Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_14900

Experiment: m.b. Thallium(I) acetate 0.001 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_14900 and CA264_14905 are separated by 494 nucleotides CA264_14900: CA264_14900 - uvrA paralog in Bacteroidetes (from data), at 3,501,208 to 3,504,015 _14900 CA264_14905: CA264_14905 - hypothetical protein, at 3,504,510 to 3,505,532 _14905 Position (kb) 3501 3502 3503 3504 3505Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 3500.214 kb on + strandat 3500.228 kb on + strandat 3500.272 kb on + strandat 3500.273 kb on - strandat 3500.274 kb on + strandat 3500.275 kb on - strandat 3500.286 kb on + strandat 3500.286 kb on + strandat 3500.293 kb on + strandat 3500.299 kb on - strandat 3500.313 kb on + strandat 3500.314 kb on - strandat 3500.314 kb on - strandat 3500.329 kb on - strandat 3500.359 kb on + strandat 3500.359 kb on + strandat 3500.360 kb on - strandat 3500.360 kb on - strandat 3500.420 kb on - strandat 3500.430 kb on + strandat 3500.434 kb on + strandat 3500.434 kb on + strandat 3500.435 kb on - strandat 3500.435 kb on - strandat 3500.440 kb on + strandat 3500.479 kb on - strandat 3500.484 kb on - strandat 3500.500 kb on + strandat 3500.501 kb on - strandat 3500.501 kb on - strandat 3500.501 kb on - strandat 3500.501 kb on - strandat 3500.505 kb on + strandat 3500.532 kb on + strandat 3500.532 kb on + strandat 3500.532 kb on + strandat 3500.533 kb on - strandat 3500.533 kb on - strandat 3500.533 kb on - strandat 3500.533 kb on - strandat 3500.533 kb on - strandat 3500.548 kb on - strandat 3500.573 kb on - strandat 3500.578 kb on - strandat 3500.622 kb on + strandat 3500.622 kb on + strandat 3500.650 kb on + strandat 3500.654 kb on + strandat 3500.663 kb on - strandat 3500.673 kb on - strandat 3500.677 kb on + strandat 3500.677 kb on + strandat 3500.752 kb on + strandat 3500.753 kb on - strandat 3500.773 kb on - strandat 3500.782 kb on + strandat 3500.805 kb on - strandat 3500.889 kb on - strandat 3500.911 kb on + strandat 3500.967 kb on - strandat 3500.979 kb on - strandat 3500.982 kb on + strandat 3500.983 kb on - strandat 3500.985 kb on - strandat 3500.986 kb on + strandat 3500.986 kb on + strandat 3500.987 kb on - strandat 3501.026 kb on + strandat 3501.050 kb on + strandat 3501.084 kb on - strandat 3501.108 kb on - strandat 3501.154 kb on + strandat 3501.154 kb on + strandat 3501.155 kb on - strandat 3501.156 kb on + strandat 3501.157 kb on - strandat 3501.157 kb on - strandat 3501.157 kb on - strandat 3501.158 kb on + strandat 3501.198 kb on + strandat 3501.200 kb on + strandat 3501.201 kb on - strandat 3501.325 kb on + strandat 3501.381 kb on + strandat 3501.582 kb on - strand, within CA264_14900at 3501.775 kb on - strand, within CA264_14900at 3501.814 kb on + strand, within CA264_14900at 3501.903 kb on + strand, within CA264_14900at 3501.930 kb on - strand, within CA264_14900at 3501.930 kb on - strand, within CA264_14900at 3502.005 kb on - strand, within CA264_14900at 3502.483 kb on + strand, within CA264_14900at 3502.486 kb on - strand, within CA264_14900at 3502.486 kb on - strand, within CA264_14900at 3502.486 kb on - strand, within CA264_14900at 3502.486 kb on - strand, within CA264_14900at 3502.540 kb on - strand, within CA264_14900at 3502.629 kb on - strand, within CA264_14900at 3502.674 kb on + strand, within CA264_14900at 3502.674 kb on + strand, within CA264_14900at 3502.718 kb on - strand, within CA264_14900at 3502.772 kb on - strand, within CA264_14900at 3502.772 kb on - strand, within CA264_14900at 3502.772 kb on - strand, within CA264_14900at 3502.775 kb on + strand, within CA264_14900at 3502.776 kb on - strand, within CA264_14900at 3502.916 kb on + strand, within CA264_14900at 3502.967 kb on + strand, within CA264_14900at 3503.070 kb on - strand, within CA264_14900at 3503.070 kb on - strand, within CA264_14900at 3503.111 kb on - strand, within CA264_14900at 3503.111 kb on - strand, within CA264_14900at 3503.167 kb on - strand, within CA264_14900at 3503.342 kb on + strand, within CA264_14900at 3503.365 kb on + strand, within CA264_14900at 3503.365 kb on + strand, within CA264_14900at 3503.366 kb on - strand, within CA264_14900at 3503.367 kb on + strand, within CA264_14900at 3503.368 kb on - strand, within CA264_14900at 3503.371 kb on + strand, within CA264_14900at 3503.418 kb on + strand, within CA264_14900at 3503.423 kb on + strand, within CA264_14900at 3503.423 kb on + strand, within CA264_14900at 3503.424 kb on - strand, within CA264_14900at 3503.425 kb on + strand, within CA264_14900at 3503.559 kb on + strand, within CA264_14900at 3503.593 kb on + strand, within CA264_14900at 3503.594 kb on - strand, within CA264_14900at 3503.597 kb on - strand, within CA264_14900at 3503.619 kb on - strand, within CA264_14900at 3503.655 kb on - strand, within CA264_14900at 3503.661 kb on - strand, within CA264_14900at 3503.701 kb on - strand, within CA264_14900at 3503.707 kb on + strand, within CA264_14900at 3503.708 kb on - strand, within CA264_14900at 3503.816 kb on + strandat 3503.956 kb on + strandat 3503.958 kb on + strandat 3503.959 kb on - strandat 3503.959 kb on - strandat 3503.980 kb on + strandat 3504.015 kb on + strandat 3504.043 kb on + strandat 3504.044 kb on - strandat 3504.044 kb on - strandat 3504.046 kb on + strandat 3504.080 kb on + strandat 3504.088 kb on - strandat 3504.093 kb on + strandat 3504.093 kb on + strandat 3504.100 kb on - strandat 3504.103 kb on + strandat 3504.134 kb on - strandat 3504.197 kb on - strandat 3504.197 kb on - strandat 3504.240 kb on - strandat 3504.250 kb on + strandat 3504.306 kb on - strandat 3504.307 kb on + strandat 3504.307 kb on + strandat 3504.307 kb on + strandat 3504.308 kb on - strandat 3504.505 kb on + strandat 3504.521 kb on + strandat 3504.522 kb on - strandat 3504.530 kb on + strandat 3504.530 kb on + strandat 3504.530 kb on + strandat 3504.531 kb on - strandat 3504.542 kb on - strandat 3504.609 kb on + strandat 3504.623 kb on + strand, within CA264_14905at 3504.676 kb on + strand, within CA264_14905at 3504.723 kb on - strand, within CA264_14905at 3504.723 kb on - strand, within CA264_14905

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml
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3,500,214 + -0.1
3,500,228 + -0.7
3,500,272 + +0.0
3,500,273 - -0.1
3,500,274 + +0.8
3,500,275 - +0.3
3,500,286 + +0.1
3,500,286 + -0.5
3,500,293 + -0.2
3,500,299 - +0.9
3,500,313 + -0.5
3,500,314 - +1.1
3,500,314 - +2.1
3,500,329 - -0.4
3,500,359 + -0.2
3,500,359 + -0.2
3,500,360 - +0.1
3,500,360 - +0.2
3,500,420 - -0.0
3,500,430 + -0.1
3,500,434 + -0.6
3,500,434 + +0.5
3,500,435 - +0.1
3,500,435 - -0.3
3,500,440 + +0.4
3,500,479 - -0.2
3,500,484 - +0.4
3,500,500 + +0.7
3,500,501 - +1.8
3,500,501 - +0.6
3,500,501 - -0.3
3,500,501 - -0.4
3,500,505 + +0.0
3,500,532 + -1.0
3,500,532 + +0.3
3,500,532 + -3.0
3,500,533 - +0.6
3,500,533 - -0.0
3,500,533 - -0.0
3,500,533 - -0.4
3,500,533 - +0.8
3,500,548 - -0.1
3,500,573 - -0.1
3,500,578 - -1.2
3,500,622 + +0.1
3,500,622 + +0.7
3,500,650 + -0.6
3,500,654 + +0.2
3,500,663 - -1.5
3,500,673 - +1.1
3,500,677 + +0.1
3,500,677 + +0.2
3,500,752 + -0.5
3,500,753 - +0.9
3,500,773 - +0.3
3,500,782 + -0.0
3,500,805 - -0.1
3,500,889 - -0.1
3,500,911 + +0.4
3,500,967 - -0.1
3,500,979 - -0.7
3,500,982 + -0.1
3,500,983 - +0.4
3,500,985 - +0.5
3,500,986 + -0.2
3,500,986 + +0.1
3,500,987 - +0.0
3,501,026 + +0.6
3,501,050 + -0.4
3,501,084 - +0.2
3,501,108 - -1.0
3,501,154 + +0.8
3,501,154 + -0.4
3,501,155 - +0.1
3,501,156 + -0.4
3,501,157 - -0.7
3,501,157 - +0.9
3,501,157 - -0.8
3,501,158 + -0.1
3,501,198 + -1.6
3,501,200 + -0.6
3,501,201 - -2.2
3,501,325 + -0.9
3,501,381 + -0.8
3,501,582 - CA264_14900 0.13 -0.4
3,501,775 - CA264_14900 0.20 -0.9
3,501,814 + CA264_14900 0.22 -1.3
3,501,903 + CA264_14900 0.25 -0.9
3,501,930 - CA264_14900 0.26 -1.0
3,501,930 - CA264_14900 0.26 -0.7
3,502,005 - CA264_14900 0.28 -1.6
3,502,483 + CA264_14900 0.45 -1.0
3,502,486 - CA264_14900 0.46 -1.8
3,502,486 - CA264_14900 0.46 -1.0
3,502,486 - CA264_14900 0.46 -0.7
3,502,486 - CA264_14900 0.46 -0.8
3,502,540 - CA264_14900 0.47 -0.5
3,502,629 - CA264_14900 0.51 -1.6
3,502,674 + CA264_14900 0.52 -0.2
3,502,674 + CA264_14900 0.52 -0.9
3,502,718 - CA264_14900 0.54 -0.3
3,502,772 - CA264_14900 0.56 -0.5
3,502,772 - CA264_14900 0.56 -0.2
3,502,772 - CA264_14900 0.56 -0.6
3,502,775 + CA264_14900 0.56 -0.5
3,502,776 - CA264_14900 0.56 +0.9
3,502,916 + CA264_14900 0.61 -1.4
3,502,967 + CA264_14900 0.63 +0.9
3,503,070 - CA264_14900 0.66 -1.0
3,503,070 - CA264_14900 0.66 -0.8
3,503,111 - CA264_14900 0.68 -1.1
3,503,111 - CA264_14900 0.68 -2.3
3,503,167 - CA264_14900 0.70 -2.0
3,503,342 + CA264_14900 0.76 +0.1
3,503,365 + CA264_14900 0.77 -1.2
3,503,365 + CA264_14900 0.77 +0.5
3,503,366 - CA264_14900 0.77 -2.0
3,503,367 + CA264_14900 0.77 -2.6
3,503,368 - CA264_14900 0.77 -0.5
3,503,371 + CA264_14900 0.77 -0.1
3,503,418 + CA264_14900 0.79 -1.8
3,503,423 + CA264_14900 0.79 +0.5
3,503,423 + CA264_14900 0.79 -1.0
3,503,424 - CA264_14900 0.79 -0.4
3,503,425 + CA264_14900 0.79 -1.1
3,503,559 + CA264_14900 0.84 -1.2
3,503,593 + CA264_14900 0.85 -0.9
3,503,594 - CA264_14900 0.85 -2.7
3,503,597 - CA264_14900 0.85 -1.1
3,503,619 - CA264_14900 0.86 -0.3
3,503,655 - CA264_14900 0.87 -0.5
3,503,661 - CA264_14900 0.87 -0.6
3,503,701 - CA264_14900 0.89 -0.4
3,503,707 + CA264_14900 0.89 +0.1
3,503,708 - CA264_14900 0.89 -1.5
3,503,816 + -1.0
3,503,956 + -0.4
3,503,958 + -0.9
3,503,959 - -0.8
3,503,959 - -0.4
3,503,980 + +0.5
3,504,015 + -0.5
3,504,043 + +0.8
3,504,044 - -0.2
3,504,044 - -0.1
3,504,046 + +0.3
3,504,080 + -0.5
3,504,088 - +1.1
3,504,093 + +0.6
3,504,093 + +0.4
3,504,100 - -0.2
3,504,103 + +0.2
3,504,134 - -0.2
3,504,197 - +0.1
3,504,197 - -1.3
3,504,240 - -1.2
3,504,250 + +1.4
3,504,306 - +0.1
3,504,307 + +0.7
3,504,307 + +0.8
3,504,307 + +1.1
3,504,308 - -0.4
3,504,505 + -0.2
3,504,521 + +1.2
3,504,522 - +1.2
3,504,530 + -1.2
3,504,530 + -0.6
3,504,530 + +0.3
3,504,531 - -0.6
3,504,542 - -0.4
3,504,609 + -0.0
3,504,623 + CA264_14905 0.11 +0.8
3,504,676 + CA264_14905 0.16 +1.5
3,504,723 - CA264_14905 0.21 -0.9
3,504,723 - CA264_14905 0.21 -0.8

Or see this region's nucleotide sequence