Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_14870

Experiment: m.b. Thallium(I) acetate 0.001 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_14865 and CA264_14870 are separated by 100 nucleotidesCA264_14870 and CA264_14875 are separated by 146 nucleotides CA264_14865: CA264_14865 - peptidase dimerization domain protein, at 3,490,680 to 3,492,038 _14865 CA264_14870: CA264_14870 - acyl-phosphate glycerol 3-phosphate acyltransferase, at 3,492,139 to 3,492,786 _14870 CA264_14875: CA264_14875 - hypothetical protein, at 3,492,933 to 3,497,735 _14875 Position (kb) 3492 3493Strain fitness (log2 ratio) -2 -1 0 1 2at 3491.174 kb on + strand, within CA264_14865at 3491.191 kb on + strand, within CA264_14865at 3491.192 kb on - strand, within CA264_14865at 3491.234 kb on + strand, within CA264_14865at 3491.235 kb on - strand, within CA264_14865at 3491.237 kb on - strand, within CA264_14865at 3491.298 kb on + strand, within CA264_14865at 3491.299 kb on - strand, within CA264_14865at 3491.299 kb on - strand, within CA264_14865at 3491.299 kb on - strand, within CA264_14865at 3491.304 kb on - strand, within CA264_14865at 3491.308 kb on + strand, within CA264_14865at 3491.308 kb on + strand, within CA264_14865at 3491.442 kb on + strand, within CA264_14865at 3491.616 kb on - strand, within CA264_14865at 3491.674 kb on + strand, within CA264_14865at 3491.675 kb on - strand, within CA264_14865at 3491.675 kb on - strand, within CA264_14865at 3491.710 kb on + strand, within CA264_14865at 3491.711 kb on - strand, within CA264_14865at 3491.712 kb on + strand, within CA264_14865at 3491.712 kb on + strand, within CA264_14865at 3491.797 kb on + strand, within CA264_14865at 3491.878 kb on - strand, within CA264_14865at 3491.878 kb on - strand, within CA264_14865at 3491.878 kb on - strand, within CA264_14865at 3491.878 kb on - strand, within CA264_14865at 3492.036 kb on + strandat 3492.046 kb on + strandat 3492.046 kb on + strandat 3492.053 kb on + strandat 3492.117 kb on - strandat 3492.117 kb on - strandat 3492.124 kb on - strandat 3492.763 kb on + strandat 3492.769 kb on + strandat 3492.792 kb on + strandat 3492.793 kb on - strandat 3492.793 kb on - strandat 3492.873 kb on + strandat 3492.875 kb on + strandat 3492.904 kb on - strandat 3492.922 kb on - strandat 3492.934 kb on + strandat 3492.935 kb on - strandat 3492.937 kb on - strandat 3492.937 kb on - strandat 3493.013 kb on + strandat 3493.117 kb on + strandat 3493.171 kb on + strandat 3493.171 kb on + strandat 3493.171 kb on + strandat 3493.172 kb on - strandat 3493.180 kb on + strandat 3493.238 kb on + strandat 3493.239 kb on - strandat 3493.281 kb on - strandat 3493.316 kb on - strandat 3493.339 kb on + strandat 3493.340 kb on - strandat 3493.340 kb on - strandat 3493.544 kb on + strand, within CA264_14875at 3493.632 kb on + strand, within CA264_14875at 3493.632 kb on + strand, within CA264_14875at 3493.632 kb on + strand, within CA264_14875at 3493.633 kb on - strand, within CA264_14875at 3493.633 kb on - strand, within CA264_14875at 3493.735 kb on - strand, within CA264_14875at 3493.735 kb on - strand, within CA264_14875at 3493.764 kb on + strand, within CA264_14875

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml
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3,491,174 + CA264_14865 0.36 +1.1
3,491,191 + CA264_14865 0.38 +0.1
3,491,192 - CA264_14865 0.38 -0.4
3,491,234 + CA264_14865 0.41 +0.3
3,491,235 - CA264_14865 0.41 -0.6
3,491,237 - CA264_14865 0.41 +0.9
3,491,298 + CA264_14865 0.45 +0.7
3,491,299 - CA264_14865 0.46 +0.1
3,491,299 - CA264_14865 0.46 -0.3
3,491,299 - CA264_14865 0.46 -0.1
3,491,304 - CA264_14865 0.46 +1.0
3,491,308 + CA264_14865 0.46 +0.4
3,491,308 + CA264_14865 0.46 +0.2
3,491,442 + CA264_14865 0.56 +0.5
3,491,616 - CA264_14865 0.69 +0.5
3,491,674 + CA264_14865 0.73 -0.0
3,491,675 - CA264_14865 0.73 -0.2
3,491,675 - CA264_14865 0.73 +0.8
3,491,710 + CA264_14865 0.76 +1.9
3,491,711 - CA264_14865 0.76 -0.0
3,491,712 + CA264_14865 0.76 +0.5
3,491,712 + CA264_14865 0.76 +1.5
3,491,797 + CA264_14865 0.82 +0.6
3,491,878 - CA264_14865 0.88 +0.2
3,491,878 - CA264_14865 0.88 -0.7
3,491,878 - CA264_14865 0.88 +1.1
3,491,878 - CA264_14865 0.88 +0.3
3,492,036 + +1.0
3,492,046 + +1.9
3,492,046 + +0.9
3,492,053 + +1.2
3,492,117 - -1.5
3,492,117 - -0.7
3,492,124 - -0.3
3,492,763 + -2.0
3,492,769 + -0.5
3,492,792 + +0.1
3,492,793 - -0.0
3,492,793 - -0.3
3,492,873 + +0.6
3,492,875 + -1.5
3,492,904 - -0.9
3,492,922 - -0.7
3,492,934 + -1.2
3,492,935 - -0.8
3,492,937 - +1.9
3,492,937 - -1.1
3,493,013 + -0.4
3,493,117 + +0.6
3,493,171 + -0.7
3,493,171 + +0.6
3,493,171 + +0.9
3,493,172 - -1.6
3,493,180 + -0.1
3,493,238 + -0.0
3,493,239 - -1.2
3,493,281 - -0.5
3,493,316 - -1.0
3,493,339 + -0.1
3,493,340 - -0.9
3,493,340 - -0.8
3,493,544 + CA264_14875 0.13 +0.4
3,493,632 + CA264_14875 0.15 +0.5
3,493,632 + CA264_14875 0.15 -0.1
3,493,632 + CA264_14875 0.15 -1.4
3,493,633 - CA264_14875 0.15 -0.4
3,493,633 - CA264_14875 0.15 -0.8
3,493,735 - CA264_14875 0.17 -0.2
3,493,735 - CA264_14875 0.17 +0.1
3,493,764 + CA264_14875 0.17 -1.1

Or see this region's nucleotide sequence