Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_16645 and CA264_16650 are separated by 65 nucleotides CA264_16650 and CA264_16655 are separated by 48 nucleotides CA264_16655 and CA264_16660 are separated by 244 nucleotides
CA264_16645: CA264_16645 - peptidase C69, at 3,869,617 to 3,870,933
_16645
CA264_16650: CA264_16650 - four helix bundle protein, at 3,870,999 to 3,871,361
_16650
CA264_16655: CA264_16655 - TldD protein, at 3,871,410 to 3,873,056
_16655
CA264_16660: CA264_16660 - septal ring lytic transglycosylase RlpA family lipoprotein, at 3,873,301 to 3,873,795
_16660
Position (kb)
3871
3872
3873
3874 Strain fitness (log2 ratio)
-1
0
1
2
3 at 3870.421 kb on + strand, within CA264_16645 at 3870.421 kb on + strand, within CA264_16645 at 3870.483 kb on + strand, within CA264_16645 at 3870.484 kb on - strand, within CA264_16645 at 3870.486 kb on - strand, within CA264_16645 at 3870.614 kb on + strand, within CA264_16645 at 3870.691 kb on - strand, within CA264_16645 at 3870.708 kb on + strand, within CA264_16645 at 3870.764 kb on - strand, within CA264_16645 at 3870.802 kb on + strand at 3870.803 kb on - strand at 3870.836 kb on - strand at 3870.894 kb on + strand at 3870.895 kb on - strand at 3870.922 kb on + strand at 3870.922 kb on + strand at 3870.922 kb on + strand at 3870.923 kb on - strand at 3870.926 kb on - strand at 3870.967 kb on + strand at 3870.973 kb on - strand at 3871.028 kb on + strand at 3871.035 kb on + strand at 3871.078 kb on - strand, within CA264_16650 at 3871.078 kb on - strand, within CA264_16650 at 3871.078 kb on - strand, within CA264_16650 at 3871.100 kb on + strand, within CA264_16650 at 3871.101 kb on - strand, within CA264_16650 at 3871.103 kb on + strand, within CA264_16650 at 3871.104 kb on - strand, within CA264_16650 at 3871.105 kb on + strand, within CA264_16650 at 3871.135 kb on + strand, within CA264_16650 at 3871.135 kb on + strand, within CA264_16650 at 3871.166 kb on + strand, within CA264_16650 at 3871.166 kb on + strand, within CA264_16650 at 3871.167 kb on - strand, within CA264_16650 at 3871.170 kb on + strand, within CA264_16650 at 3871.233 kb on - strand, within CA264_16650 at 3871.233 kb on - strand, within CA264_16650 at 3871.233 kb on - strand, within CA264_16650 at 3871.248 kb on + strand, within CA264_16650 at 3871.248 kb on + strand, within CA264_16650 at 3871.267 kb on - strand, within CA264_16650 at 3871.269 kb on - strand, within CA264_16650 at 3871.290 kb on + strand, within CA264_16650 at 3871.298 kb on + strand, within CA264_16650 at 3871.298 kb on + strand, within CA264_16650 at 3871.300 kb on + strand, within CA264_16650 at 3871.301 kb on - strand, within CA264_16650 at 3871.301 kb on - strand, within CA264_16650 at 3871.301 kb on - strand, within CA264_16650 at 3871.329 kb on - strand at 3871.331 kb on - strand at 3871.361 kb on + strand at 3871.364 kb on + strand at 3871.364 kb on + strand at 3871.364 kb on + strand at 3871.364 kb on + strand at 3871.365 kb on - strand at 3871.367 kb on - strand at 3871.367 kb on - strand at 3871.494 kb on - strand at 3871.535 kb on - strand at 3871.595 kb on - strand, within CA264_16655 at 3871.688 kb on + strand, within CA264_16655 at 3871.693 kb on + strand, within CA264_16655 at 3871.694 kb on - strand, within CA264_16655 at 3871.715 kb on - strand, within CA264_16655 at 3871.715 kb on - strand, within CA264_16655 at 3871.715 kb on - strand, within CA264_16655 at 3871.725 kb on - strand, within CA264_16655 at 3871.725 kb on - strand, within CA264_16655 at 3871.888 kb on + strand, within CA264_16655 at 3871.889 kb on - strand, within CA264_16655 at 3872.001 kb on + strand, within CA264_16655 at 3872.017 kb on + strand, within CA264_16655 at 3872.021 kb on + strand, within CA264_16655 at 3872.022 kb on - strand, within CA264_16655 at 3872.043 kb on - strand, within CA264_16655 at 3872.071 kb on + strand, within CA264_16655 at 3872.072 kb on - strand, within CA264_16655 at 3872.135 kb on + strand, within CA264_16655 at 3872.171 kb on - strand, within CA264_16655 at 3872.251 kb on + strand, within CA264_16655 at 3872.252 kb on - strand, within CA264_16655 at 3872.296 kb on - strand, within CA264_16655 at 3872.321 kb on + strand, within CA264_16655 at 3872.321 kb on + strand, within CA264_16655 at 3872.323 kb on + strand, within CA264_16655 at 3872.324 kb on - strand, within CA264_16655 at 3872.443 kb on + strand, within CA264_16655 at 3872.444 kb on - strand, within CA264_16655 at 3872.502 kb on - strand, within CA264_16655 at 3872.613 kb on - strand, within CA264_16655 at 3872.613 kb on - strand, within CA264_16655 at 3872.623 kb on + strand, within CA264_16655 at 3872.624 kb on - strand, within CA264_16655 at 3872.662 kb on - strand, within CA264_16655 at 3872.672 kb on + strand, within CA264_16655 at 3872.713 kb on - strand, within CA264_16655 at 3872.728 kb on - strand, within CA264_16655 at 3872.739 kb on - strand, within CA264_16655 at 3872.803 kb on - strand, within CA264_16655 at 3872.839 kb on + strand, within CA264_16655 at 3872.840 kb on - strand, within CA264_16655 at 3872.865 kb on + strand, within CA264_16655 at 3872.889 kb on - strand, within CA264_16655 at 3872.937 kb on + strand at 3872.938 kb on - strand at 3872.938 kb on - strand at 3872.973 kb on + strand at 3873.062 kb on + strand at 3873.073 kb on + strand at 3873.073 kb on + strand at 3873.084 kb on - strand at 3873.103 kb on + strand at 3873.103 kb on + strand at 3873.103 kb on + strand at 3873.103 kb on + strand at 3873.104 kb on - strand at 3873.104 kb on - strand at 3873.110 kb on - strand at 3873.172 kb on + strand at 3873.253 kb on + strand at 3873.302 kb on + strand at 3873.303 kb on - strand at 3873.303 kb on - strand at 3873.364 kb on + strand, within CA264_16660 at 3873.569 kb on - strand, within CA264_16660 at 3873.805 kb on + strand at 3873.805 kb on + strand at 3873.806 kb on - strand at 3873.806 kb on - strand at 3873.970 kb on - strand at 3873.971 kb on + strand at 3873.972 kb on - strand at 3873.972 kb on - strand at 3873.972 kb on - strand at 3873.995 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 3,870,421 + CA264_16645 0.61 -0.2 3,870,421 + CA264_16645 0.61 +0.9 3,870,483 + CA264_16645 0.66 +0.5 3,870,484 - CA264_16645 0.66 -0.0 3,870,486 - CA264_16645 0.66 +0.2 3,870,614 + CA264_16645 0.76 -0.4 3,870,691 - CA264_16645 0.82 +1.3 3,870,708 + CA264_16645 0.83 +3.2 3,870,764 - CA264_16645 0.87 +0.5 3,870,802 + +1.6 3,870,803 - +1.9 3,870,836 - +0.1 3,870,894 + -0.1 3,870,895 - +1.0 3,870,922 + +0.7 3,870,922 + +0.3 3,870,922 + +2.6 3,870,923 - +0.5 3,870,926 - +2.4 3,870,967 + +0.6 3,870,973 - +0.4 3,871,028 + -0.8 3,871,035 + +1.6 3,871,078 - CA264_16650 0.22 +1.6 3,871,078 - CA264_16650 0.22 +0.6 3,871,078 - CA264_16650 0.22 +0.1 3,871,100 + CA264_16650 0.28 +0.0 3,871,101 - CA264_16650 0.28 +0.5 3,871,103 + CA264_16650 0.29 -0.5 3,871,104 - CA264_16650 0.29 +0.5 3,871,105 + CA264_16650 0.29 +0.3 3,871,135 + CA264_16650 0.37 -0.5 3,871,135 + CA264_16650 0.37 -0.6 3,871,166 + CA264_16650 0.46 +1.8 3,871,166 + CA264_16650 0.46 +0.7 3,871,167 - CA264_16650 0.46 -0.2 3,871,170 + CA264_16650 0.47 +1.5 3,871,233 - CA264_16650 0.64 +1.4 3,871,233 - CA264_16650 0.64 -0.4 3,871,233 - CA264_16650 0.64 +1.4 3,871,248 + CA264_16650 0.69 -0.0 3,871,248 + CA264_16650 0.69 +1.3 3,871,267 - CA264_16650 0.74 -0.3 3,871,269 - CA264_16650 0.74 +0.9 3,871,290 + CA264_16650 0.80 +0.1 3,871,298 + CA264_16650 0.82 +1.1 3,871,298 + CA264_16650 0.82 +0.4 3,871,300 + CA264_16650 0.83 +0.8 3,871,301 - CA264_16650 0.83 -0.6 3,871,301 - CA264_16650 0.83 +0.3 3,871,301 - CA264_16650 0.83 -0.3 3,871,329 - +1.6 3,871,331 - -0.7 3,871,361 + +1.4 3,871,364 + +0.8 3,871,364 + +0.6 3,871,364 + -1.4 3,871,364 + +0.4 3,871,365 - -0.6 3,871,367 - +0.1 3,871,367 - +0.2 3,871,494 - +1.3 3,871,535 - -0.2 3,871,595 - CA264_16655 0.11 +0.7 3,871,688 + CA264_16655 0.17 +0.6 3,871,693 + CA264_16655 0.17 +1.5 3,871,694 - CA264_16655 0.17 +0.1 3,871,715 - CA264_16655 0.19 +0.9 3,871,715 - CA264_16655 0.19 +0.3 3,871,715 - CA264_16655 0.19 +2.9 3,871,725 - CA264_16655 0.19 +0.4 3,871,725 - CA264_16655 0.19 -0.6 3,871,888 + CA264_16655 0.29 +0.9 3,871,889 - CA264_16655 0.29 +0.8 3,872,001 + CA264_16655 0.36 +0.6 3,872,017 + CA264_16655 0.37 -0.0 3,872,021 + CA264_16655 0.37 -0.7 3,872,022 - CA264_16655 0.37 -0.4 3,872,043 - CA264_16655 0.38 -1.6 3,872,071 + CA264_16655 0.40 +0.0 3,872,072 - CA264_16655 0.40 +0.7 3,872,135 + CA264_16655 0.44 +1.2 3,872,171 - CA264_16655 0.46 +0.3 3,872,251 + CA264_16655 0.51 +0.7 3,872,252 - CA264_16655 0.51 -1.0 3,872,296 - CA264_16655 0.54 +1.3 3,872,321 + CA264_16655 0.55 +0.5 3,872,321 + CA264_16655 0.55 -0.8 3,872,323 + CA264_16655 0.55 +0.7 3,872,324 - CA264_16655 0.55 -0.4 3,872,443 + CA264_16655 0.63 +0.1 3,872,444 - CA264_16655 0.63 +0.2 3,872,502 - CA264_16655 0.66 -0.8 3,872,613 - CA264_16655 0.73 -0.1 3,872,613 - CA264_16655 0.73 -1.0 3,872,623 + CA264_16655 0.74 +0.1 3,872,624 - CA264_16655 0.74 -0.2 3,872,662 - CA264_16655 0.76 +0.3 3,872,672 + CA264_16655 0.77 +0.2 3,872,713 - CA264_16655 0.79 -0.2 3,872,728 - CA264_16655 0.80 +0.4 3,872,739 - CA264_16655 0.81 +1.4 3,872,803 - CA264_16655 0.85 +0.8 3,872,839 + CA264_16655 0.87 +0.3 3,872,840 - CA264_16655 0.87 +0.0 3,872,865 + CA264_16655 0.88 -0.4 3,872,889 - CA264_16655 0.90 +0.8 3,872,937 + +0.5 3,872,938 - +0.3 3,872,938 - -0.1 3,872,973 + -0.1 3,873,062 + +0.3 3,873,073 + +0.3 3,873,073 + +0.2 3,873,084 - +0.1 3,873,103 + -0.1 3,873,103 + -0.1 3,873,103 + +0.6 3,873,103 + +1.6 3,873,104 - +0.4 3,873,104 - +0.9 3,873,110 - +0.1 3,873,172 + +0.1 3,873,253 + -0.1 3,873,302 + -0.4 3,873,303 - -1.5 3,873,303 - +0.7 3,873,364 + CA264_16660 0.13 +0.0 3,873,569 - CA264_16660 0.54 +1.1 3,873,805 + -0.8 3,873,805 + -0.2 3,873,806 - -1.1 3,873,806 - -0.9 3,873,970 - -0.1 3,873,971 + -0.5 3,873,972 - +0.2 3,873,972 - +0.7 3,873,972 - +0.3 3,873,995 - +0.2
Or see this region's nucleotide sequence