062.943 kb on + strandat 4062.943 kb on + strandat 4062.943 kb on + strandat 4062.944 kb on - strandat 4062.944 kb on - strandat 4062.944 kb on - strandat 4062.945 kb on + strandat 4063.046 kb on - strandat 4063.046 kb on - strandat 4063.053 kb on + strandat 4063.053 kb on + strandat 4063.054 kb on - strandat 4063.054 kb on - strandat 4063.059 kb on + strandat 4063.060 kb on - strandat 4063.060 kb on - strandat 4063.110 kb on + strandat 4063.111 kb on - strandat 4063.118 kb on + strandat 4063.118 kb on + strandat 4063.118 kb on + strandat 4063.119 kb on - strandat 4063.119 kb on - strandat 4063.122 kb on + strandat 4063.122 kb on + strandat 4063.123 kb on - strandat 4063.131 kb on + strandat 4063.149 kb on + strandat 4063.149 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml
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4,061,013 + CA264_17410 0.77 -0.9
4,061,014 - CA264_17410 0.77 -0.0
4,061,014 - CA264_17410 0.77 -0.0
4,061,016 - CA264_17410 0.77 +0.6
4,061,142 + CA264_17410 0.88 -0.5
4,061,358 + +0.7
4,061,359 - +0.2
4,061,401 - -0.0
4,061,434 + +0.2
4,061,436 + -0.3
4,061,436 + -0.1
4,061,437 - -0.3
4,061,440 - -0.8
4,061,453 - -0.3
4,061,527 - -0.7
4,061,541 + +0.2
4,061,542 - +0.4
4,061,542 - -0.4
4,061,622 + +0.1
4,061,690 + +0.8
4,061,711 + CA264_17415 0.13 -0.6
4,061,740 + CA264_17415 0.27 +0.9
4,061,805 + CA264_17415 0.60 +1.4
4,061,816 - CA264_17415 0.65 -0.7
4,061,852 + CA264_17415 0.83 -1.4
4,061,852 + CA264_17415 0.83 -0.7
4,061,853 - CA264_17415 0.84 +0.6
4,061,892 - -0.3
4,061,962 + +0.2
4,061,962 + -0.6
4,061,994 + +0.5
4,062,130 + CA264_17420 0.47 -0.8
4,062,131 - CA264_17420 0.48 -0.3
4,062,167 + CA264_17420 0.62 -2.7
4,062,175 + CA264_17420 0.65 -0.3
4,062,193 - CA264_17420 0.73 +1.0
4,062,193 - CA264_17420 0.73 -1.1
4,062,193 - CA264_17420 0.73 -0.2
4,062,225 - CA264_17420 0.86 -1.4
4,062,246 - -0.2
4,062,261 + +0.6
4,062,261 + -0.3
4,062,261 + +0.3
4,062,262 - +0.6
4,062,262 - -0.2
4,062,280 + -0.9
4,062,281 - -0.0
4,062,309 - -0.1
4,062,335 - -0.1
4,062,349 + -0.4
4,062,366 + -0.5
4,062,412 + CA264_17425 0.13 -0.2
4,062,448 - CA264_17425 0.22 -0.5
4,062,448 - CA264_17425 0.22 +0.6
4,062,452 + CA264_17425 0.22 -1.7
4,062,452 + CA264_17425 0.22 +2.2
4,062,453 - CA264_17425 0.23 -0.7
4,062,453 - CA264_17425 0.23 +0.8
4,062,502 + CA264_17425 0.34 -1.0
4,062,503 - CA264_17425 0.34 +0.3
4,062,503 - CA264_17425 0.34 -0.0
4,062,503 - CA264_17425 0.34 +0.3
4,062,553 - CA264_17425 0.46 -0.0
4,062,586 + CA264_17425 0.53 +1.0
4,062,607 - CA264_17425 0.58 -0.3
4,062,624 + CA264_17425 0.62 -1.1
4,062,624 + CA264_17425 0.62 -0.5
4,062,691 + CA264_17425 0.78 -0.3
4,062,692 - CA264_17425 0.78 +1.8
4,062,693 + CA264_17425 0.78 -0.7
4,062,713 + CA264_17425 0.83 -0.2
4,062,713 + CA264_17425 0.83 -0.7
4,062,768 - -0.3
4,062,815 + -0.1
4,062,815 + -0.4
4,062,816 - +0.1
4,062,816 - -1.4
4,062,827 + -0.6
4,062,827 + +0.5
4,062,828 - +0.1
4,062,848 + -0.7
4,062,864 + +0.4
4,062,868 + -0.8
4,062,873 - -1.0
4,062,916 - +0.2
4,062,933 + +0.3
4,062,943 + -0.2
4,062,943 + -1.0
4,062,943 + -1.1
4,062,944 - -1.6
4,062,944 - +0.9
4,062,944 - +1.9
4,062,945 + +0.8
4,063,046 - -0.7
4,063,046 - +0.1
4,063,053 + -0.2
4,063,053 + +0.5
4,063,054 - -0.4
4,063,054 - +1.1
4,063,059 + -0.3
4,063,060 - -1.8
4,063,060 - +0.9
4,063,110 + +0.7
4,063,111 - +0.0
4,063,118 + -0.5
4,063,118 + -0.6
4,063,118 + +0.2
4,063,119 - -0.4
4,063,119 - -0.3
4,063,122 + -0.1
4,063,122 + -1.2
4,063,123 - +0.4
4,063,131 + -2.3
4,063,149 + -2.3
4,063,149 + -0.6

Or see this region's nucleotide sequence