Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_16230 and CA264_16235 are separated by 80 nucleotides CA264_16235 and CA264_16240 are separated by 121 nucleotides CA264_16240 and CA264_16245 are separated by 151 nucleotides
CA264_16230: CA264_16230 - protease, at 3,776,806 to 3,777,363
_16230
CA264_16235: CA264_16235 - hypothetical protein, at 3,777,444 to 3,777,986
_16235
CA264_16240: CA264_16240 - hypothetical protein, at 3,778,108 to 3,778,827
_16240
CA264_16245: CA264_16245 - hypothetical protein, at 3,778,979 to 3,779,602
_16245
Position (kb)
3778
3779 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3777.260 kb on + strand, within CA264_16230 at 3777.261 kb on - strand, within CA264_16230 at 3777.261 kb on - strand, within CA264_16230 at 3777.261 kb on - strand, within CA264_16230 at 3777.385 kb on - strand at 3777.390 kb on - strand at 3777.436 kb on + strand at 3777.441 kb on + strand at 3777.441 kb on + strand at 3777.441 kb on + strand at 3777.441 kb on + strand at 3777.442 kb on - strand at 3777.450 kb on + strand at 3777.601 kb on + strand, within CA264_16235 at 3777.646 kb on + strand, within CA264_16235 at 3777.662 kb on - strand, within CA264_16235 at 3777.676 kb on + strand, within CA264_16235 at 3777.676 kb on + strand, within CA264_16235 at 3777.676 kb on + strand, within CA264_16235 at 3777.677 kb on - strand, within CA264_16235 at 3777.677 kb on - strand, within CA264_16235 at 3777.678 kb on + strand, within CA264_16235 at 3777.678 kb on + strand, within CA264_16235 at 3777.679 kb on - strand, within CA264_16235 at 3777.727 kb on + strand, within CA264_16235 at 3777.791 kb on - strand, within CA264_16235 at 3777.821 kb on + strand, within CA264_16235 at 3777.844 kb on - strand, within CA264_16235 at 3777.844 kb on - strand, within CA264_16235 at 3777.844 kb on - strand, within CA264_16235 at 3777.844 kb on - strand, within CA264_16235 at 3777.990 kb on + strand at 3777.991 kb on - strand at 3777.991 kb on - strand at 3777.991 kb on - strand at 3777.991 kb on - strand at 3777.993 kb on + strand at 3778.039 kb on + strand at 3778.165 kb on - strand at 3778.196 kb on + strand, within CA264_16240 at 3778.267 kb on + strand, within CA264_16240 at 3778.512 kb on + strand, within CA264_16240 at 3778.605 kb on + strand, within CA264_16240 at 3778.638 kb on + strand, within CA264_16240 at 3778.810 kb on + strand at 3778.843 kb on + strand at 3778.853 kb on - strand at 3778.862 kb on + strand at 3778.862 kb on + strand at 3778.873 kb on - strand at 3778.901 kb on + strand at 3778.902 kb on - strand at 3778.999 kb on - strand at 3779.000 kb on + strand at 3779.000 kb on + strand at 3779.001 kb on - strand at 3779.086 kb on - strand, within CA264_16245 at 3779.102 kb on - strand, within CA264_16245 at 3779.157 kb on + strand, within CA264_16245 at 3779.158 kb on - strand, within CA264_16245 at 3779.171 kb on + strand, within CA264_16245 at 3779.171 kb on + strand, within CA264_16245 at 3779.233 kb on + strand, within CA264_16245 at 3779.234 kb on - strand, within CA264_16245 at 3779.411 kb on + strand, within CA264_16245 at 3779.411 kb on + strand, within CA264_16245 at 3779.471 kb on + strand, within CA264_16245 at 3779.472 kb on - strand, within CA264_16245 at 3779.472 kb on - strand, within CA264_16245 at 3779.523 kb on - strand, within CA264_16245 at 3779.567 kb on + strand at 3779.567 kb on + strand at 3779.568 kb on - strand at 3779.576 kb on - strand at 3779.587 kb on + strand at 3779.588 kb on - strand at 3779.588 kb on - strand at 3779.588 kb on - strand at 3779.603 kb on - strand at 3779.603 kb on - strand at 3779.631 kb on + strand at 3779.652 kb on - strand at 3779.660 kb on + strand at 3779.669 kb on + strand at 3779.675 kb on + strand at 3779.675 kb on + strand at 3779.676 kb on - strand at 3779.735 kb on + strand at 3779.735 kb on + strand at 3779.736 kb on - strand at 3779.765 kb on - strand at 3779.781 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 3,777,260 + CA264_16230 0.81 -1.1 3,777,261 - CA264_16230 0.82 +0.3 3,777,261 - CA264_16230 0.82 +0.4 3,777,261 - CA264_16230 0.82 -0.1 3,777,385 - +0.8 3,777,390 - +0.8 3,777,436 + -0.5 3,777,441 + -0.5 3,777,441 + +0.6 3,777,441 + -0.9 3,777,441 + -0.3 3,777,442 - -0.3 3,777,450 + -0.8 3,777,601 + CA264_16235 0.29 +0.2 3,777,646 + CA264_16235 0.37 +0.1 3,777,662 - CA264_16235 0.40 -0.0 3,777,676 + CA264_16235 0.43 -1.0 3,777,676 + CA264_16235 0.43 -0.6 3,777,676 + CA264_16235 0.43 -2.8 3,777,677 - CA264_16235 0.43 -0.1 3,777,677 - CA264_16235 0.43 -1.1 3,777,678 + CA264_16235 0.43 -0.0 3,777,678 + CA264_16235 0.43 -1.4 3,777,679 - CA264_16235 0.43 +0.6 3,777,727 + CA264_16235 0.52 +0.3 3,777,791 - CA264_16235 0.64 -2.2 3,777,821 + CA264_16235 0.69 -0.8 3,777,844 - CA264_16235 0.74 -0.2 3,777,844 - CA264_16235 0.74 -1.0 3,777,844 - CA264_16235 0.74 +0.6 3,777,844 - CA264_16235 0.74 +0.2 3,777,990 + -0.0 3,777,991 - -0.4 3,777,991 - -0.9 3,777,991 - -0.9 3,777,991 - -0.3 3,777,993 + -0.5 3,778,039 + +0.6 3,778,165 - -0.9 3,778,196 + CA264_16240 0.12 -0.1 3,778,267 + CA264_16240 0.22 -1.4 3,778,512 + CA264_16240 0.56 -0.4 3,778,605 + CA264_16240 0.69 -0.2 3,778,638 + CA264_16240 0.74 -1.0 3,778,810 + +0.9 3,778,843 + +0.4 3,778,853 - -0.8 3,778,862 + +2.2 3,778,862 + -0.5 3,778,873 - -0.1 3,778,901 + +0.6 3,778,902 - -0.5 3,778,999 - +0.1 3,779,000 + +1.6 3,779,000 + +0.7 3,779,001 - +0.7 3,779,086 - CA264_16245 0.17 -0.7 3,779,102 - CA264_16245 0.20 -0.1 3,779,157 + CA264_16245 0.29 -0.8 3,779,158 - CA264_16245 0.29 -0.8 3,779,171 + CA264_16245 0.31 -0.4 3,779,171 + CA264_16245 0.31 -0.4 3,779,233 + CA264_16245 0.41 +0.0 3,779,234 - CA264_16245 0.41 -1.3 3,779,411 + CA264_16245 0.69 +0.3 3,779,411 + CA264_16245 0.69 +0.3 3,779,471 + CA264_16245 0.79 -0.0 3,779,472 - CA264_16245 0.79 -0.0 3,779,472 - CA264_16245 0.79 -0.3 3,779,523 - CA264_16245 0.87 -0.6 3,779,567 + +1.6 3,779,567 + -0.3 3,779,568 - -0.5 3,779,576 - +0.6 3,779,587 + +0.7 3,779,588 - +0.2 3,779,588 - -0.9 3,779,588 - -0.7 3,779,603 - -0.2 3,779,603 - -0.1 3,779,631 + +0.4 3,779,652 - -0.5 3,779,660 + -0.5 3,779,669 + +1.6 3,779,675 + -0.4 3,779,675 + +0.5 3,779,676 - +0.2 3,779,735 + -0.2 3,779,735 + +1.6 3,779,736 - -0.5 3,779,765 - +0.4 3,779,781 - -0.0
Or see this region's nucleotide sequence