Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_16370 and CA264_16375 are separated by 230 nucleotides CA264_16375 and CA264_16380 are separated by 164 nucleotides
CA264_16370: CA264_16370 - gliding motility lipoprotein GldK, at 3,809,911 to 3,810,927
_16370
CA264_16375: CA264_16375 - hypothetical protein, at 3,811,158 to 3,812,120
_16375
CA264_16380: CA264_16380 - uroporphyrinogen-III synthase, at 3,812,285 to 3,813,088
_16380
Position (kb)
3811
3812
3813 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3810.195 kb on - strand, within CA264_16370 at 3810.213 kb on + strand, within CA264_16370 at 3810.215 kb on + strand, within CA264_16370 at 3810.236 kb on + strand, within CA264_16370 at 3810.322 kb on - strand, within CA264_16370 at 3810.344 kb on + strand, within CA264_16370 at 3810.345 kb on - strand, within CA264_16370 at 3810.510 kb on - strand, within CA264_16370 at 3810.512 kb on + strand, within CA264_16370 at 3810.513 kb on - strand, within CA264_16370 at 3810.540 kb on - strand, within CA264_16370 at 3810.545 kb on + strand, within CA264_16370 at 3810.567 kb on + strand, within CA264_16370 at 3810.697 kb on - strand, within CA264_16370 at 3810.708 kb on + strand, within CA264_16370 at 3810.913 kb on - strand at 3810.917 kb on - strand at 3810.937 kb on + strand at 3810.995 kb on - strand at 3811.059 kb on + strand at 3811.071 kb on + strand at 3811.105 kb on + strand at 3811.147 kb on + strand at 3811.229 kb on - strand at 3811.240 kb on - strand at 3811.369 kb on + strand, within CA264_16375 at 3811.370 kb on - strand, within CA264_16375 at 3811.573 kb on + strand, within CA264_16375 at 3811.631 kb on - strand, within CA264_16375 at 3811.673 kb on + strand, within CA264_16375 at 3811.674 kb on - strand, within CA264_16375 at 3811.675 kb on + strand, within CA264_16375 at 3811.676 kb on - strand, within CA264_16375 at 3811.795 kb on + strand, within CA264_16375 at 3811.796 kb on - strand, within CA264_16375 at 3811.836 kb on - strand, within CA264_16375 at 3811.963 kb on + strand, within CA264_16375 at 3811.965 kb on + strand, within CA264_16375 at 3811.965 kb on + strand, within CA264_16375 at 3811.965 kb on + strand, within CA264_16375 at 3811.966 kb on - strand, within CA264_16375 at 3811.966 kb on - strand, within CA264_16375 at 3811.966 kb on - strand, within CA264_16375 at 3812.100 kb on + strand at 3812.101 kb on - strand at 3812.166 kb on + strand at 3812.166 kb on + strand at 3812.166 kb on + strand at 3812.166 kb on + strand at 3812.166 kb on + strand at 3812.167 kb on - strand at 3812.180 kb on - strand at 3812.180 kb on - strand at 3812.181 kb on + strand at 3812.181 kb on + strand at 3812.185 kb on + strand at 3812.185 kb on + strand at 3812.186 kb on - strand at 3812.244 kb on + strand at 3812.245 kb on - strand at 3812.248 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 3,810,195 - CA264_16370 0.28 -2.1 3,810,213 + CA264_16370 0.30 +0.3 3,810,215 + CA264_16370 0.30 -3.6 3,810,236 + CA264_16370 0.32 +0.0 3,810,322 - CA264_16370 0.40 +0.9 3,810,344 + CA264_16370 0.43 +1.1 3,810,345 - CA264_16370 0.43 -0.1 3,810,510 - CA264_16370 0.59 -1.0 3,810,512 + CA264_16370 0.59 -0.6 3,810,513 - CA264_16370 0.59 +1.6 3,810,540 - CA264_16370 0.62 -0.0 3,810,545 + CA264_16370 0.62 +1.4 3,810,567 + CA264_16370 0.65 +0.2 3,810,697 - CA264_16370 0.77 +2.7 3,810,708 + CA264_16370 0.78 +1.2 3,810,913 - +0.6 3,810,917 - -0.3 3,810,937 + +1.5 3,810,995 - -0.0 3,811,059 + +0.4 3,811,071 + -0.9 3,811,105 + +0.3 3,811,147 + -0.6 3,811,229 - +0.2 3,811,240 - +0.7 3,811,369 + CA264_16375 0.22 +0.2 3,811,370 - CA264_16375 0.22 +0.3 3,811,573 + CA264_16375 0.43 +0.3 3,811,631 - CA264_16375 0.49 +1.5 3,811,673 + CA264_16375 0.53 -1.4 3,811,674 - CA264_16375 0.54 -0.0 3,811,675 + CA264_16375 0.54 -1.5 3,811,676 - CA264_16375 0.54 +0.3 3,811,795 + CA264_16375 0.66 +0.2 3,811,796 - CA264_16375 0.66 -0.2 3,811,836 - CA264_16375 0.70 -0.3 3,811,963 + CA264_16375 0.84 -1.4 3,811,965 + CA264_16375 0.84 -0.9 3,811,965 + CA264_16375 0.84 -0.3 3,811,965 + CA264_16375 0.84 -0.6 3,811,966 - CA264_16375 0.84 -0.6 3,811,966 - CA264_16375 0.84 -1.1 3,811,966 - CA264_16375 0.84 -0.6 3,812,100 + -1.0 3,812,101 - +0.4 3,812,166 + +0.1 3,812,166 + -0.3 3,812,166 + -1.3 3,812,166 + -0.6 3,812,166 + -0.8 3,812,167 - +0.2 3,812,180 - +0.3 3,812,180 - +1.3 3,812,181 + -0.4 3,812,181 + -1.4 3,812,185 + -0.0 3,812,185 + -0.5 3,812,186 - +0.7 3,812,244 + -0.5 3,812,245 - -0.3 3,812,248 - -1.6
Or see this region's nucleotide sequence