Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_15190 and CA264_15195 overlap by 11 nucleotides CA264_15195 and CA264_15200 are separated by 45 nucleotides CA264_15200 and CA264_15205 are separated by 104 nucleotides
CA264_15190: CA264_15190 - hypothetical protein, at 3,559,316 to 3,559,573
_15190
CA264_15195: CA264_15195 - phosphate ABC transporter substrate-binding protein, PhoT family, at 3,559,563 to 3,560,504
_15195
CA264_15200: CA264_15200 - hypothetical protein, at 3,560,550 to 3,562,193
_15200
CA264_15205: CA264_15205 - RNA pseudouridine synthase, at 3,562,298 to 3,563,332
_15205
Position (kb)
3560
3561
3562
3563 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3559.562 kb on + strand at 3559.563 kb on - strand at 3559.613 kb on - strand at 3559.735 kb on - strand, within CA264_15195 at 3559.916 kb on + strand, within CA264_15195 at 3560.102 kb on + strand, within CA264_15195 at 3560.102 kb on + strand, within CA264_15195 at 3560.103 kb on - strand, within CA264_15195 at 3560.103 kb on - strand, within CA264_15195 at 3560.103 kb on - strand, within CA264_15195 at 3560.103 kb on - strand, within CA264_15195 at 3560.129 kb on + strand, within CA264_15195 at 3560.154 kb on + strand, within CA264_15195 at 3560.155 kb on - strand, within CA264_15195 at 3560.320 kb on - strand, within CA264_15195 at 3560.358 kb on + strand, within CA264_15195 at 3560.359 kb on - strand, within CA264_15195 at 3560.409 kb on + strand, within CA264_15195 at 3560.410 kb on - strand at 3560.508 kb on + strand at 3560.515 kb on + strand at 3560.568 kb on + strand at 3560.676 kb on - strand at 3560.679 kb on + strand at 3560.679 kb on + strand at 3560.680 kb on - strand at 3560.680 kb on - strand at 3560.682 kb on - strand at 3560.697 kb on - strand at 3560.739 kb on - strand, within CA264_15200 at 3560.926 kb on + strand, within CA264_15200 at 3560.949 kb on + strand, within CA264_15200 at 3561.050 kb on - strand, within CA264_15200 at 3561.135 kb on + strand, within CA264_15200 at 3561.147 kb on + strand, within CA264_15200 at 3561.169 kb on - strand, within CA264_15200 at 3561.270 kb on + strand, within CA264_15200 at 3561.271 kb on - strand, within CA264_15200 at 3561.274 kb on - strand, within CA264_15200 at 3561.323 kb on - strand, within CA264_15200 at 3561.565 kb on - strand, within CA264_15200 at 3561.699 kb on - strand, within CA264_15200 at 3561.717 kb on - strand, within CA264_15200 at 3561.735 kb on - strand, within CA264_15200 at 3561.769 kb on - strand, within CA264_15200 at 3561.769 kb on - strand, within CA264_15200 at 3561.771 kb on + strand, within CA264_15200 at 3561.774 kb on + strand, within CA264_15200 at 3561.782 kb on + strand, within CA264_15200 at 3561.789 kb on + strand, within CA264_15200 at 3561.789 kb on + strand, within CA264_15200 at 3561.790 kb on - strand, within CA264_15200 at 3561.791 kb on + strand, within CA264_15200 at 3561.792 kb on - strand, within CA264_15200 at 3561.871 kb on - strand, within CA264_15200 at 3561.901 kb on - strand, within CA264_15200 at 3561.907 kb on - strand, within CA264_15200 at 3561.979 kb on - strand, within CA264_15200 at 3561.982 kb on - strand, within CA264_15200 at 3562.063 kb on - strand at 3562.066 kb on - strand at 3562.066 kb on - strand at 3562.072 kb on - strand at 3562.209 kb on - strand at 3562.209 kb on - strand at 3562.213 kb on + strand at 3562.316 kb on + strand at 3562.470 kb on + strand, within CA264_15205 at 3562.512 kb on + strand, within CA264_15205 at 3562.513 kb on - strand, within CA264_15205 at 3562.612 kb on - strand, within CA264_15205 at 3562.612 kb on - strand, within CA264_15205 at 3562.677 kb on - strand, within CA264_15205 at 3562.723 kb on + strand, within CA264_15205 at 3562.767 kb on + strand, within CA264_15205 at 3562.770 kb on + strand, within CA264_15205 at 3562.770 kb on + strand, within CA264_15205 at 3562.950 kb on - strand, within CA264_15205 at 3562.969 kb on + strand, within CA264_15205 at 3562.971 kb on + strand, within CA264_15205 at 3562.972 kb on - strand, within CA264_15205 at 3563.121 kb on - strand, within CA264_15205 at 3563.186 kb on + strand, within CA264_15205 at 3563.186 kb on + strand, within CA264_15205 at 3563.187 kb on - strand, within CA264_15205
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 3,559,562 + +0.8 3,559,563 - -0.0 3,559,613 - -1.3 3,559,735 - CA264_15195 0.18 +0.5 3,559,916 + CA264_15195 0.37 +1.0 3,560,102 + CA264_15195 0.57 -0.4 3,560,102 + CA264_15195 0.57 -1.1 3,560,103 - CA264_15195 0.57 -0.5 3,560,103 - CA264_15195 0.57 -2.0 3,560,103 - CA264_15195 0.57 +0.2 3,560,103 - CA264_15195 0.57 -0.0 3,560,129 + CA264_15195 0.60 -1.9 3,560,154 + CA264_15195 0.63 +0.4 3,560,155 - CA264_15195 0.63 +1.3 3,560,320 - CA264_15195 0.80 -0.8 3,560,358 + CA264_15195 0.84 -0.2 3,560,359 - CA264_15195 0.85 -0.3 3,560,409 + CA264_15195 0.90 -1.9 3,560,410 - -1.2 3,560,508 + +1.0 3,560,515 + +1.0 3,560,568 + -0.7 3,560,676 - -3.5 3,560,679 + +0.3 3,560,679 + -2.4 3,560,680 - -1.4 3,560,680 - -2.2 3,560,682 - -1.6 3,560,697 - -0.3 3,560,739 - CA264_15200 0.11 -1.0 3,560,926 + CA264_15200 0.23 -1.2 3,560,949 + CA264_15200 0.24 -0.8 3,561,050 - CA264_15200 0.30 -2.2 3,561,135 + CA264_15200 0.36 -2.2 3,561,147 + CA264_15200 0.36 -0.2 3,561,169 - CA264_15200 0.38 -0.4 3,561,270 + CA264_15200 0.44 -1.7 3,561,271 - CA264_15200 0.44 -1.7 3,561,274 - CA264_15200 0.44 -1.1 3,561,323 - CA264_15200 0.47 -1.7 3,561,565 - CA264_15200 0.62 -1.5 3,561,699 - CA264_15200 0.70 -0.0 3,561,717 - CA264_15200 0.71 -1.6 3,561,735 - CA264_15200 0.72 -0.6 3,561,769 - CA264_15200 0.74 -1.7 3,561,769 - CA264_15200 0.74 -1.1 3,561,771 + CA264_15200 0.74 -1.3 3,561,774 + CA264_15200 0.74 -1.5 3,561,782 + CA264_15200 0.75 -0.7 3,561,789 + CA264_15200 0.75 -2.1 3,561,789 + CA264_15200 0.75 -1.4 3,561,790 - CA264_15200 0.75 -1.6 3,561,791 + CA264_15200 0.75 -0.9 3,561,792 - CA264_15200 0.76 -0.2 3,561,871 - CA264_15200 0.80 -3.3 3,561,901 - CA264_15200 0.82 -1.3 3,561,907 - CA264_15200 0.83 -1.6 3,561,979 - CA264_15200 0.87 -0.5 3,561,982 - CA264_15200 0.87 -1.4 3,562,063 - +0.2 3,562,066 - -0.6 3,562,066 - -1.6 3,562,072 - -3.3 3,562,209 - -0.5 3,562,209 - -0.4 3,562,213 + -0.4 3,562,316 + +2.2 3,562,470 + CA264_15205 0.17 -1.1 3,562,512 + CA264_15205 0.21 -1.1 3,562,513 - CA264_15205 0.21 -0.0 3,562,612 - CA264_15205 0.30 -2.1 3,562,612 - CA264_15205 0.30 -2.4 3,562,677 - CA264_15205 0.37 -0.5 3,562,723 + CA264_15205 0.41 -2.0 3,562,767 + CA264_15205 0.45 -2.7 3,562,770 + CA264_15205 0.46 -0.6 3,562,770 + CA264_15205 0.46 -0.4 3,562,950 - CA264_15205 0.63 -1.0 3,562,969 + CA264_15205 0.65 -1.3 3,562,971 + CA264_15205 0.65 -2.1 3,562,972 - CA264_15205 0.65 -2.3 3,563,121 - CA264_15205 0.80 -1.6 3,563,186 + CA264_15205 0.86 -2.3 3,563,186 + CA264_15205 0.86 -2.2 3,563,187 - CA264_15205 0.86 +0.6
Or see this region's nucleotide sequence